RNA–Protein interactions for RNA: ENST00000518040.5

SH2D4A-202, Transcript of SH2 domain containing 4A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SH2D4A, Length 1,697 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-202ENST00000518040 LMBRD1Q9NUN5 540 aa9.29□□□□□ -0.92
SH2D4A-202ENST00000518040 UVRAGQ9P2Y5 699 aa9.29□□□□□ -0.92
SH2D4A-202ENST00000518040 SLC39A10Q9ULF5 831 aa9.29□□□□□ -0.92
SH2D4A-202ENST00000518040 MRFAP1Q9Y605 127 aa9.29□□□□□ -0.92
SH2D4A-202ENST00000518040 FN1P02751 2386 aaKnown RBP9.29□□□□□ -0.92
SH2D4A-202ENST00000518040 AKAP6Q13023 2319 aa9.29□□□□□ -0.92
SH2D4A-202ENST00000518040 COL6A5A8TX70 2615 aa9.29□□□□□ -0.92
SH2D4A-202ENST00000518040 A0A0J9YVX5 310 aa9.29□□□□□ -0.92
SH2D4A-202ENST00000518040 FAM187AA6NFU0 413 aa9.29□□□□□ -0.92
SH2D4A-202ENST00000518040 H7C0S8 307 aa9.29□□□□□ -0.92
SH2D4A-202ENST00000518040 TXNDC9O14530 226 aa9.29□□□□□ -0.92
SH2D4A-202ENST00000518040 VPS26AO75436 327 aa9.29□□□□□ -0.92
SH2D4A-202ENST00000518040 SLC25A12O75746 678 aa9.29□□□□□ -0.92
SH2D4A-202ENST00000518040 NEURL1O76050 574 aa9.29□□□□□ -0.92
SH2D4A-202ENST00000518040 SEC24DO94855 1032 aaPredicted RBP9.29□□□□□ -0.92
SH2D4A-202ENST00000518040 OR56A5P0C7T3 313 aa9.29□□□□□ -0.92
SH2D4A-202ENST00000518040 PTGER1P34995 402 aa9.29□□□□□ -0.92
SH2D4A-202ENST00000518040 KIR2DL3P43628 341 aa9.29□□□□□ -0.92
SH2D4A-202ENST00000518040 AGTR2P50052 363 aa9.29□□□□□ -0.92
SH2D4A-202ENST00000518040 PPP2R2BQ00005 443 aa9.29□□□□□ -0.92
SH2D4A-202ENST00000518040 PMPCAQ10713 525 aa9.29□□□□□ -0.92
SH2D4A-202ENST00000518040 ITIH4Q14624 930 aa9.29□□□□□ -0.92
SH2D4A-202ENST00000518040 PRTGQ2VWP7 1150 aa9.29□□□□□ -0.92
SH2D4A-202ENST00000518040 TTC23LQ6PF05 361 aa9.29□□□□□ -0.92
SH2D4A-202ENST00000518040 NPNTQ6UXI9 565 aa9.29□□□□□ -0.92
SH2D4A-202ENST00000518040 UNC5DQ6UXZ4 953 aa9.29□□□□□ -0.92
SH2D4A-202ENST00000518040 TAS2R42Q7RTR8 314 aa9.29□□□□□ -0.92
SH2D4A-202ENST00000518040 RFX6Q8HWS3 928 aa9.29□□□□□ -0.92
SH2D4A-202ENST00000518040 CCDC71Q8IV32 467 aaPredicted RBP9.29□□□□□ -0.92
SH2D4A-202ENST00000518040 OR13C4Q8NGS5 318 aa9.29□□□□□ -0.92
SH2D4A-202ENST00000518040 TMEM125Q96AQ2 219 aa9.29□□□□□ -0.92
SH2D4A-202ENST00000518040 MMABQ96EY8 250 aaPredicted RBP9.29□□□□□ -0.92
SH2D4A-202ENST00000518040 ZFYVE21Q9BQ24 234 aa9.29□□□□□ -0.92
SH2D4A-202ENST00000518040 MENTQ9BUN1 341 aa9.29□□□□□ -0.92
SH2D4A-202ENST00000518040 ZNF395Q9H8N7 513 aaPredicted RBP9.29□□□□□ -0.92
SH2D4A-202ENST00000518040 MMP25Q9NPA2 562 aa9.29□□□□□ -0.92
SH2D4A-202ENST00000518040 ANKRD10Q9NXR5 420 aa9.29□□□□□ -0.92
SH2D4A-202ENST00000518040 RSPH14Q9UHP6 348 aa9.29□□□□□ -0.92
SH2D4A-202ENST00000518040 FEZ2Q9UHY8 353 aaPredicted RBP9.29□□□□□ -0.92
SH2D4A-202ENST00000518040 VPS13CQ709C8 3753 aa9.29□□□□□ -0.92
SH2D4A-202ENST00000518040 FAM47E-STBD1D6RA91 191 aa9.28□□□□□ -0.92
SH2D4A-202ENST00000518040 KLRC4-KLRK1H3BQV0 150 aa9.28□□□□□ -0.92
SH2D4A-202ENST00000518040 ZNHIT1O43257 154 aa9.28□□□□□ -0.92
SH2D4A-202ENST00000518040 MBD3O95983 291 aa9.28□□□□□ -0.92
SH2D4A-202ENST00000518040 AGTP01019 485 aa9.28□□□□□ -0.92
SH2D4A-202ENST00000518040 SKILP12757 684 aa9.28□□□□□ -0.92
SH2D4A-202ENST00000518040 TFEBP19484 476 aa9.28□□□□□ -0.92
SH2D4A-202ENST00000518040 ZFP36L2P47974 494 aaKnown RBP9.28□□□□□ -0.92
SH2D4A-202ENST00000518040 ZNF140P52738 457 aaPredicted RBP9.28□□□□□ -0.92
SH2D4A-202ENST00000518040 MYL5Q02045 173 aa9.28□□□□□ -0.92
SH2D4A-202ENST00000518040 TFDP2Q14188 446 aa9.28□□□□□ -0.92
SH2D4A-202ENST00000518040 BRD3Q15059 726 aa9.28□□□□□ -0.92
SH2D4A-202ENST00000518040 SLC25A35Q3KQZ1 300 aa9.28□□□□□ -0.92
SH2D4A-202ENST00000518040 FCRLBQ6BAA4 426 aa9.28□□□□□ -0.92
SH2D4A-202ENST00000518040 RANBP10Q6VN20 620 aa9.28□□□□□ -0.92
SH2D4A-202ENST00000518040 PACS1Q6VY07 963 aa9.28□□□□□ -0.92
SH2D4A-202ENST00000518040 ZNF567Q8N184 647 aa9.28□□□□□ -0.92
SH2D4A-202ENST00000518040 AMER3Q8N944 861 aa9.28□□□□□ -0.92
SH2D4A-202ENST00000518040 SIMC1Q8NDZ2 872 aa9.28□□□□□ -0.92
SH2D4A-202ENST00000518040 LRRC45Q96CN5 670 aa9.28□□□□□ -0.92
SH2D4A-202ENST00000518040 LRRC46Q96FV0 321 aa9.28□□□□□ -0.92
SH2D4A-202ENST00000518040 CYTH2Q99418 400 aa9.28□□□□□ -0.92
SH2D4A-202ENST00000518040 SMARCAL1Q9NZC9 954 aa9.28□□□□□ -0.92
SH2D4A-202ENST00000518040 CTTNBP2NLQ9P2B4 639 aa9.28□□□□□ -0.92
SH2D4A-202ENST00000518040 KLF13Q9Y2Y9 288 aaPredicted RBP9.28□□□□□ -0.92
SH2D4A-202ENST00000518040 AAR2Q9Y312 384 aaKnown RBP9.28□□□□□ -0.92
SH2D4A-202ENST00000518040 SCN2AQ99250 2005 aa9.27□□□□□ -0.92
SH2D4A-202ENST00000518040 LOC105369274A0A096LPK9 316 aa9.27□□□□□ -0.93
SH2D4A-202ENST00000518040 LOC102723532A0A0G2JNH3 316 aa9.27□□□□□ -0.93
SH2D4A-202ENST00000518040 C3orf70A6NLC5 250 aaPredicted RBP9.27□□□□□ -0.93
SH2D4A-202ENST00000518040 A6NNC1 897 aa9.27□□□□□ -0.93
SH2D4A-202ENST00000518040 ARHGEF9O43307 516 aa9.27□□□□□ -0.93
SH2D4A-202ENST00000518040 ATE1O95260 518 aa9.27□□□□□ -0.93
SH2D4A-202ENST00000518040 LY6G6DO95868 133 aa9.27□□□□□ -0.93
SH2D4A-202ENST00000518040 CYB561P49447 251 aa9.27□□□□□ -0.93
SH2D4A-202ENST00000518040 NUP107P57740 925 aa9.27□□□□□ -0.93
SH2D4A-202ENST00000518040 FAM53BQ14153 422 aa9.27□□□□□ -0.93
SH2D4A-202ENST00000518040 MSS51Q4VC12 460 aa9.27□□□□□ -0.93
SH2D4A-202ENST00000518040 FIGNQ5HY92 759 aa9.27□□□□□ -0.93
SH2D4A-202ENST00000518040 RNFT1Q5M7Z0 435 aa9.27□□□□□ -0.93
SH2D4A-202ENST00000518040 E4F1Q66K89 784 aaPredicted RBP9.27□□□□□ -0.93
SH2D4A-202ENST00000518040 ITPRIPL1Q6GPH6 555 aa9.27□□□□□ -0.93
SH2D4A-202ENST00000518040 APTXQ7Z2E3 356 aaKnown RBP9.27□□□□□ -0.93
SH2D4A-202ENST00000518040 TAX1BP1Q86VP1 789 aa9.27□□□□□ -0.93
SH2D4A-202ENST00000518040 ZC3H7AQ8IWR0 971 aaKnown RBP9.27□□□□□ -0.93
SH2D4A-202ENST00000518040 SLC22A15Q8IZD6 547 aa9.27□□□□□ -0.93
SH2D4A-202ENST00000518040 OR4N4Q8N0Y3 316 aa9.27□□□□□ -0.93
SH2D4A-202ENST00000518040 C2orf73Q8N5S3 287 aaPredicted RBP9.27□□□□□ -0.93
SH2D4A-202ENST00000518040 OR5M3Q8NGP4 307 aa9.27□□□□□ -0.93
SH2D4A-202ENST00000518040 OR10Q1Q8NGQ4 319 aa9.27□□□□□ -0.93
SH2D4A-202ENST00000518040 HMGCLL1Q8TB92 370 aa9.27□□□□□ -0.93
SH2D4A-202ENST00000518040 FAM222BQ8WU58 562 aa9.27□□□□□ -0.93
SH2D4A-202ENST00000518040 PPP1R2P1Q96PQ5 205 aa9.27□□□□□ -0.93
SH2D4A-202ENST00000518040 FERMT1Q9BQL6 677 aa9.27□□□□□ -0.93
SH2D4A-202ENST00000518040 TSSK1BQ9BXA7 367 aa9.27□□□□□ -0.93
SH2D4A-202ENST00000518040 DRC3Q9H069 523 aa9.27□□□□□ -0.93
SH2D4A-202ENST00000518040 TRIM45Q9H8W5 580 aaPredicted RBP9.27□□□□□ -0.93
SH2D4A-202ENST00000518040 BEX4Q9NWD9 120 aaPredicted RBP9.27□□□□□ -0.93
SH2D4A-202ENST00000518040 UTP6Q9NYH9 597 aaKnown RBP9.27□□□□□ -0.93
SH2D4A-202ENST00000518040 PHF3Q92576 2039 aaKnown RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms