RNA–Protein interactions for RNA: ENST00000516850.1

RNU6-1088P-201, Transcript of RNA, U6 small nuclear 1088, pseudogene, humanhuman

BASIC

Gene RNU6-1088P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1088P-201ENST00000516850 SERAC1Q96JX3 654 aa2.2□□□□□ -2.06
RNU6-1088P-201ENST00000516850 FAM71F1Q96KD3 344 aaPredicted RBP2.2□□□□□ -2.06
RNU6-1088P-201ENST00000516850 C2orf48Q96LS8 159 aa2.2□□□□□ -2.06
RNU6-1088P-201ENST00000516850 CCDC3Q9BQI4 270 aa2.2□□□□□ -2.06
RNU6-1088P-201ENST00000516850 ABCB10Q9NRK6 738 aa2.2□□□□□ -2.06
RNU6-1088P-201ENST00000516850 STAU2Q9NUL3 570 aaKnown RBP eCLIP2.2□□□□□ -2.06
RNU6-1088P-201ENST00000516850 GIMAP4Q9NUV9 329 aa2.2□□□□□ -2.06
RNU6-1088P-201ENST00000516850 HAUS2Q9NVX0 235 aa2.2□□□□□ -2.06
RNU6-1088P-201ENST00000516850 NLGN3Q9NZ94 848 aa2.2□□□□□ -2.06
RNU6-1088P-201ENST00000516850 THAP10Q9P2Z0 257 aaPredicted RBP2.2□□□□□ -2.06
RNU6-1088P-201ENST00000516850 B4GALT7Q9UBV7 327 aa2.2□□□□□ -2.06
RNU6-1088P-201ENST00000516850 IL17BQ9UHF5 180 aa2.2□□□□□ -2.06
RNU6-1088P-201ENST00000516850 DDX25Q9UHL0 483 aaKnown RBP2.2□□□□□ -2.06
RNU6-1088P-201ENST00000516850 SLC24A2Q9UI40 661 aa2.2□□□□□ -2.06
RNU6-1088P-201ENST00000516850 CPSF3Q9UKF6 684 aaKnown RBP2.2□□□□□ -2.06
RNU6-1088P-201ENST00000516850 ELF5Q9UKW6 265 aaPredicted RBP2.2□□□□□ -2.06
RNU6-1088P-201ENST00000516850 NOTCH2Q04721 2471 aa2.2□□□□□ -2.06
RNU6-1088P-201ENST00000516850 TRBV5-5A0A0J9YX44 114 aa2.19□□□□□ -2.06
RNU6-1088P-201ENST00000516850 A6NCN8 305 aa2.19□□□□□ -2.06
RNU6-1088P-201ENST00000516850 NPIPB9F8W1W9 429 aa2.19□□□□□ -2.06
RNU6-1088P-201ENST00000516850 LRCH4O75427 683 aa2.19□□□□□ -2.06
RNU6-1088P-201ENST00000516850 SLCO2B1O94956 709 aa2.19□□□□□ -2.06
RNU6-1088P-201ENST00000516850 ATP1B1P05026 303 aa2.19□□□□□ -2.06
RNU6-1088P-201ENST00000516850 RAB40ALP0C0E4 278 aa2.19□□□□□ -2.06
RNU6-1088P-201ENST00000516850 LINGO3P0C6S8 592 aa2.19□□□□□ -2.06
RNU6-1088P-201ENST00000516850 KLK2P20151 261 aa2.19□□□□□ -2.06
RNU6-1088P-201ENST00000516850 BCL3P20749 454 aa2.19□□□□□ -2.06
RNU6-1088P-201ENST00000516850 VAMP7P51809 220 aa2.19□□□□□ -2.06
RNU6-1088P-201ENST00000516850 DCDC1P59894 354 aa2.19□□□□□ -2.06
RNU6-1088P-201ENST00000516850 ERVK-16P61578 105 aa2.19□□□□□ -2.06
RNU6-1088P-201ENST00000516850 CHAF1BQ13112 559 aa2.19□□□□□ -2.06
RNU6-1088P-201ENST00000516850 ITGA7Q13683 1181 aa2.19□□□□□ -2.06
RNU6-1088P-201ENST00000516850 OPCMLQ14982 345 aa2.19□□□□□ -2.06
RNU6-1088P-201ENST00000516850 C3AR1Q16581 482 aa2.19□□□□□ -2.06
RNU6-1088P-201ENST00000516850 CBWD6Q4V339 395 aa2.19□□□□□ -2.06
RNU6-1088P-201ENST00000516850 CBWD3Q5JTY5 395 aa2.19□□□□□ -2.06
RNU6-1088P-201ENST00000516850 SPECC1Q5M775 1068 aa2.19□□□□□ -2.06
RNU6-1088P-201ENST00000516850 FAM180BQ6P0A1 224 aa2.19□□□□□ -2.06
RNU6-1088P-201ENST00000516850 SZRD1Q7Z422 152 aa2.19□□□□□ -2.06
RNU6-1088P-201ENST00000516850 ZNF595Q8IYB9 648 aa2.19□□□□□ -2.06
RNU6-1088P-201ENST00000516850 TSPAN14Q8NG11 270 aa2.19□□□□□ -2.06
RNU6-1088P-201ENST00000516850 OR10S1Q8NGN2 331 aa2.19□□□□□ -2.06
RNU6-1088P-201ENST00000516850 NSMAFQ92636 917 aa2.19□□□□□ -2.06
RNU6-1088P-201ENST00000516850 MOB3AQ96BX8 217 aa2.19□□□□□ -2.06
RNU6-1088P-201ENST00000516850 MRPL1Q9BYD6 325 aaKnown RBP2.19□□□□□ -2.06
RNU6-1088P-201ENST00000516850 ADNPQ9H2P0 1102 aa2.19□□□□□ -2.06
RNU6-1088P-201ENST00000516850 PNNQ9H307 717 aaKnown RBP2.19□□□□□ -2.06
RNU6-1088P-201ENST00000516850 JPT2Q9H910 190 aa2.19□□□□□ -2.06
RNU6-1088P-201ENST00000516850 WDR83OSQ9Y284 106 aa2.19□□□□□ -2.06
RNU6-1088P-201ENST00000516850 ITIH6Q6UXX5 1313 aa2.18□□□□□ -2.06
RNU6-1088P-201ENST00000516850 A0A087WWV3 80 aa2.18□□□□□ -2.06
RNU6-1088P-201ENST00000516850 FEZF1A0PJY2 475 aa2.18□□□□□ -2.06
RNU6-1088P-201ENST00000516850 ZNF840PA6NDX5 716 aa2.18□□□□□ -2.06
RNU6-1088P-201ENST00000516850 HAT1O14929 419 aa2.18□□□□□ -2.06
RNU6-1088P-201ENST00000516850 PHF1O43189 567 aaPredicted RBP2.18□□□□□ -2.06
RNU6-1088P-201ENST00000516850 SH3BGRLO75368 114 aa2.18□□□□□ -2.06
RNU6-1088P-201ENST00000516850 BAIAP3O94812 1187 aa2.18□□□□□ -2.06
RNU6-1088P-201ENST00000516850 SAGP10523 405 aaPredicted RBP2.18□□□□□ -2.06
RNU6-1088P-201ENST00000516850 TRA2BP62995 288 aaKnown RBP2.18□□□□□ -2.06
RNU6-1088P-201ENST00000516850 FKBP3Q00688 224 aaKnown RBP2.18□□□□□ -2.06
RNU6-1088P-201ENST00000516850 POU5F1Q01860 360 aaKnown RBP2.18□□□□□ -2.06
RNU6-1088P-201ENST00000516850 CUL3Q13618 768 aa2.18□□□□□ -2.06
RNU6-1088P-201ENST00000516850 RFTN1Q14699 578 aaPredicted RBP2.18□□□□□ -2.06
RNU6-1088P-201ENST00000516850 ZNF146Q15072 292 aa2.18□□□□□ -2.06
RNU6-1088P-201ENST00000516850 GPR33Q49SQ1 333 aa2.18□□□□□ -2.06
RNU6-1088P-201ENST00000516850 PRR27Q6MZM9 219 aa2.18□□□□□ -2.06
RNU6-1088P-201ENST00000516850 CTR9Q6PD62 1173 aa2.18□□□□□ -2.06
RNU6-1088P-201ENST00000516850 SLC24A5Q71RS6 500 aa2.18□□□□□ -2.06
RNU6-1088P-201ENST00000516850 GPC2Q8N158 579 aa2.18□□□□□ -2.06
RNU6-1088P-201ENST00000516850 MINDY1Q8N5J2 469 aa2.18□□□□□ -2.06
RNU6-1088P-201ENST00000516850 KLHL30-AS1Q8NEE0 82 aa2.18□□□□□ -2.06
RNU6-1088P-201ENST00000516850 OR10Q1Q8NGQ4 319 aa2.18□□□□□ -2.06
RNU6-1088P-201ENST00000516850 SPPL2AQ8TCT8 520 aa2.18□□□□□ -2.06
RNU6-1088P-201ENST00000516850 ZNF622Q969S3 477 aaKnown RBP eCLIP2.18□□□□□ -2.06
RNU6-1088P-201ENST00000516850 FAM218AQ96MZ4 157 aa2.18□□□□□ -2.06
RNU6-1088P-201ENST00000516850 CDCA3Q99618 268 aaPredicted RBP2.18□□□□□ -2.06
RNU6-1088P-201ENST00000516850 RBM24Q9BX46 236 aaKnown RBP2.18□□□□□ -2.06
RNU6-1088P-201ENST00000516850 MYNNQ9NPC7 610 aa2.18□□□□□ -2.06
RNU6-1088P-201ENST00000516850 FRMD4AQ9P2Q2 1039 aaPredicted RBP2.18□□□□□ -2.06
RNU6-1088P-201ENST00000516850 POMT2Q9UKY4 750 aa2.18□□□□□ -2.06
RNU6-1088P-201ENST00000516850 PPIEQ9UNP9 301 aaKnown RBP2.18□□□□□ -2.06
RNU6-1088P-201ENST00000516850 RALGAPA1Q6GYQ0 2036 aa2.17□□□□□ -2.06
RNU6-1088P-201ENST00000516850 PDHXO00330 501 aa2.17□□□□□ -2.06
RNU6-1088P-201ENST00000516850 CREB3O43889 395 aa2.17□□□□□ -2.06
RNU6-1088P-201ENST00000516850 SNX3O60493 162 aa2.17□□□□□ -2.06
RNU6-1088P-201ENST00000516850 DOK2O60496 412 aa2.17□□□□□ -2.06
RNU6-1088P-201ENST00000516850 CSH1P0DML2 217 aa2.17□□□□□ -2.06
RNU6-1088P-201ENST00000516850 CSH2P0DML3 217 aa2.17□□□□□ -2.06
RNU6-1088P-201ENST00000516850 PCP11498 1178 aaKnown RBP2.17□□□□□ -2.06
RNU6-1088P-201ENST00000516850 FDPSP14324 419 aaKnown RBP2.17□□□□□ -2.06
RNU6-1088P-201ENST00000516850 MPZP25189 248 aa2.17□□□□□ -2.06
RNU6-1088P-201ENST00000516850 DRD3P35462 400 aa2.17□□□□□ -2.06
RNU6-1088P-201ENST00000516850 HLCSP50747 726 aa2.17□□□□□ -2.06
RNU6-1088P-201ENST00000516850 CLNS1AP54105 237 aaKnown RBP2.17□□□□□ -2.06
RNU6-1088P-201ENST00000516850 LYZP61626 148 aa2.17□□□□□ -2.06
RNU6-1088P-201ENST00000516850 EPS8Q12929 822 aa2.17□□□□□ -2.06
RNU6-1088P-201ENST00000516850 PCLAFQ15004 111 aa2.17□□□□□ -2.06
RNU6-1088P-201ENST00000516850 WTAPQ15007 396 aa2.17□□□□□ -2.06
RNU6-1088P-201ENST00000516850 ALDH1L2Q3SY69 923 aa2.17□□□□□ -2.06
RNU6-1088P-201ENST00000516850 RILPL1Q5EBL4 403 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms