RNA–Protein interactions for RNA: ENST00000517275.3

RNU6-840P-201, Transcript of RNA, U6 small nuclear 840, pseudogene, humanhuman

BASIC

Gene RNU6-840P, Length 65 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-840P-201ENST00000517275 B3GLCTQ6Y288 498 aa3.06□□□□□ -1.92
RNU6-840P-201ENST00000517275 TUBA1AQ71U36 451 aa3.06□□□□□ -1.92
RNU6-840P-201ENST00000517275 MARK2Q7KZI7 788 aaKnown RBP3.06□□□□□ -1.92
RNU6-840P-201ENST00000517275 DHX29Q7Z478 1369 aaKnown RBP3.06□□□□□ -1.92
RNU6-840P-201ENST00000517275 KRTAP1-3Q8IUG1 177 aa3.06□□□□□ -1.92
RNU6-840P-201ENST00000517275 TMEM139Q8IV31 216 aa3.06□□□□□ -1.92
RNU6-840P-201ENST00000517275 SERPINA12Q8IW75 414 aa3.06□□□□□ -1.92
RNU6-840P-201ENST00000517275 NAGSQ8N159 534 aa3.06□□□□□ -1.92
RNU6-840P-201ENST00000517275 PRSS35Q8N3Z0 413 aa3.06□□□□□ -1.92
RNU6-840P-201ENST00000517275 TMEM99Q8N816 258 aa3.06□□□□□ -1.92
RNU6-840P-201ENST00000517275 OR1J1Q8NGS3 322 aa3.06□□□□□ -1.92
RNU6-840P-201ENST00000517275 ST7LQ8TDW4 575 aa3.06□□□□□ -1.92
RNU6-840P-201ENST00000517275 SAP25Q8TEE9 199 aa3.06□□□□□ -1.92
RNU6-840P-201ENST00000517275 TSACCQ96A04 125 aaPredicted RBP3.06□□□□□ -1.92
RNU6-840P-201ENST00000517275 RTP4Q96DX8 246 aa3.06□□□□□ -1.92
RNU6-840P-201ENST00000517275 C14orf79Q96F83 325 aa3.06□□□□□ -1.92
RNU6-840P-201ENST00000517275 THOC1Q96FV9 657 aaKnown RBP3.06□□□□□ -1.92
RNU6-840P-201ENST00000517275 PRAM1Q96QH2 718 aa3.06□□□□□ -1.92
RNU6-840P-201ENST00000517275 PKP2Q99959 881 aa3.06□□□□□ -1.92
RNU6-840P-201ENST00000517275 TUBA1CQ9BQE3 449 aa3.06□□□□□ -1.92
RNU6-840P-201ENST00000517275 NTPCRQ9BSD7 190 aaKnown RBP3.06□□□□□ -1.92
RNU6-840P-201ENST00000517275 ACPTQ9BZG2 426 aa3.06□□□□□ -1.92
RNU6-840P-201ENST00000517275 NAPBQ9H115 298 aa3.06□□□□□ -1.92
RNU6-840P-201ENST00000517275 CPVLQ9H3G5 476 aa3.06□□□□□ -1.92
RNU6-840P-201ENST00000517275 DDX31Q9H8H2 851 aaKnown RBP3.06□□□□□ -1.92
RNU6-840P-201ENST00000517275 CHST11Q9NPF2 352 aa3.06□□□□□ -1.92
RNU6-840P-201ENST00000517275 SDR39U1Q9NRG7 319 aaPredicted RBP3.06□□□□□ -1.92
RNU6-840P-201ENST00000517275 PHPT1Q9NRX4 125 aaPredicted RBP3.06□□□□□ -1.92
RNU6-840P-201ENST00000517275 NINJ2Q9NZG7 142 aa3.06□□□□□ -1.92
RNU6-840P-201ENST00000517275 HOOK1Q9UJC3 728 aaKnown RBP3.06□□□□□ -1.92
RNU6-840P-201ENST00000517275 KCNK6Q9Y257 313 aa3.06□□□□□ -1.92
RNU6-840P-201ENST00000517275 ITM2BQ9Y287 266 aa3.06□□□□□ -1.92
RNU6-840P-201ENST00000517275 TTC3P53804 2025 aa3.05□□□□□ -1.92
RNU6-840P-201ENST00000517275 TRAV18A0A075B6X5 111 aa3.05□□□□□ -1.92
RNU6-840P-201ENST00000517275 IGLV5-45A0A087WSX0 123 aa3.05□□□□□ -1.92
RNU6-840P-201ENST00000517275 LOC101059948A0A1B0GTJ6 334 aa3.05□□□□□ -1.92
RNU6-840P-201ENST00000517275 TMEM129A0AVI4 362 aa3.05□□□□□ -1.92
RNU6-840P-201ENST00000517275 KRT87PA6NCN2 255 aa3.05□□□□□ -1.92
RNU6-840P-201ENST00000517275 SERINC4A6NH21 518 aa3.05□□□□□ -1.92
RNU6-840P-201ENST00000517275 TXNL1O43396 289 aa3.05□□□□□ -1.92
RNU6-840P-201ENST00000517275 TRIM16O95361 564 aa3.05□□□□□ -1.92
RNU6-840P-201ENST00000517275 LIFP15018 202 aa3.05□□□□□ -1.92
RNU6-840P-201ENST00000517275 CCNA2P20248 432 aa3.05□□□□□ -1.92
RNU6-840P-201ENST00000517275 JAK1P23458 1154 aa3.05□□□□□ -1.92
RNU6-840P-201ENST00000517275 ACP1P24666 158 aa3.05□□□□□ -1.92
RNU6-840P-201ENST00000517275 HOXA11P31270 313 aaPredicted RBP3.05□□□□□ -1.92
RNU6-840P-201ENST00000517275 NKX2-1P43699 371 aaPredicted RBP3.05□□□□□ -1.92
RNU6-840P-201ENST00000517275 GAS1P54826 345 aa3.05□□□□□ -1.92
RNU6-840P-201ENST00000517275 EVCP57679 992 aa3.05□□□□□ -1.92
RNU6-840P-201ENST00000517275 SLC34A1Q06495 639 aa3.05□□□□□ -1.92
RNU6-840P-201ENST00000517275 LTBQ06643 244 aa3.05□□□□□ -1.92
RNU6-840P-201ENST00000517275 DMPKQ09013 629 aa3.05□□□□□ -1.92
RNU6-840P-201ENST00000517275 TRAP1Q12931 704 aaKnown RBP3.05□□□□□ -1.92
RNU6-840P-201ENST00000517275 SRSF9Q13242 221 aaKnown RBP eCLIP3.05□□□□□ -1.92
RNU6-840P-201ENST00000517275 TRADDQ15628 312 aa3.05□□□□□ -1.92
RNU6-840P-201ENST00000517275 ACKR1Q16570 336 aa3.05□□□□□ -1.92
RNU6-840P-201ENST00000517275 UGP2Q16851 508 aa3.05□□□□□ -1.92
RNU6-840P-201ENST00000517275 XKR6Q5GH73 641 aa3.05□□□□□ -1.92
RNU6-840P-201ENST00000517275 SLC35D3Q5M8T2 416 aa3.05□□□□□ -1.92
RNU6-840P-201ENST00000517275 FUT10Q6P4F1 479 aa3.05□□□□□ -1.92
RNU6-840P-201ENST00000517275 ZNF549Q6P9A3 640 aa3.05□□□□□ -1.92
RNU6-840P-201ENST00000517275 CORO6Q6QEF8 472 aa3.05□□□□□ -1.92
RNU6-840P-201ENST00000517275 SLC16A9Q7RTY1 509 aa3.05□□□□□ -1.92
RNU6-840P-201ENST00000517275 ARMC9Q7Z3E5 817 aa3.05□□□□□ -1.92
RNU6-840P-201ENST00000517275 PRUNE1Q86TP1 453 aa3.05□□□□□ -1.92
RNU6-840P-201ENST00000517275 RBM23Q86U06 439 aaKnown RBP3.05□□□□□ -1.92
RNU6-840P-201ENST00000517275 LAX1Q8IWV1 398 aa3.05□□□□□ -1.92
RNU6-840P-201ENST00000517275 ELMOD2Q8IZ81 293 aa3.05□□□□□ -1.92
RNU6-840P-201ENST00000517275 ARL6IP6Q8N6S5 226 aa3.05□□□□□ -1.92
RNU6-840P-201ENST00000517275 MAPKAPK5-AS1Q8N8E1 139 aa3.05□□□□□ -1.92
RNU6-840P-201ENST00000517275 EXOC6Q8TAG9 804 aa3.05□□□□□ -1.92
RNU6-840P-201ENST00000517275 OLIG1Q8TAK6 271 aa3.05□□□□□ -1.92
RNU6-840P-201ENST00000517275 SORCS1Q8WY21 1168 aa3.05□□□□□ -1.92
RNU6-840P-201ENST00000517275 TAF4BQ92750 862 aa3.05□□□□□ -1.92
RNU6-840P-201ENST00000517275 MRPL38Q96DV4 380 aaKnown RBP3.05□□□□□ -1.92
RNU6-840P-201ENST00000517275 ALG14Q96F25 216 aa3.05□□□□□ -1.92
RNU6-840P-201ENST00000517275 DTD2Q96FN9 168 aa3.05□□□□□ -1.92
RNU6-840P-201ENST00000517275 ZNF778Q96MU6 729 aa3.05□□□□□ -1.92
RNU6-840P-201ENST00000517275 TSGA13Q96PP4 275 aa3.05□□□□□ -1.92
RNU6-840P-201ENST00000517275 NDNQ99608 321 aa3.05□□□□□ -1.92
RNU6-840P-201ENST00000517275 PRMT1Q99873 361 aaKnown RBP3.05□□□□□ -1.92
RNU6-840P-201ENST00000517275 ZNF559Q9BR84 538 aa3.05□□□□□ -1.92
RNU6-840P-201ENST00000517275 FAM213AQ9BRX8 229 aa3.05□□□□□ -1.92
RNU6-840P-201ENST00000517275 TMEM204Q9BSN7 226 aa3.05□□□□□ -1.92
RNU6-840P-201ENST00000517275 FSD1Q9BTV5 496 aa3.05□□□□□ -1.92
RNU6-840P-201ENST00000517275 CARD9Q9H257 536 aa3.05□□□□□ -1.92
RNU6-840P-201ENST00000517275 TMPRSS5Q9H3S3 457 aa3.05□□□□□ -1.92
RNU6-840P-201ENST00000517275 C10orf88Q9H8K7 445 aa3.05□□□□□ -1.92
RNU6-840P-201ENST00000517275 SYTL2Q9HCH5 934 aa3.05□□□□□ -1.92
RNU6-840P-201ENST00000517275 RAVER2Q9HCJ3 691 aaKnown RBP3.05□□□□□ -1.92
RNU6-840P-201ENST00000517275 FAM207AQ9NSI2 230 aaPredicted RBP3.05□□□□□ -1.92
RNU6-840P-201ENST00000517275 PDRG1Q9NUG6 133 aa3.05□□□□□ -1.92
RNU6-840P-201ENST00000517275 FAM118AQ9NWS6 357 aa3.05□□□□□ -1.92
RNU6-840P-201ENST00000517275 TAS2R3Q9NYW6 316 aa3.05□□□□□ -1.92
RNU6-840P-201ENST00000517275 FLRT3Q9NZU0 649 aa3.05□□□□□ -1.92
RNU6-840P-201ENST00000517275 ACTR3BQ9P1U1 418 aa3.05□□□□□ -1.92
RNU6-840P-201ENST00000517275 FETUBQ9UGM5 382 aa3.05□□□□□ -1.92
RNU6-840P-201ENST00000517275 UBQLN2Q9UHD9 624 aa3.05□□□□□ -1.92
RNU6-840P-201ENST00000517275 GMEB2Q9UKD1 530 aa3.05□□□□□ -1.92
RNU6-840P-201ENST00000517275 POU2F3Q9UKI9 436 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms