RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 KNTC1P50748 2209 aa8.8□□□□□ -1
NR1I3-228ENST00000511676 PDZK1P1A8MUH7 402 aa8.79□□□□□ -1
NR1I3-228ENST00000511676 TMEM233B4DJY2 109 aa8.79□□□□□ -1
NR1I3-228ENST00000511676 H0Y8X5 98 aa8.79□□□□□ -1
NR1I3-228ENST00000511676 TLR4O00206 839 aa8.79□□□□□ -1
NR1I3-228ENST00000511676 MANBAO00462 879 aa8.79□□□□□ -1
NR1I3-228ENST00000511676 PPP6CO00743 305 aa8.79□□□□□ -1
NR1I3-228ENST00000511676 SKAP2O75563 359 aaPredicted RBP8.79□□□□□ -1
NR1I3-228ENST00000511676 DNAJC8O75937 253 aaPredicted RBP8.79□□□□□ -1
NR1I3-228ENST00000511676 RSL1D1O76021 490 aaKnown RBP8.79□□□□□ -1
NR1I3-228ENST00000511676 CSF2P04141 144 aa8.79□□□□□ -1
NR1I3-228ENST00000511676 CAPN1P07384 714 aa8.79□□□□□ -1
NR1I3-228ENST00000511676 THRAP10827 490 aa8.79□□□□□ -1
NR1I3-228ENST00000511676 F3P13726 295 aa8.79□□□□□ -1
NR1I3-228ENST00000511676 EZRP15311 586 aaKnown RBP8.79□□□□□ -1
NR1I3-228ENST00000511676 NME1P15531 152 aaKnown RBP8.79□□□□□ -1
NR1I3-228ENST00000511676 CKMT2P17540 419 aa8.79□□□□□ -1
NR1I3-228ENST00000511676 CXCR2P25025 360 aa8.79□□□□□ -1
NR1I3-228ENST00000511676 GDF5P43026 501 aa8.79□□□□□ -1
NR1I3-228ENST00000511676 TBPL1P62380 186 aa8.79□□□□□ -1
NR1I3-228ENST00000511676 RHDQ02161 417 aa8.79□□□□□ -1
NR1I3-228ENST00000511676 IRF8Q02556 426 aa8.79□□□□□ -1
NR1I3-228ENST00000511676 CYP4F3Q08477 520 aa8.79□□□□□ -1
NR1I3-228ENST00000511676 NAE1Q13564 534 aa8.79□□□□□ -1
NR1I3-228ENST00000511676 FZD2Q14332 565 aa8.79□□□□□ -1
NR1I3-228ENST00000511676 RPE65Q16518 533 aa8.79□□□□□ -1
NR1I3-228ENST00000511676 ZXDCQ2QGD7 858 aaPredicted RBP8.79□□□□□ -1
NR1I3-228ENST00000511676 COL28A1Q2UY09 1125 aa8.79□□□□□ -1
NR1I3-228ENST00000511676 GLIPR1L2Q4G1C9 344 aa8.79□□□□□ -1
NR1I3-228ENST00000511676 ATP6AP1LQ52LC2 224 aa8.79□□□□□ -1
NR1I3-228ENST00000511676 VWA5B1Q5TIE3 1220 aa8.79□□□□□ -1
NR1I3-228ENST00000511676 FRG2Q64ET8 278 aa8.79□□□□□ -1
NR1I3-228ENST00000511676 ATG9BQ674R7 924 aa8.79□□□□□ -1
NR1I3-228ENST00000511676 MBOAT1Q6ZNC8 495 aa8.79□□□□□ -1
NR1I3-228ENST00000511676 SLCO4C1Q6ZQN7 724 aa8.79□□□□□ -1
NR1I3-228ENST00000511676 RPS27LQ71UM5 84 aaKnown RBP8.79□□□□□ -1
NR1I3-228ENST00000511676 SLCO6A1Q86UG4 719 aa8.79□□□□□ -1
NR1I3-228ENST00000511676 SPNS2Q8IVW8 549 aa8.79□□□□□ -1
NR1I3-228ENST00000511676 DDIASQ8IXT1 998 aa8.79□□□□□ -1
NR1I3-228ENST00000511676 CDYL2Q8N8U2 506 aa8.79□□□□□ -1
NR1I3-228ENST00000511676 OR5AR1Q8NGP9 310 aa8.79□□□□□ -1
NR1I3-228ENST00000511676 RP9Q8TA86 221 aaKnown RBP8.79□□□□□ -1
NR1I3-228ENST00000511676 C1orf216Q8TAB5 229 aa8.79□□□□□ -1
NR1I3-228ENST00000511676 SLC22A18Q96BI1 424 aa8.79□□□□□ -1
NR1I3-228ENST00000511676 MOCOSQ96EN8 888 aa8.79□□□□□ -1
NR1I3-228ENST00000511676 NSL1Q96IY1 281 aa8.79□□□□□ -1
NR1I3-228ENST00000511676 CNDP2Q96KP4 475 aaKnown RBP8.79□□□□□ -1
NR1I3-228ENST00000511676 CAMK1GQ96NX5 476 aa8.79□□□□□ -1
NR1I3-228ENST00000511676 FRG2BQ96QU4 278 aa8.79□□□□□ -1
NR1I3-228ENST00000511676 INSM2Q96T92 566 aaPredicted RBP8.79□□□□□ -1
NR1I3-228ENST00000511676 MENTQ9BUN1 341 aa8.79□□□□□ -1
NR1I3-228ENST00000511676 SHCBP1LQ9BZQ2 653 aa8.79□□□□□ -1
NR1I3-228ENST00000511676 BRINP2Q9C0B6 783 aa8.79□□□□□ -1
NR1I3-228ENST00000511676 ABCG4Q9H172 646 aa8.79□□□□□ -1
NR1I3-228ENST00000511676 LRMDAQ9H2I8 198 aa8.79□□□□□ -1
NR1I3-228ENST00000511676 MMADHCQ9H3L0 296 aaPredicted RBP8.79□□□□□ -1
NR1I3-228ENST00000511676 OSGEPL1Q9H4B0 414 aa8.79□□□□□ -1
NR1I3-228ENST00000511676 TUBB1Q9H4B7 451 aa8.79□□□□□ -1
NR1I3-228ENST00000511676 WDR55Q9H6Y2 383 aaPredicted RBP8.79□□□□□ -1
NR1I3-228ENST00000511676 NT5DC2Q9H857 520 aa8.79□□□□□ -1
NR1I3-228ENST00000511676 UCK1Q9HA47 277 aa8.79□□□□□ -1
NR1I3-228ENST00000511676 SDR39U1Q9NRG7 319 aaPredicted RBP8.79□□□□□ -1
NR1I3-228ENST00000511676 INTS7Q9NVH2 962 aaKnown RBP8.79□□□□□ -1
NR1I3-228ENST00000511676 NMRK1Q9NWW6 199 aa8.79□□□□□ -1
NR1I3-228ENST00000511676 NDE1Q9NXR1 346 aa8.79□□□□□ -1
NR1I3-228ENST00000511676 FAM8A1Q9UBU6 413 aa8.79□□□□□ -1
NR1I3-228ENST00000511676 TSR3Q9UJK0 312 aaKnown RBP8.79□□□□□ -1
NR1I3-228ENST00000511676 MAPRE3Q9UPY8 281 aa8.79□□□□□ -1
NR1I3-228ENST00000511676 KCNK6Q9Y257 313 aa8.79□□□□□ -1
NR1I3-228ENST00000511676 SLC22A14Q9Y267 594 aa8.79□□□□□ -1
NR1I3-228ENST00000511676 DYRK1BQ9Y463 629 aa8.79□□□□□ -1
NR1I3-228ENST00000511676 PRKAB1Q9Y478 270 aa8.79□□□□□ -1
NR1I3-228ENST00000511676 SNX11Q9Y5W9 270 aa8.79□□□□□ -1
NR1I3-228ENST00000511676 URB1O60287 2271 aaKnown RBP8.79□□□□□ -1
NR1I3-228ENST00000511676 A0A1B0GTL3 188 aa8.78□□□□□ -1
NR1I3-228ENST00000511676 BBIP1A8MTZ0 92 aa8.78□□□□□ -1
NR1I3-228ENST00000511676 E9PBE3 544 aa8.78□□□□□ -1
NR1I3-228ENST00000511676 TMX2-CTNND1H3BSU7 103 aa8.78□□□□□ -1
NR1I3-228ENST00000511676 FOXE1O00358 373 aaPredicted RBP8.78□□□□□ -1
NR1I3-228ENST00000511676 LSM1O15116 133 aaKnown RBP8.78□□□□□ -1
NR1I3-228ENST00000511676 KLHL41O60662 606 aa8.78□□□□□ -1
NR1I3-228ENST00000511676 CAPNS1P04632 268 aa8.78□□□□□ -1
NR1I3-228ENST00000511676 JUNP05412 331 aaKnown RBP8.78□□□□□ -1
NR1I3-228ENST00000511676 GP1BAP07359 652 aa8.78□□□□□ -1
NR1I3-228ENST00000511676 C1GALT1C1LP0DN25 315 aa8.78□□□□□ -1
NR1I3-228ENST00000511676 ESRRAP11474 423 aaPredicted RBP8.78□□□□□ -1
NR1I3-228ENST00000511676 NPPBP16860 134 aa8.78□□□□□ -1
NR1I3-228ENST00000511676 XRCC1P18887 633 aaPredicted RBP8.78□□□□□ -1
NR1I3-228ENST00000511676 TSPAN8P19075 237 aa8.78□□□□□ -1
NR1I3-228ENST00000511676 NCF2P19878 526 aaPredicted RBP8.78□□□□□ -1
NR1I3-228ENST00000511676 MAPK1P28482 360 aa8.78□□□□□ -1
NR1I3-228ENST00000511676 PTPN4P29074 926 aa8.78□□□□□ -1
NR1I3-228ENST00000511676 PRDX3P30048 256 aaKnown RBP8.78□□□□□ -1
NR1I3-228ENST00000511676 ARL1P40616 181 aaPredicted RBP8.78□□□□□ -1
NR1I3-228ENST00000511676 ACTR1BP42025 376 aa8.78□□□□□ -1
NR1I3-228ENST00000511676 PIK3CBP42338 1070 aa8.78□□□□□ -1
NR1I3-228ENST00000511676 SCTRP47872 440 aa8.78□□□□□ -1
NR1I3-228ENST00000511676 FOXA1P55317 472 aa8.78□□□□□ -1
NR1I3-228ENST00000511676 ACTR1AP61163 376 aa8.78□□□□□ -1
NR1I3-228ENST00000511676 NCALDP61601 193 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms