RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 KRT5P13647 590 aa2.85□□□□□ -1.95
CHD1-207ENST00000511628 DARSP14868 501 aaKnown RBP2.85□□□□□ -1.95
CHD1-207ENST00000511628 LIFP15018 202 aa2.85□□□□□ -1.95
CHD1-207ENST00000511628 EFNA1P20827 205 aaPredicted RBP2.85□□□□□ -1.95
CHD1-207ENST00000511628 CDH3P22223 829 aa2.85□□□□□ -1.95
CHD1-207ENST00000511628 HSD17B3P37058 310 aa2.85□□□□□ -1.95
CHD1-207ENST00000511628 VAMP7P51809 220 aa2.85□□□□□ -1.95
CHD1-207ENST00000511628 IRX1P78414 480 aaPredicted RBP2.85□□□□□ -1.95
CHD1-207ENST00000511628 ITGA9Q13797 1035 aa2.85□□□□□ -1.95
CHD1-207ENST00000511628 HERC3Q15034 1050 aa2.85□□□□□ -1.95
CHD1-207ENST00000511628 CDO1Q16878 200 aa2.85□□□□□ -1.95
CHD1-207ENST00000511628 KIAA1644Q3SXP7 199 aa2.85□□□□□ -1.95
CHD1-207ENST00000511628 FAM174BQ3ZCQ3 159 aa2.85□□□□□ -1.95
CHD1-207ENST00000511628 GTDC1Q4AE62 458 aa2.85□□□□□ -1.95
CHD1-207ENST00000511628 FFAR4Q5NUL3 377 aa2.85□□□□□ -1.95
CHD1-207ENST00000511628 ZC2HC1BQ5TFG8 222 aa2.85□□□□□ -1.95
CHD1-207ENST00000511628 NOTUMQ6P988 496 aa2.85□□□□□ -1.95
CHD1-207ENST00000511628 PODNL1Q6PEZ8 512 aa2.85□□□□□ -1.95
CHD1-207ENST00000511628 C11orf88Q6PI97 169 aa2.85□□□□□ -1.95
CHD1-207ENST00000511628 ZNF497Q6ZNH5 498 aa2.85□□□□□ -1.95
CHD1-207ENST00000511628 LINC00696Q6ZRV3 163 aa2.85□□□□□ -1.95
CHD1-207ENST00000511628 DZIP1Q86YF9 867 aaKnown RBP2.85□□□□□ -1.95
CHD1-207ENST00000511628 DDHD1Q8NEL9 900 aa2.85□□□□□ -1.95
CHD1-207ENST00000511628 OR52N5Q8NH56 324 aa2.85□□□□□ -1.95
CHD1-207ENST00000511628 GRK7Q8WTQ7 553 aa2.85□□□□□ -1.95
CHD1-207ENST00000511628 PHLDA1Q8WV24 401 aaPredicted RBP2.85□□□□□ -1.95
CHD1-207ENST00000511628 NDNQ99608 321 aa2.85□□□□□ -1.95
CHD1-207ENST00000511628 ASCL2Q99929 193 aa2.85□□□□□ -1.95
CHD1-207ENST00000511628 TRIM51Q9BSJ1 452 aa2.85□□□□□ -1.95
CHD1-207ENST00000511628 URM1Q9BTM9 101 aaKnown RBP2.85□□□□□ -1.95
CHD1-207ENST00000511628 UTP14AQ9BVJ6 771 aaKnown RBP2.85□□□□□ -1.95
CHD1-207ENST00000511628 PRRG4Q9BZD6 226 aa2.85□□□□□ -1.95
CHD1-207ENST00000511628 UBXN6Q9BZV1 441 aa2.85□□□□□ -1.95
CHD1-207ENST00000511628 GSN-AS1Q9NRJ2 163 aa2.85□□□□□ -1.95
CHD1-207ENST00000511628 CNIH4Q9P003 139 aa2.85□□□□□ -1.95
CHD1-207ENST00000511628 TXNDC16Q9P2K2 825 aa2.85□□□□□ -1.95
CHD1-207ENST00000511628 ITGA11Q9UKX5 1188 aa2.85□□□□□ -1.95
CHD1-207ENST00000511628 CDH7Q9ULB5 785 aa2.85□□□□□ -1.95
CHD1-207ENST00000511628 HBS1LQ9Y450 684 aaKnown RBP2.85□□□□□ -1.95
CHD1-207ENST00000511628 MMP24Q9Y5R2 645 aa2.85□□□□□ -1.95
CHD1-207ENST00000511628 NOTCH3Q9UM47 2321 aa2.85□□□□□ -1.95
CHD1-207ENST00000511628 A0A1W2PN81 502 aa2.84□□□□□ -1.95
CHD1-207ENST00000511628 OOEPA6NGQ2 149 aa2.84□□□□□ -1.95
CHD1-207ENST00000511628 YDJCA8MPS7 323 aa2.84□□□□□ -1.95
CHD1-207ENST00000511628 ZNF197O14709 1029 aa2.84□□□□□ -1.95
CHD1-207ENST00000511628 FPGTO14772 594 aa2.84□□□□□ -1.95
CHD1-207ENST00000511628 ATP6V0E1O15342 81 aa2.84□□□□□ -1.95
CHD1-207ENST00000511628 FLRT2O43155 660 aa2.84□□□□□ -1.95
CHD1-207ENST00000511628 ARHGEF9O43307 516 aa2.84□□□□□ -1.95
CHD1-207ENST00000511628 STX6O43752 255 aa2.84□□□□□ -1.95
CHD1-207ENST00000511628 EXTL3O43909 919 aa2.84□□□□□ -1.95
CHD1-207ENST00000511628 SNX3O60493 162 aa2.84□□□□□ -1.95
CHD1-207ENST00000511628 RPS6KA5O75582 802 aa2.84□□□□□ -1.95
CHD1-207ENST00000511628 CD48P09326 243 aa2.84□□□□□ -1.95
CHD1-207ENST00000511628 IGHV4-31P0DP07 118 aa2.84□□□□□ -1.95
CHD1-207ENST00000511628 VDRP11473 427 aa2.84□□□□□ -1.95
CHD1-207ENST00000511628 EEF2P13639 858 aaKnown RBP2.84□□□□□ -1.95
CHD1-207ENST00000511628 DUTP33316 252 aaKnown RBP2.84□□□□□ -1.95
CHD1-207ENST00000511628 CHRNA7P36544 502 aa2.84□□□□□ -1.95
CHD1-207ENST00000511628 RPL21P46778 160 aaKnown RBP2.84□□□□□ -1.95
CHD1-207ENST00000511628 CDX1P47902 265 aaPredicted RBP2.84□□□□□ -1.95
CHD1-207ENST00000511628 SNRPD1P62314 119 aaKnown RBP2.84□□□□□ -1.95
CHD1-207ENST00000511628 GNB1P62873 340 aa2.84□□□□□ -1.95
CHD1-207ENST00000511628 FOLH1Q04609 750 aa2.84□□□□□ -1.95
CHD1-207ENST00000511628 ILF2Q12905 390 aaKnown RBP2.84□□□□□ -1.95
CHD1-207ENST00000511628 PPP2R5CQ13362 524 aa2.84□□□□□ -1.95
CHD1-207ENST00000511628 TMEM187Q14656 261 aa2.84□□□□□ -1.95
CHD1-207ENST00000511628 P2RY6Q15077 328 aa2.84□□□□□ -1.95
CHD1-207ENST00000511628 OR4A47Q6IF82 309 aa2.84□□□□□ -1.95
CHD1-207ENST00000511628 FAM53AQ6NSI3 398 aaPredicted RBP2.84□□□□□ -1.95
CHD1-207ENST00000511628 IYDQ6PHW0 289 aa2.84□□□□□ -1.95
CHD1-207ENST00000511628 ISCA2Q86U28 154 aa2.84□□□□□ -1.95
CHD1-207ENST00000511628 PIGZQ86VD9 579 aa2.84□□□□□ -1.95
CHD1-207ENST00000511628 MYPOPQ86VE0 399 aaPredicted RBP2.84□□□□□ -1.95
CHD1-207ENST00000511628 CREBRFQ8IUR6 639 aa2.84□□□□□ -1.95
CHD1-207ENST00000511628 APLFQ8IW19 511 aaPredicted RBP2.84□□□□□ -1.95
CHD1-207ENST00000511628 TUSC5Q8IXB3 177 aa2.84□□□□□ -1.95
CHD1-207ENST00000511628 CARNMT1Q8N4J0 409 aa2.84□□□□□ -1.95
CHD1-207ENST00000511628 P2RX5Q93086 422 aa2.84□□□□□ -1.95
CHD1-207ENST00000511628 ANKRD9Q96BM1 317 aaPredicted RBP2.84□□□□□ -1.95
CHD1-207ENST00000511628 PYCR2Q96C36 320 aa2.84□□□□□ -1.95
CHD1-207ENST00000511628 ZNF599Q96NL3 588 aa2.84□□□□□ -1.95
CHD1-207ENST00000511628 CACNG6Q9BXT2 260 aa2.84□□□□□ -1.95
CHD1-207ENST00000511628 OR2B2Q9GZK3 357 aa2.84□□□□□ -1.95
CHD1-207ENST00000511628 DNAI2Q9GZS0 605 aa2.84□□□□□ -1.95
CHD1-207ENST00000511628 SNX25Q9H3E2 840 aa2.84□□□□□ -1.95
CHD1-207ENST00000511628 FGF22Q9HCT0 170 aa2.84□□□□□ -1.95
CHD1-207ENST00000511628 TUFT1Q9NNX1 390 aa2.84□□□□□ -1.95
CHD1-207ENST00000511628 FGF21Q9NSA1 209 aa2.84□□□□□ -1.95
CHD1-207ENST00000511628 FAM207AQ9NSI2 230 aaPredicted RBP2.84□□□□□ -1.95
CHD1-207ENST00000511628 P4HTMQ9NXG6 502 aa2.84□□□□□ -1.95
CHD1-207ENST00000511628 SPHK1Q9NYA1 384 aa2.84□□□□□ -1.95
CHD1-207ENST00000511628 LIPT1Q9Y234 373 aa2.84□□□□□ -1.95
CHD1-207ENST00000511628 SNED1Q8TER0 1413 aa2.84□□□□□ -1.96
CHD1-207ENST00000511628 A0A0A6YYC8 382 aaPredicted RBP2.83□□□□□ -1.96
CHD1-207ENST00000511628 SMIM30A4D0T7 59 aa2.83□□□□□ -1.96
CHD1-207ENST00000511628 C2orf81A6NN90 581 aa2.83□□□□□ -1.96
CHD1-207ENST00000511628 C17orf105B2RV13 164 aa2.83□□□□□ -1.96
CHD1-207ENST00000511628 H0YIG0 161 aa2.83□□□□□ -1.96
CHD1-207ENST00000511628 I3L1I5 382 aaPredicted RBP2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms