RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 SLC6A19Q695T7 634 aa21.89■■□□□ 1.09
SNF8-209ENST00000510558 TRMT10BQ6PF06 316 aaKnown RBP21.89■■□□□ 1.09
SNF8-209ENST00000510558 ATCAYQ86WG3 371 aa21.89■■□□□ 1.09
SNF8-209ENST00000510558 PALM2Q8IXS6 379 aa21.89■■□□□ 1.09
SNF8-209ENST00000510558 MYO1HQ8N1T3 1032 aa21.89■■□□□ 1.09
SNF8-209ENST00000510558 CPT1CQ8TCG5 803 aa21.89■■□□□ 1.09
SNF8-209ENST00000510558 STT3BQ8TCJ2 826 aa21.89■■□□□ 1.09
SNF8-209ENST00000510558 RERGQ96A58 199 aaPredicted RBP21.89■■□□□ 1.09
SNF8-209ENST00000510558 LINGO1Q96FE5 620 aa21.89■■□□□ 1.09
SNF8-209ENST00000510558 SNF8Q96H20 258 aa21.89■■□□□ 1.09
SNF8-209ENST00000510558 CCDC138Q96M89 665 aa21.89■■□□□ 1.09
SNF8-209ENST00000510558 TRIM31Q9BZY9 425 aa21.89■■□□□ 1.09
SNF8-209ENST00000510558 ZNF552Q9H707 407 aaPredicted RBP21.89■■□□□ 1.09
SNF8-209ENST00000510558 SEMA3GQ9NS98 782 aa21.89■■□□□ 1.09
SNF8-209ENST00000510558 LUZP4Q9P127 313 aa21.89■■□□□ 1.09
SNF8-209ENST00000510558 ZNF282Q9UDV7 671 aaPredicted RBP21.89■■□□□ 1.09
SNF8-209ENST00000510558 SHANK1Q9Y566 2161 aa21.89■■□□□ 1.09
SNF8-209ENST00000510558 FANCGO15287 622 aa21.88■■□□□ 1.09
SNF8-209ENST00000510558 KLHL41O60662 606 aa21.88■■□□□ 1.09
SNF8-209ENST00000510558 ALOX12BO75342 701 aa21.88■■□□□ 1.09
SNF8-209ENST00000510558 ALPPP05187 535 aa21.88■■□□□ 1.09
SNF8-209ENST00000510558 FBLP22087 321 aaKnown RBP21.88■■□□□ 1.09
SNF8-209ENST00000510558 SOX8P57073 446 aa21.88■■□□□ 1.09
SNF8-209ENST00000510558 OCA2Q04671 838 aa21.88■■□□□ 1.09
SNF8-209ENST00000510558 RBBP7Q16576 425 aa21.88■■□□□ 1.09
SNF8-209ENST00000510558 PRAMEF13Q5VWM6 474 aa21.88■■□□□ 1.09
SNF8-209ENST00000510558 KIRREL2Q6UWL6 708 aa21.88■■□□□ 1.09
SNF8-209ENST00000510558 MBOAT1Q6ZNC8 495 aa21.88■■□□□ 1.09
SNF8-209ENST00000510558 EFCAB3Q8N7B9 438 aa21.88■■□□□ 1.09
SNF8-209ENST00000510558 Q8NA96 180 aa21.88■■□□□ 1.09
SNF8-209ENST00000510558 MIEF2Q96C03 454 aa21.88■■□□□ 1.09
SNF8-209ENST00000510558 MVB12AQ96EY5 273 aa21.88■■□□□ 1.09
SNF8-209ENST00000510558 CRB3Q9BUF7 120 aa21.88■■□□□ 1.09
SNF8-209ENST00000510558 PARVBQ9HBI1 364 aa21.88■■□□□ 1.09
SNF8-209ENST00000510558 RNF14Q9UBS8 474 aa21.88■■□□□ 1.09
SNF8-209ENST00000510558 CDC14AQ9UNH5 594 aa21.88■■□□□ 1.09
SNF8-209ENST00000510558 H7BY64 318 aa21.87■■□□□ 1.09
SNF8-209ENST00000510558 SLC16A5O15375 505 aa21.87■■□□□ 1.09
SNF8-209ENST00000510558 ZGLP1P0C6A0 271 aa21.87■■□□□ 1.09
SNF8-209ENST00000510558 ITGA3P26006 1051 aa21.87■■□□□ 1.09
SNF8-209ENST00000510558 KLC1Q07866 573 aa21.87■■□□□ 1.09
SNF8-209ENST00000510558 GARNL3Q5VVW2 1013 aa21.87■■□□□ 1.09
SNF8-209ENST00000510558 PLD3Q8IV08 490 aa21.87■■□□□ 1.09
SNF8-209ENST00000510558 PRSS58Q8IYP2 241 aa21.87■■□□□ 1.09
SNF8-209ENST00000510558 GPATCH11Q8N954 259 aa21.87■■□□□ 1.09
SNF8-209ENST00000510558 PNPLA2Q96AD5 504 aa21.87■■□□□ 1.09
SNF8-209ENST00000510558 PRAP1Q96NZ9 151 aa21.87■■□□□ 1.09
SNF8-209ENST00000510558 SLAMF7Q9NQ25 335 aa21.87■■□□□ 1.09
SNF8-209ENST00000510558 CORO1CQ9ULV4 474 aaPredicted RBP21.87■■□□□ 1.09
SNF8-209ENST00000510558 FLNCQ14315 2725 aa21.86■■□□□ 1.09
SNF8-209ENST00000510558 DOPEY2Q9Y3R5 2298 aa21.86■■□□□ 1.09
SNF8-209ENST00000510558 IGLV3-12A0A075B6K2 115 aa21.86■■□□□ 1.09
SNF8-209ENST00000510558 EFCAB8A8MWE9 144 aa21.86■■□□□ 1.09
SNF8-209ENST00000510558 TXNDC9O14530 226 aa21.86■■□□□ 1.09
SNF8-209ENST00000510558 TP73O15350 636 aa21.86■■□□□ 1.09
SNF8-209ENST00000510558 P2RX6O15547 441 aa21.86■■□□□ 1.09
SNF8-209ENST00000510558 PRPF4O43172 522 aaKnown RBP eCLIP21.86■■□□□ 1.09
SNF8-209ENST00000510558 IPO13O94829 963 aaKnown RBP21.86■■□□□ 1.09
SNF8-209ENST00000510558 TSPAN12O95859 305 aa21.86■■□□□ 1.09
SNF8-209ENST00000510558 HRH2P25021 359 aa21.86■■□□□ 1.09
SNF8-209ENST00000510558 PDAP1Q13442 181 aaKnown RBP21.86■■□□□ 1.09
SNF8-209ENST00000510558 PHKG1Q16816 387 aa21.86■■□□□ 1.09
SNF8-209ENST00000510558 TUBB8Q3ZCM7 444 aa21.86■■□□□ 1.09
SNF8-209ENST00000510558 HECTD2Q5U5R9 776 aa21.86■■□□□ 1.09
SNF8-209ENST00000510558 AGTRAPQ6RW13 159 aa21.86■■□□□ 1.09
SNF8-209ENST00000510558 ANKMY2Q8IV38 441 aa21.86■■□□□ 1.09
SNF8-209ENST00000510558 ARHGEF39Q8N4T4 335 aa21.86■■□□□ 1.09
SNF8-209ENST00000510558 VPS50Q96JG6 964 aa21.86■■□□□ 1.09
SNF8-209ENST00000510558 KRT12Q99456 494 aa21.86■■□□□ 1.09
SNF8-209ENST00000510558 PCBD2Q9H0N5 130 aa21.86■■□□□ 1.09
SNF8-209ENST00000510558 ATG10Q9H0Y0 220 aa21.86■■□□□ 1.09
SNF8-209ENST00000510558 TMEM184CQ9NVA4 438 aa21.86■■□□□ 1.09
SNF8-209ENST00000510558 MAP4K5Q9Y4K4 846 aa21.86■■□□□ 1.09
SNF8-209ENST00000510558 FDXRP22570 491 aa21.85■■□□□ 1.09
SNF8-209ENST00000510558 PGGT1BP53609 377 aa21.85■■□□□ 1.09
SNF8-209ENST00000510558 IL2P60568 153 aa21.85■■□□□ 1.09
SNF8-209ENST00000510558 PDIA2Q13087 525 aaKnown RBP21.85■■□□□ 1.09
SNF8-209ENST00000510558 DSG2Q14126 1118 aa21.85■■□□□ 1.09
SNF8-209ENST00000510558 FRG1Q14331 258 aaKnown RBP21.85■■□□□ 1.09
SNF8-209ENST00000510558 VWA2Q5GFL6 755 aa21.85■■□□□ 1.09
SNF8-209ENST00000510558 FAM45BPQ6NSW5 357 aa21.85■■□□□ 1.09
SNF8-209ENST00000510558 OR11G2Q8NGC1 345 aa21.85■■□□□ 1.09
SNF8-209ENST00000510558 FAM45AQ8TCE6 357 aa21.85■■□□□ 1.09
SNF8-209ENST00000510558 MMABQ96EY8 250 aaPredicted RBP21.85■■□□□ 1.09
SNF8-209ENST00000510558 TRPC4Q9UBN4 977 aa21.85■■□□□ 1.09
SNF8-209ENST00000510558 C3orf18Q9UK00 162 aa21.85■■□□□ 1.09
SNF8-209ENST00000510558 SH2B3Q9UQQ2 575 aa21.85■■□□□ 1.09
SNF8-209ENST00000510558 VWA7Q9Y334 891 aa21.85■■□□□ 1.09
SNF8-209ENST00000510558 PTPN13Q12923 2485 aa21.84■■□□□ 1.09
SNF8-209ENST00000510558 FFAR3O14843 346 aa21.84■■□□□ 1.09
SNF8-209ENST00000510558 GPR42O15529 346 aa21.84■■□□□ 1.09
SNF8-209ENST00000510558 FOXS1O43638 330 aa21.84■■□□□ 1.09
SNF8-209ENST00000510558 VPS4BO75351 444 aa21.84■■□□□ 1.09
SNF8-209ENST00000510558 RPL21P46778 160 aaKnown RBP21.84■■□□□ 1.09
SNF8-209ENST00000510558 NAE1Q13564 534 aa21.84■■□□□ 1.09
SNF8-209ENST00000510558 UBAP2LQ14157 1087 aaKnown RBP21.84■■□□□ 1.09
SNF8-209ENST00000510558 FASTKD3Q14CZ7 662 aaKnown RBP21.84■■□□□ 1.09
SNF8-209ENST00000510558 INPP5JQ15735 1006 aaPredicted RBP21.84■■□□□ 1.09
SNF8-209ENST00000510558 PRR30Q53SZ7 412 aaPredicted RBP21.84■■□□□ 1.09
SNF8-209ENST00000510558 IGFL3Q6UXB1 125 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms