RNA–Protein interactions for RNA: ENST00000514267.1

CALCOCO2-223, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-223ENST00000514267 TSPY4P0CV99 314 aa3.18□□□□□ -1.9
CALCOCO2-223ENST00000514267 TSPY10P0CW01 314 aa3.18□□□□□ -1.9
CALCOCO2-223ENST00000514267 HSPA8P11142 646 aaKnown RBP3.18□□□□□ -1.9
CALCOCO2-223ENST00000514267 KRT3P12035 628 aa3.18□□□□□ -1.9
CALCOCO2-223ENST00000514267 ITGA2P17301 1181 aa3.18□□□□□ -1.9
CALCOCO2-223ENST00000514267 CKMT2P17540 419 aa3.18□□□□□ -1.9
CALCOCO2-223ENST00000514267 MNDAP41218 407 aa3.18□□□□□ -1.9
CALCOCO2-223ENST00000514267 GSDMDP57764 484 aa3.18□□□□□ -1.9
CALCOCO2-223ENST00000514267 KRTAP10-6P60371 365 aaPredicted RBP3.18□□□□□ -1.9
CALCOCO2-223ENST00000514267 ISL1P61371 349 aa3.18□□□□□ -1.9
CALCOCO2-223ENST00000514267 RELQ04864 619 aaPredicted RBP3.18□□□□□ -1.9
CALCOCO2-223ENST00000514267 RBBP7Q16576 425 aa3.18□□□□□ -1.9
CALCOCO2-223ENST00000514267 PHKG1Q16816 387 aa3.18□□□□□ -1.9
CALCOCO2-223ENST00000514267 SUSD4Q5VX71 490 aa3.18□□□□□ -1.9
CALCOCO2-223ENST00000514267 BTNL8Q6UX41 500 aa3.18□□□□□ -1.9
CALCOCO2-223ENST00000514267 FAM43BQ6ZT52 329 aaPredicted RBP3.18□□□□□ -1.9
CALCOCO2-223ENST00000514267 MIER3Q7Z3K6 550 aa3.18□□□□□ -1.9
CALCOCO2-223ENST00000514267 GPR141Q7Z602 305 aa3.18□□□□□ -1.9
CALCOCO2-223ENST00000514267 SLC9B2Q86UD5 537 aa3.18□□□□□ -1.9
CALCOCO2-223ENST00000514267 ODF3L1Q8IXM7 274 aa3.18□□□□□ -1.9
CALCOCO2-223ENST00000514267 CFAP206Q8IYR0 622 aa3.18□□□□□ -1.9
CALCOCO2-223ENST00000514267 SFRP1Q8N474 314 aa3.18□□□□□ -1.9
CALCOCO2-223ENST00000514267 RFLNBQ8N5W9 214 aa3.18□□□□□ -1.9
CALCOCO2-223ENST00000514267 MRPL43Q8N983 215 aaKnown RBP3.18□□□□□ -1.9
CALCOCO2-223ENST00000514267 NOA1Q8NC60 698 aaKnown RBP3.18□□□□□ -1.9
CALCOCO2-223ENST00000514267 OR4K1Q8NGD4 311 aa3.18□□□□□ -1.9
CALCOCO2-223ENST00000514267 LNX1Q8TBB1 728 aaPredicted RBP3.18□□□□□ -1.9
CALCOCO2-223ENST00000514267 LRRC8CQ8TDW0 803 aa3.18□□□□□ -1.9
CALCOCO2-223ENST00000514267 THOC1Q96FV9 657 aaKnown RBP3.18□□□□□ -1.9
CALCOCO2-223ENST00000514267 PGM2Q96G03 612 aa3.18□□□□□ -1.9
CALCOCO2-223ENST00000514267 CDKN2AIPNLQ96HQ2 116 aa3.18□□□□□ -1.9
CALCOCO2-223ENST00000514267 FAM71F1Q96KD3 344 aaPredicted RBP3.18□□□□□ -1.9
CALCOCO2-223ENST00000514267 GDAP1L1Q96MZ0 367 aa3.18□□□□□ -1.9
CALCOCO2-223ENST00000514267 RUFY1Q96T51 708 aa3.18□□□□□ -1.9
CALCOCO2-223ENST00000514267 C1QTNF4Q9BXJ3 329 aa3.18□□□□□ -1.9
CALCOCO2-223ENST00000514267 SLC2A11Q9BYW1 496 aa3.18□□□□□ -1.9
CALCOCO2-223ENST00000514267 OSBPL8Q9BZF1 889 aa3.18□□□□□ -1.9
CALCOCO2-223ENST00000514267 XPO4Q9C0E2 1151 aaKnown RBP3.18□□□□□ -1.9
CALCOCO2-223ENST00000514267 MTMR12Q9C0I1 747 aa3.18□□□□□ -1.9
CALCOCO2-223ENST00000514267 ABCG8Q9H221 673 aa3.18□□□□□ -1.9
CALCOCO2-223ENST00000514267 UBQLN3Q9H347 655 aa3.18□□□□□ -1.9
CALCOCO2-223ENST00000514267 ACTL8Q9H568 366 aa3.18□□□□□ -1.9
CALCOCO2-223ENST00000514267 GPR173Q9NS66 373 aa3.18□□□□□ -1.9
CALCOCO2-223ENST00000514267 DNAJC11Q9NVH1 559 aa3.18□□□□□ -1.9
CALCOCO2-223ENST00000514267 HPF1Q9NWY4 346 aa3.18□□□□□ -1.9
CALCOCO2-223ENST00000514267 PKD2L2Q9NZM6 624 aa3.18□□□□□ -1.9
CALCOCO2-223ENST00000514267 JRKLQ9Y4A0 524 aa3.18□□□□□ -1.9
CALCOCO2-223ENST00000514267 KIAA0556O60303 1618 aa3.18□□□□□ -1.9
CALCOCO2-223ENST00000514267 RAPGEF6Q8TEU7 1601 aa3.18□□□□□ -1.9
CALCOCO2-223ENST00000514267 NAIPQ13075 1403 aa3.18□□□□□ -1.9
CALCOCO2-223ENST00000514267 PTPRKQ15262 1439 aa3.18□□□□□ -1.9
CALCOCO2-223ENST00000514267 MIA2Q96PC5 1412 aa3.18□□□□□ -1.9
CALCOCO2-223ENST00000514267 A0A0G2JPF8 293 aa3.17□□□□□ -1.9
CALCOCO2-223ENST00000514267 A0A1W2PN81 502 aa3.17□□□□□ -1.9
CALCOCO2-223ENST00000514267 A0A1W2PPI3 338 aa3.17□□□□□ -1.9
CALCOCO2-223ENST00000514267 KRT87PA6NCN2 255 aa3.17□□□□□ -1.9
CALCOCO2-223ENST00000514267 HNRNPCL3B7ZW38 293 aa3.17□□□□□ -1.9
CALCOCO2-223ENST00000514267 F8VVB4 439 aa3.17□□□□□ -1.9
CALCOCO2-223ENST00000514267 F8VWA3 439 aa3.17□□□□□ -1.9
CALCOCO2-223ENST00000514267 ARPC2O15144 300 aa3.17□□□□□ -1.9
CALCOCO2-223ENST00000514267 SYNGR3O43761 229 aa3.17□□□□□ -1.9
CALCOCO2-223ENST00000514267 PRDM1O75626 825 aa3.17□□□□□ -1.9
CALCOCO2-223ENST00000514267 ZNF432O94892 652 aa3.17□□□□□ -1.9
CALCOCO2-223ENST00000514267 LETM1O95202 739 aaPredicted RBP3.17□□□□□ -1.9
CALCOCO2-223ENST00000514267 KRT19P08727 400 aa3.17□□□□□ -1.9
CALCOCO2-223ENST00000514267 ANKRD34CP0C6C1 535 aa3.17□□□□□ -1.9
CALCOCO2-223ENST00000514267 HNRNPCL4P0DMR1 293 aa3.17□□□□□ -1.9
CALCOCO2-223ENST00000514267 ACP2P11117 423 aa3.17□□□□□ -1.9
CALCOCO2-223ENST00000514267 PCP11498 1178 aaKnown RBP3.17□□□□□ -1.9
CALCOCO2-223ENST00000514267 HLA-DOBP13765 273 aa3.17□□□□□ -1.9
CALCOCO2-223ENST00000514267 ZNF12P17014 697 aa3.17□□□□□ -1.9
CALCOCO2-223ENST00000514267 CYP2A7P20853 494 aa3.17□□□□□ -1.9
CALCOCO2-223ENST00000514267 PIK3R1P27986 724 aa3.17□□□□□ -1.9
CALCOCO2-223ENST00000514267 CHRNA7P36544 502 aa3.17□□□□□ -1.9
CALCOCO2-223ENST00000514267 CD86P42081 329 aa3.17□□□□□ -1.9
CALCOCO2-223ENST00000514267 SERPINH1P50454 418 aaKnown RBP3.17□□□□□ -1.9
CALCOCO2-223ENST00000514267 VAMP7P51809 220 aa3.17□□□□□ -1.9
CALCOCO2-223ENST00000514267 LUMP51884 338 aaPredicted RBP3.17□□□□□ -1.9
CALCOCO2-223ENST00000514267 THOP1P52888 689 aa3.17□□□□□ -1.9
CALCOCO2-223ENST00000514267 ERVFC1-1P60608 527 aa3.17□□□□□ -1.9
CALCOCO2-223ENST00000514267 AKAP17AQ02040 695 aaKnown RBP3.17□□□□□ -1.9
CALCOCO2-223ENST00000514267 IL10RBQ08334 325 aa3.17□□□□□ -1.9
CALCOCO2-223ENST00000514267 KIR2DS3Q14952 304 aa3.17□□□□□ -1.9
CALCOCO2-223ENST00000514267 ZRSR1Q15695 479 aaKnown RBP3.17□□□□□ -1.9
CALCOCO2-223ENST00000514267 STXBP2Q15833 593 aa3.17□□□□□ -1.9
CALCOCO2-223ENST00000514267 ODF4Q2M2E3 257 aa3.17□□□□□ -1.9
CALCOCO2-223ENST00000514267 ZNF672Q499Z4 452 aaPredicted RBP3.17□□□□□ -1.9
CALCOCO2-223ENST00000514267 GFI1BQ5VTD9 330 aa3.17□□□□□ -1.9
CALCOCO2-223ENST00000514267 LYSMD4Q5XG99 296 aa3.17□□□□□ -1.9
CALCOCO2-223ENST00000514267 KCTD11Q693B1 232 aa3.17□□□□□ -1.9
CALCOCO2-223ENST00000514267 PODNL1Q6PEZ8 512 aa3.17□□□□□ -1.9
CALCOCO2-223ENST00000514267 ANKRD33Q7Z3H0 272 aa3.17□□□□□ -1.9
CALCOCO2-223ENST00000514267 SATL1Q86VE3 508 aa3.17□□□□□ -1.9
CALCOCO2-223ENST00000514267 ZNF410Q86VK4 478 aa3.17□□□□□ -1.9
CALCOCO2-223ENST00000514267 NR2C2APQ86WQ0 139 aa3.17□□□□□ -1.9
CALCOCO2-223ENST00000514267 SFR1Q86XK3 245 aa3.17□□□□□ -1.9
CALCOCO2-223ENST00000514267 CRYBG2Q8N1P7 616 aa3.17□□□□□ -1.9
CALCOCO2-223ENST00000514267 ST7LQ8TDW4 575 aa3.17□□□□□ -1.9
CALCOCO2-223ENST00000514267 SLC13A3Q8WWT9 602 aa3.17□□□□□ -1.9
CALCOCO2-223ENST00000514267 TAF4BQ92750 862 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms