RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 ENO3P13929 434 aaPredicted RBP5.62□□□□□ -1.51
SCARNA6.1-201ENST00000516989 HIST1H2ADP20671 130 aa5.62□□□□□ -1.51
SCARNA6.1-201ENST00000516989 FDXRP22570 491 aa5.62□□□□□ -1.51
SCARNA6.1-201ENST00000516989 CD1CP29017 333 aa5.62□□□□□ -1.51
SCARNA6.1-201ENST00000516989 TIAL1Q01085 375 aaKnown RBP eCLIP5.62□□□□□ -1.51
SCARNA6.1-201ENST00000516989 INSM1Q01101 510 aaPredicted RBP5.62□□□□□ -1.51
SCARNA6.1-201ENST00000516989 ILF2Q12905 390 aaKnown RBP5.62□□□□□ -1.51
SCARNA6.1-201ENST00000516989 PRKAA1Q13131 559 aa5.62□□□□□ -1.51
SCARNA6.1-201ENST00000516989 NAB1Q13506 487 aa5.62□□□□□ -1.51
SCARNA6.1-201ENST00000516989 PCBP2Q15366 365 aaKnown RBP eCLIP5.62□□□□□ -1.51
SCARNA6.1-201ENST00000516989 LGSNQ5TDP6 509 aa5.62□□□□□ -1.51
SCARNA6.1-201ENST00000516989 MROH9Q5TGP6 573 aa5.62□□□□□ -1.51
SCARNA6.1-201ENST00000516989 HES3Q5TGS1 186 aa5.62□□□□□ -1.51
SCARNA6.1-201ENST00000516989 BROXQ5VW32 411 aa5.62□□□□□ -1.51
SCARNA6.1-201ENST00000516989 NXNQ6DKJ4 435 aa5.62□□□□□ -1.51
SCARNA6.1-201ENST00000516989 IRGCQ6NXR0 463 aa5.62□□□□□ -1.51
SCARNA6.1-201ENST00000516989 WDR93Q6P2C0 686 aa5.62□□□□□ -1.51
SCARNA6.1-201ENST00000516989 TMEM71Q6P5X7 295 aa5.62□□□□□ -1.51
SCARNA6.1-201ENST00000516989 PGM2L1Q6PCE3 622 aa5.62□□□□□ -1.51
SCARNA6.1-201ENST00000516989 KLHL35Q6PF15 583 aa5.62□□□□□ -1.51
SCARNA6.1-201ENST00000516989 CYP2R1Q6VVX0 501 aa5.62□□□□□ -1.51
SCARNA6.1-201ENST00000516989 CYHR1Q6ZMK1 362 aa5.62□□□□□ -1.51
SCARNA6.1-201ENST00000516989 RBM44Q6ZP01 1051 aaKnown RBP5.62□□□□□ -1.51
SCARNA6.1-201ENST00000516989 SPRED1Q7Z699 444 aa5.62□□□□□ -1.51
SCARNA6.1-201ENST00000516989 PIM3Q86V86 326 aa5.62□□□□□ -1.51
SCARNA6.1-201ENST00000516989 TMPRSS12Q86WS5 348 aa5.62□□□□□ -1.51
SCARNA6.1-201ENST00000516989 MARCH9Q86YJ5 346 aa5.62□□□□□ -1.51
SCARNA6.1-201ENST00000516989 TBC1D21Q8IYX1 336 aa5.62□□□□□ -1.51
SCARNA6.1-201ENST00000516989 C2orf73Q8N5S3 287 aaPredicted RBP5.62□□□□□ -1.51
SCARNA6.1-201ENST00000516989 OR52E1Q8NGJ3 308 aa5.62□□□□□ -1.51
SCARNA6.1-201ENST00000516989 OR5AR1Q8NGP9 310 aa5.62□□□□□ -1.51
SCARNA6.1-201ENST00000516989 WDR48Q8TAF3 677 aa5.62□□□□□ -1.51
SCARNA6.1-201ENST00000516989 CD200R1Q8TD46 325 aa5.62□□□□□ -1.51
SCARNA6.1-201ENST00000516989 MAGEC3Q8TD91 643 aa5.62□□□□□ -1.51
SCARNA6.1-201ENST00000516989 EEF1AKMT1Q8WVE0 214 aa5.62□□□□□ -1.51
SCARNA6.1-201ENST00000516989 TP53INP1Q96A56 240 aa5.62□□□□□ -1.51
SCARNA6.1-201ENST00000516989 RAD51AP1Q96B01 352 aa5.62□□□□□ -1.51
SCARNA6.1-201ENST00000516989 LINGO1Q96FE5 620 aa5.62□□□□□ -1.51
SCARNA6.1-201ENST00000516989 TSPAN17Q96FV3 270 aa5.62□□□□□ -1.51
SCARNA6.1-201ENST00000516989 SCYL1Q96KG9 808 aa5.62□□□□□ -1.51
SCARNA6.1-201ENST00000516989 HIST1H2AHQ96KK5 128 aa5.62□□□□□ -1.51
SCARNA6.1-201ENST00000516989 RBBP8Q99708 897 aa5.62□□□□□ -1.51
SCARNA6.1-201ENST00000516989 OLFM1Q99784 485 aa5.62□□□□□ -1.51
SCARNA6.1-201ENST00000516989 HIST1H2AJQ99878 128 aa5.62□□□□□ -1.51
SCARNA6.1-201ENST00000516989 H2AFJQ9BTM1 129 aa5.62□□□□□ -1.51
SCARNA6.1-201ENST00000516989 HGH1Q9BTY7 390 aa5.62□□□□□ -1.51
SCARNA6.1-201ENST00000516989 FUT8Q9BYC5 575 aa5.62□□□□□ -1.51
SCARNA6.1-201ENST00000516989 TXLNGYQ9BZA5 131 aa5.62□□□□□ -1.51
SCARNA6.1-201ENST00000516989 SRMSQ9H3Y6 488 aa5.62□□□□□ -1.51
SCARNA6.1-201ENST00000516989 XKR8Q9H6D3 395 aa5.62□□□□□ -1.51
SCARNA6.1-201ENST00000516989 UCK1Q9HA47 277 aa5.62□□□□□ -1.51
SCARNA6.1-201ENST00000516989 SEMA3GQ9NS98 782 aa5.62□□□□□ -1.51
SCARNA6.1-201ENST00000516989 HRASLS2Q9NWW9 162 aa5.62□□□□□ -1.51
SCARNA6.1-201ENST00000516989 CIDEBQ9UHD4 219 aa5.62□□□□□ -1.51
SCARNA6.1-201ENST00000516989 LNPEPQ9UIQ6 1025 aa5.62□□□□□ -1.51
SCARNA6.1-201ENST00000516989 CORO1CQ9ULV4 474 aaPredicted RBP5.62□□□□□ -1.51
SCARNA6.1-201ENST00000516989 PLAGL1Q9UM63 463 aa5.62□□□□□ -1.51
SCARNA6.1-201ENST00000516989 CLCA2Q9UQC9 943 aa5.62□□□□□ -1.51
SCARNA6.1-201ENST00000516989 RUVBL2Q9Y230 463 aaKnown RBP5.62□□□□□ -1.51
SCARNA6.1-201ENST00000516989 NFS1Q9Y697 457 aa5.62□□□□□ -1.51
SCARNA6.1-201ENST00000516989 ANKRD11Q6UB99 2663 aaPredicted RBP5.62□□□□□ -1.51
SCARNA6.1-201ENST00000516989 PLXNB3Q9ULL4 1909 aa5.62□□□□□ -1.51
SCARNA6.1-201ENST00000516989 PIKFYVEQ9Y2I7 2098 aa5.62□□□□□ -1.51
SCARNA6.1-201ENST00000516989 GSAPA4D1B5 854 aa5.61□□□□□ -1.51
SCARNA6.1-201ENST00000516989 PABPN1LA6NDY0 278 aaKnown RBP5.61□□□□□ -1.51
SCARNA6.1-201ENST00000516989 LILRA5A6NI73 299 aa5.61□□□□□ -1.51
SCARNA6.1-201ENST00000516989 A8MU76 341 aa5.61□□□□□ -1.51
SCARNA6.1-201ENST00000516989 TMX2-CTNND1H3BSU7 103 aa5.61□□□□□ -1.51
SCARNA6.1-201ENST00000516989 EIF3FO00303 357 aaPredicted RBP5.61□□□□□ -1.51
SCARNA6.1-201ENST00000516989 BTN3A3O00478 584 aa5.61□□□□□ -1.51
SCARNA6.1-201ENST00000516989 NTN3O00634 580 aaPredicted RBP5.61□□□□□ -1.51
SCARNA6.1-201ENST00000516989 PHGDHO43175 533 aaKnown RBP5.61□□□□□ -1.51
SCARNA6.1-201ENST00000516989 HYAL3O43820 417 aaPredicted RBP5.61□□□□□ -1.51
SCARNA6.1-201ENST00000516989 CSO75390 466 aaKnown RBP5.61□□□□□ -1.51
SCARNA6.1-201ENST00000516989 TCEA3O75764 348 aa5.61□□□□□ -1.51
SCARNA6.1-201ENST00000516989 MATN4O95460 622 aa5.61□□□□□ -1.51
SCARNA6.1-201ENST00000516989 C1orf105O95561 183 aa5.61□□□□□ -1.51
SCARNA6.1-201ENST00000516989 CATP04040 527 aaKnown RBP5.61□□□□□ -1.51
SCARNA6.1-201ENST00000516989 ABHD2P08910 425 aa5.61□□□□□ -1.51
SCARNA6.1-201ENST00000516989 CCDC166P0CW27 439 aa5.61□□□□□ -1.51
SCARNA6.1-201ENST00000516989 CBSLP0DN79 551 aa5.61□□□□□ -1.51
SCARNA6.1-201ENST00000516989 STMN1P16949 149 aa5.61□□□□□ -1.51
SCARNA6.1-201ENST00000516989 KRT15P19012 456 aa5.61□□□□□ -1.51
SCARNA6.1-201ENST00000516989 POLR2CP19387 275 aaPredicted RBP5.61□□□□□ -1.51
SCARNA6.1-201ENST00000516989 SPINK2P20155 84 aa5.61□□□□□ -1.51
SCARNA6.1-201ENST00000516989 CD9P21926 228 aa5.61□□□□□ -1.51
SCARNA6.1-201ENST00000516989 TYK2P29597 1187 aa5.61□□□□□ -1.51
SCARNA6.1-201ENST00000516989 ATP5DP30049 168 aa5.61□□□□□ -1.51
SCARNA6.1-201ENST00000516989 CBSP35520 551 aa5.61□□□□□ -1.51
SCARNA6.1-201ENST00000516989 BDKRB1P46663 353 aa5.61□□□□□ -1.51
SCARNA6.1-201ENST00000516989 SERPINB9P50453 376 aa5.61□□□□□ -1.51
SCARNA6.1-201ENST00000516989 LIMK2P53671 638 aa5.61□□□□□ -1.51
SCARNA6.1-201ENST00000516989 INHBCP55103 352 aa5.61□□□□□ -1.51
SCARNA6.1-201ENST00000516989 RP1P56715 2156 aa5.61□□□□□ -1.51
SCARNA6.1-201ENST00000516989 RAB10P61026 200 aa5.61□□□□□ -1.51
SCARNA6.1-201ENST00000516989 TEKQ02763 1124 aa5.61□□□□□ -1.51
SCARNA6.1-201ENST00000516989 EGR3Q06889 387 aa5.61□□□□□ -1.51
SCARNA6.1-201ENST00000516989 TP53BP1Q12888 1972 aaPredicted RBP5.61□□□□□ -1.51
SCARNA6.1-201ENST00000516989 TARDBPQ13148 414 aaKnown RBP eCLIP5.61□□□□□ -1.51
SCARNA6.1-201ENST00000516989 TSTA3Q13630 321 aaPredicted RBP5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms