RNA–Protein interactions for RNA: ENST00000518882.2

PCDHGA11-202, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDHGA11, Length 2,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-202ENST00000518882 ITGA1P56199 1179 aa16.05■□□□□ 0.16
PCDHGA11-202ENST00000518882 SMAD3P84022 425 aaKnown RBP16.05■□□□□ 0.16
PCDHGA11-202ENST00000518882 HSPA14Q0VDF9 509 aa16.05■□□□□ 0.16
PCDHGA11-202ENST00000518882 FADDQ13158 208 aa16.05■□□□□ 0.16
PCDHGA11-202ENST00000518882 EIF3MQ7L2H7 374 aaKnown RBP16.05■□□□□ 0.16
PCDHGA11-202ENST00000518882 CYP2U1Q7Z449 544 aa16.05■□□□□ 0.16
PCDHGA11-202ENST00000518882 PLD3Q8IV08 490 aa16.05■□□□□ 0.16
PCDHGA11-202ENST00000518882 L3MBTL4Q8NA19 623 aa16.05■□□□□ 0.16
PCDHGA11-202ENST00000518882 DCAF4L2Q8NA75 395 aa16.05■□□□□ 0.16
PCDHGA11-202ENST00000518882 SKA2Q8WVK7 121 aaPredicted RBP16.05■□□□□ 0.16
PCDHGA11-202ENST00000518882 UPF1Q92900 1129 aaKnown RBP eCLIP16.05■□□□□ 0.16
PCDHGA11-202ENST00000518882 TPD52L3Q96J77 140 aa16.05■□□□□ 0.16
PCDHGA11-202ENST00000518882 REEP1Q9H902 201 aa16.05■□□□□ 0.16
PCDHGA11-202ENST00000518882 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.05■□□□□ 0.16
PCDHGA11-202ENST00000518882 TMED5Q9Y3A6 229 aa16.05■□□□□ 0.16
PCDHGA11-202ENST00000518882 ZNF451Q9Y4E5 1061 aa16.05■□□□□ 0.16
PCDHGA11-202ENST00000518882 PCDHGA6Q9Y5G7 932 aa16.05■□□□□ 0.16
PCDHGA11-202ENST00000518882 MAGEB17A8MXT2 336 aa16.04■□□□□ 0.16
PCDHGA11-202ENST00000518882 EPN2O95208 641 aa16.04■□□□□ 0.16
PCDHGA11-202ENST00000518882 CPSF4O95639 269 aaKnown RBP16.04■□□□□ 0.16
PCDHGA11-202ENST00000518882 VIPP01282 170 aa16.04■□□□□ 0.16
PCDHGA11-202ENST00000518882 CBSLP0DN79 551 aa16.04■□□□□ 0.16
PCDHGA11-202ENST00000518882 MAPK1P28482 360 aa16.04■□□□□ 0.16
PCDHGA11-202ENST00000518882 C21orf33P30042 268 aaPredicted RBP16.04■□□□□ 0.16
PCDHGA11-202ENST00000518882 CBSP35520 551 aa16.04■□□□□ 0.16
PCDHGA11-202ENST00000518882 EIF2DP41214 584 aaKnown RBP16.04■□□□□ 0.16
PCDHGA11-202ENST00000518882 SLC13A2Q13183 592 aa16.04■□□□□ 0.16
PCDHGA11-202ENST00000518882 PLEKHG6Q3KR16 790 aa16.04■□□□□ 0.16
PCDHGA11-202ENST00000518882 ATP13A5Q4VNC0 1218 aa16.04■□□□□ 0.16
PCDHGA11-202ENST00000518882 UBE2UQ5VVX9 321 aa16.04■□□□□ 0.16
PCDHGA11-202ENST00000518882 SYT12Q8IV01 421 aa16.04■□□□□ 0.16
PCDHGA11-202ENST00000518882 MCFD2Q8NI22 146 aa16.04■□□□□ 0.16
PCDHGA11-202ENST00000518882 C7orf34Q96L11 122 aa16.04■□□□□ 0.16
PCDHGA11-202ENST00000518882 SLC12A9Q9BXP2 914 aa16.04■□□□□ 0.16
PCDHGA11-202ENST00000518882 RNF6Q9Y252 685 aa16.04■□□□□ 0.16
PCDHGA11-202ENST00000518882 BTBD3Q9Y2F9 522 aa16.04■□□□□ 0.16
PCDHGA11-202ENST00000518882 HTR3EA5X5Y0 456 aa16.03■□□□□ 0.16
PCDHGA11-202ENST00000518882 ZNF821O75541 412 aaPredicted RBP16.03■□□□□ 0.16
PCDHGA11-202ENST00000518882 COL6A1P12109 1028 aa16.03■□□□□ 0.16
PCDHGA11-202ENST00000518882 ALDH7A1P49419 539 aaKnown RBP16.03■□□□□ 0.16
PCDHGA11-202ENST00000518882 HNRNPFP52597 415 aaKnown RBP16.03■□□□□ 0.16
PCDHGA11-202ENST00000518882 PPP5CP53041 499 aa16.03■□□□□ 0.16
PCDHGA11-202ENST00000518882 ELAVL2Q12926 359 aaKnown RBP16.03■□□□□ 0.16
PCDHGA11-202ENST00000518882 FRG2Q64ET8 278 aa16.03■□□□□ 0.16
PCDHGA11-202ENST00000518882 GPR153Q6NV75 609 aa16.03■□□□□ 0.16
PCDHGA11-202ENST00000518882 CRTC1Q6UUV9 634 aa16.03■□□□□ 0.16
PCDHGA11-202ENST00000518882 MSANTD1Q6ZTZ1 278 aa16.03■□□□□ 0.16
PCDHGA11-202ENST00000518882 FAM9CQ8IZT9 166 aa16.03■□□□□ 0.16
PCDHGA11-202ENST00000518882 DBF4BQ8NFT6 615 aa16.03■□□□□ 0.16
PCDHGA11-202ENST00000518882 ADAMTS19Q8TE59 1207 aa16.03■□□□□ 0.16
PCDHGA11-202ENST00000518882 PROX1Q92786 737 aa16.03■□□□□ 0.16
PCDHGA11-202ENST00000518882 VOPP1Q96AW1 172 aa16.03■□□□□ 0.16
PCDHGA11-202ENST00000518882 KCNC2Q96PR1 638 aa16.03■□□□□ 0.16
PCDHGA11-202ENST00000518882 FRG2BQ96QU4 278 aa16.03■□□□□ 0.16
PCDHGA11-202ENST00000518882 P2RY13Q9BPV8 354 aa16.03■□□□□ 0.16
PCDHGA11-202ENST00000518882 ITPAQ9BY32 194 aa16.03■□□□□ 0.16
PCDHGA11-202ENST00000518882 DCSTAMPQ9H295 470 aa16.03■□□□□ 0.16
PCDHGA11-202ENST00000518882 NMRK2Q9NPI5 230 aa16.03■□□□□ 0.16
PCDHGA11-202ENST00000518882 TMEM184CQ9NVA4 438 aa16.03■□□□□ 0.16
PCDHGA11-202ENST00000518882 CLEC4EQ9ULY5 219 aa16.03■□□□□ 0.16
PCDHGA11-202ENST00000518882 LAMA3Q16787 3333 aa16.03■□□□□ 0.16
PCDHGA11-202ENST00000518882 NPIPB8E9PQR5 432 aa16.03■□□□□ 0.16
PCDHGA11-202ENST00000518882 M0R082 166 aa16.03■□□□□ 0.16
PCDHGA11-202ENST00000518882 GREM1O60565 184 aa16.03■□□□□ 0.16
PCDHGA11-202ENST00000518882 CD22P20273 847 aa16.03■□□□□ 0.16
PCDHGA11-202ENST00000518882 PRPS1L1P21108 318 aa16.03■□□□□ 0.16
PCDHGA11-202ENST00000518882 HOXD12P35452 270 aa16.03■□□□□ 0.16
PCDHGA11-202ENST00000518882 PPP3CCP48454 512 aa16.03■□□□□ 0.16
PCDHGA11-202ENST00000518882 CDKL4Q5MAI5 379 aa16.03■□□□□ 0.16
PCDHGA11-202ENST00000518882 CDC26Q8NHZ8 85 aa16.03■□□□□ 0.16
PCDHGA11-202ENST00000518882 IPCEF1Q8WWN9 437 aaPredicted RBP16.03■□□□□ 0.16
PCDHGA11-202ENST00000518882 ASB11Q8WXH4 323 aa16.03■□□□□ 0.16
PCDHGA11-202ENST00000518882 DACH2Q96NX9 599 aa16.03■□□□□ 0.16
PCDHGA11-202ENST00000518882 ATG10Q9H0Y0 220 aa16.03■□□□□ 0.16
PCDHGA11-202ENST00000518882 AMBNQ9NP70 447 aa16.03■□□□□ 0.16
PCDHGA11-202ENST00000518882 ZDHHC3Q9NYG2 299 aa16.03■□□□□ 0.16
PCDHGA11-202ENST00000518882 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.02■□□□□ 0.16
PCDHGA11-202ENST00000518882 TMEM229AB2RXF0 380 aa16.02■□□□□ 0.16
PCDHGA11-202ENST00000518882 MRPS14O60783 128 aaKnown RBP16.02■□□□□ 0.16
PCDHGA11-202ENST00000518882 C9P02748 559 aa16.02■□□□□ 0.16
PCDHGA11-202ENST00000518882 COX7A2P14406 83 aa16.02■□□□□ 0.16
PCDHGA11-202ENST00000518882 AQP1P29972 269 aa16.02■□□□□ 0.16
PCDHGA11-202ENST00000518882 KCNJ10P78508 379 aa16.02■□□□□ 0.16
PCDHGA11-202ENST00000518882 GPNMBQ14956 572 aa16.02■□□□□ 0.16
PCDHGA11-202ENST00000518882 TCTN1Q2MV58 587 aa16.02■□□□□ 0.16
PCDHGA11-202ENST00000518882 DGKKQ5KSL6 1271 aa16.02■□□□□ 0.16
PCDHGA11-202ENST00000518882 LRRC66Q68CR7 880 aa16.02■□□□□ 0.16
PCDHGA11-202ENST00000518882 ERICH5Q6P6B1 374 aa16.02■□□□□ 0.16
PCDHGA11-202ENST00000518882 TSEN54Q7Z6J9 526 aaKnown RBP16.02■□□□□ 0.16
PCDHGA11-202ENST00000518882 FAM124AQ86V42 546 aa16.02■□□□□ 0.16
PCDHGA11-202ENST00000518882 CBARPQ8N350 705 aaPredicted RBP16.02■□□□□ 0.16
PCDHGA11-202ENST00000518882 SYNPOQ8N3V7 929 aa16.02■□□□□ 0.16
PCDHGA11-202ENST00000518882 HJURPQ8NCD3 748 aaPredicted RBP16.02■□□□□ 0.16
PCDHGA11-202ENST00000518882 CSGALNACT1Q8TDX6 532 aa16.02■□□□□ 0.16
PCDHGA11-202ENST00000518882 SLC38A4Q969I6 547 aa16.02■□□□□ 0.16
PCDHGA11-202ENST00000518882 MAL2Q969L2 176 aa16.02■□□□□ 0.16
PCDHGA11-202ENST00000518882 HRASLS5Q96KN8 279 aa16.02■□□□□ 0.16
PCDHGA11-202ENST00000518882 FCRL1Q96LA6 429 aa16.02■□□□□ 0.16
PCDHGA11-202ENST00000518882 COPS8Q99627 209 aa16.02■□□□□ 0.16
PCDHGA11-202ENST00000518882 COPS4Q9BT78 406 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms