RNA–Protein interactions for RNA: ENST00000513806.1

HTT-213, Transcript of huntingtin, humanhuman

TSL 5

Gene HTT, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-213ENST00000513806 PAIP2Q9BPZ3 127 aaKnown RBP10.87□□□□□ -0.67
HTT-213ENST00000513806 PLCD4Q9BRC7 762 aa10.87□□□□□ -0.67
HTT-213ENST00000513806 SHCBP1LQ9BZQ2 653 aa10.87□□□□□ -0.67
HTT-213ENST00000513806 SPRTNQ9H040 489 aaPredicted RBP10.87□□□□□ -0.67
HTT-213ENST00000513806 ZBTB26Q9HCK0 441 aa10.87□□□□□ -0.67
HTT-213ENST00000513806 SEMA4BQ9NPR2 832 aaPredicted RBP10.87□□□□□ -0.67
HTT-213ENST00000513806 COPG2Q9UBF2 871 aa10.87□□□□□ -0.67
HTT-213ENST00000513806 OPTCQ9UBM4 332 aa10.87□□□□□ -0.67
HTT-213ENST00000513806 PCTPQ9UKL6 214 aa10.87□□□□□ -0.67
HTT-213ENST00000513806 ANGPTL3Q9Y5C1 460 aa10.87□□□□□ -0.67
HTT-213ENST00000513806 TMEM120BA0PK00 339 aa10.86□□□□□ -0.67
HTT-213ENST00000513806 OR2A25A4D2G3 310 aa10.86□□□□□ -0.67
HTT-213ENST00000513806 STX16-NPEPL1H3BU86 382 aa10.86□□□□□ -0.67
HTT-213ENST00000513806 STX16O14662 325 aa10.86□□□□□ -0.67
HTT-213ENST00000513806 PLD2O14939 933 aa10.86□□□□□ -0.67
HTT-213ENST00000513806 P2RX6O15547 441 aa10.86□□□□□ -0.67
HTT-213ENST00000513806 IPO13O94829 963 aaKnown RBP10.86□□□□□ -0.67
HTT-213ENST00000513806 CCNDBP1O95273 360 aa10.86□□□□□ -0.67
HTT-213ENST00000513806 EIF2S1P05198 315 aaKnown RBP10.86□□□□□ -0.67
HTT-213ENST00000513806 ADRB1P08588 477 aa10.86□□□□□ -0.67
HTT-213ENST00000513806 RPS17P08708 135 aaKnown RBP10.86□□□□□ -0.67
HTT-213ENST00000513806 JMJD7P0C870 316 aa10.86□□□□□ -0.67
HTT-213ENST00000513806 ZNF28P17035 718 aa10.86□□□□□ -0.67
HTT-213ENST00000513806 CCND1P24385 295 aa10.86□□□□□ -0.67
HTT-213ENST00000513806 BCL6P41182 706 aa10.86□□□□□ -0.67
HTT-213ENST00000513806 ETV4P43268 484 aa10.86□□□□□ -0.67
HTT-213ENST00000513806 CYP4F2P78329 520 aa10.86□□□□□ -0.67
HTT-213ENST00000513806 CHIT1Q13231 466 aa10.86□□□□□ -0.67
HTT-213ENST00000513806 TUBB3Q13509 450 aa10.86□□□□□ -0.67
HTT-213ENST00000513806 TRA2AQ13595 282 aaKnown RBP eCLIP10.86□□□□□ -0.67
HTT-213ENST00000513806 DOC2AQ14183 400 aa10.86□□□□□ -0.67
HTT-213ENST00000513806 SLBPQ14493 270 aaKnown RBP eCLIP10.86□□□□□ -0.67
HTT-213ENST00000513806 PCBP2Q15366 365 aaKnown RBP eCLIP10.86□□□□□ -0.67
HTT-213ENST00000513806 RBBP7Q16576 425 aa10.86□□□□□ -0.67
HTT-213ENST00000513806 PDK4Q16654 411 aa10.86□□□□□ -0.67
HTT-213ENST00000513806 CDKL4Q5MAI5 379 aa10.86□□□□□ -0.67
HTT-213ENST00000513806 ATG14Q6ZNE5 492 aa10.86□□□□□ -0.67
HTT-213ENST00000513806 SLCO4C1Q6ZQN7 724 aa10.86□□□□□ -0.67
HTT-213ENST00000513806 LCA5Q86VQ0 697 aa10.86□□□□□ -0.67
HTT-213ENST00000513806 MCATQ8IVS2 390 aaKnown RBP10.86□□□□□ -0.67
HTT-213ENST00000513806 AGBL5Q8NDL9 886 aa10.86□□□□□ -0.67
HTT-213ENST00000513806 OR52B6Q8NGF0 335 aa10.86□□□□□ -0.67
HTT-213ENST00000513806 WDR36Q8NI36 951 aaKnown RBP10.86□□□□□ -0.67
HTT-213ENST00000513806 TRPC4APQ8TEL6 797 aa10.86□□□□□ -0.67
HTT-213ENST00000513806 ZNF483Q8TF39 744 aaPredicted RBP10.86□□□□□ -0.67
HTT-213ENST00000513806 USP7Q93009 1102 aa10.86□□□□□ -0.67
HTT-213ENST00000513806 HAUS8Q9BT25 410 aa10.86□□□□□ -0.67
HTT-213ENST00000513806 PCBD2Q9H0N5 130 aa10.86□□□□□ -0.67
HTT-213ENST00000513806 GSTO2Q9H4Y5 243 aa10.86□□□□□ -0.67
HTT-213ENST00000513806 NOL11Q9H8H0 719 aaKnown RBP10.86□□□□□ -0.67
HTT-213ENST00000513806 CNOT10Q9H9A5 744 aaKnown RBP10.86□□□□□ -0.67
HTT-213ENST00000513806 PDE7BQ9NP56 450 aa10.86□□□□□ -0.67
HTT-213ENST00000513806 SLC39A1Q9NY26 324 aa10.86□□□□□ -0.67
HTT-213ENST00000513806 SENP1Q9P0U3 644 aa10.86□□□□□ -0.67
HTT-213ENST00000513806 PILRAQ9UKJ1 303 aa10.86□□□□□ -0.67
HTT-213ENST00000513806 BTRCQ9Y297 605 aa10.86□□□□□ -0.67
HTT-213ENST00000513806 CACNA1AO00555 2505 aa10.85□□□□□ -0.67
HTT-213ENST00000513806 TEX51A0A1B0GUA7 166 aa10.85□□□□□ -0.67
HTT-213ENST00000513806 TRABD2BA6NFA1 517 aa10.85□□□□□ -0.67
HTT-213ENST00000513806 C9orf172C9J069 976 aa10.85□□□□□ -0.67
HTT-213ENST00000513806 H0YGG7 62 aa10.85□□□□□ -0.67
HTT-213ENST00000513806 H3BQF6 201 aa10.85□□□□□ -0.67
HTT-213ENST00000513806 HGSO14964 777 aaPredicted RBP10.85□□□□□ -0.67
HTT-213ENST00000513806 PRPF4O43172 522 aaKnown RBP eCLIP10.85□□□□□ -0.67
HTT-213ENST00000513806 OR1F1O43749 312 aa10.85□□□□□ -0.67
HTT-213ENST00000513806 SH3BGRLO75368 114 aa10.85□□□□□ -0.67
HTT-213ENST00000513806 SUPT7LO94864 414 aa10.85□□□□□ -0.67
HTT-213ENST00000513806 TNFSF15O95150 251 aa10.85□□□□□ -0.67
HTT-213ENST00000513806 MED26O95402 600 aa10.85□□□□□ -0.67
HTT-213ENST00000513806 C1GALT1C1LP0DN25 315 aa10.85□□□□□ -0.67
HTT-213ENST00000513806 ARL1P40616 181 aaPredicted RBP10.85□□□□□ -0.67
HTT-213ENST00000513806 CCR8P51685 355 aa10.85□□□□□ -0.67
HTT-213ENST00000513806 PRKAA2P54646 552 aa10.85□□□□□ -0.67
HTT-213ENST00000513806 NAGLUP54802 743 aa10.85□□□□□ -0.67
HTT-213ENST00000513806 WDR4P57081 412 aaKnown RBP10.85□□□□□ -0.67
HTT-213ENST00000513806 VSX2P58304 361 aaPredicted RBP10.85□□□□□ -0.67
HTT-213ENST00000513806 ARF3P61204 181 aaPredicted RBP10.85□□□□□ -0.67
HTT-213ENST00000513806 HERVK_113P63132 956 aa10.85□□□□□ -0.67
HTT-213ENST00000513806 ABATP80404 500 aa10.85□□□□□ -0.67
HTT-213ENST00000513806 REEP5Q00765 189 aa10.85□□□□□ -0.67
HTT-213ENST00000513806 RBBP5Q15291 538 aaKnown RBP10.85□□□□□ -0.67
HTT-213ENST00000513806 HKDC1Q2TB90 917 aa10.85□□□□□ -0.67
HTT-213ENST00000513806 XKR6Q5GH73 641 aa10.85□□□□□ -0.67
HTT-213ENST00000513806 RNF44Q7L0R7 432 aa10.85□□□□□ -0.67
HTT-213ENST00000513806 MYLK4Q86YV6 388 aaPredicted RBP10.85□□□□□ -0.67
HTT-213ENST00000513806 ZUFSPQ96AP4 578 aa10.85□□□□□ -0.67
HTT-213ENST00000513806 ZNF501Q96CX3 271 aaPredicted RBP10.85□□□□□ -0.67
HTT-213ENST00000513806 TCTN2Q96GX1 697 aa10.85□□□□□ -0.67
HTT-213ENST00000513806 CMKLR1Q99788 373 aa10.85□□□□□ -0.67
HTT-213ENST00000513806 GATA5Q9BWX5 397 aaPredicted RBP10.85□□□□□ -0.67
HTT-213ENST00000513806 ERVK-6Q9BXR3 956 aa10.85□□□□□ -0.67
HTT-213ENST00000513806 ZNF395Q9H8N7 513 aaPredicted RBP10.85□□□□□ -0.67
HTT-213ENST00000513806 IPPKQ9H8X2 491 aa10.85□□□□□ -0.67
HTT-213ENST00000513806 TNFRSF12AQ9NP84 129 aa10.85□□□□□ -0.67
HTT-213ENST00000513806 FGF21Q9NSA1 209 aa10.85□□□□□ -0.67
HTT-213ENST00000513806 TMEM184CQ9NVA4 438 aa10.85□□□□□ -0.67
HTT-213ENST00000513806 OXSMQ9NWU1 459 aa10.85□□□□□ -0.67
HTT-213ENST00000513806 IRAK4Q9NWZ3 460 aa10.85□□□□□ -0.67
HTT-213ENST00000513806 GEMIN8Q9NWZ8 242 aaKnown RBP10.85□□□□□ -0.67
HTT-213ENST00000513806 FOXJ2Q9P0K8 574 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms