RNA–Protein interactions for RNA: ENST00000509769.5

USP53-205, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 1 (best)

Gene USP53, Length 4,803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-205ENST00000509769 FASLGP48023 281 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 CAMLGP49069 296 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 POLR2JP52435 117 aaKnown RBP3.49□□□□□ -1.85
USP53-205ENST00000509769 CACNB3P54284 484 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 TAS2R20P59543 309 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 BTG1P62324 171 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 SCAPQ12770 1279 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 OVGP1Q12889 678 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 GRIK2Q13002 908 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 CAPSQ13938 189 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 SPCS2Q15005 226 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 RSU1Q15404 277 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 SLC1A5Q15758 541 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 DUOXA2Q1HG44 320 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 FUT11Q495W5 492 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 COQ5Q5HYK3 327 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 ARMC12Q5T9G4 340 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 SIGIRRQ6IA17 410 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 REEP3Q6NUK4 255 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 TAPT1Q6NXT6 567 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 CCBE1Q6UXH8 406 aaPredicted RBP3.49□□□□□ -1.85
USP53-205ENST00000509769 ERMP1Q7Z2K6 904 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 ATG9AQ7Z3C6 839 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 DCUN1D3Q8IWE4 304 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 ARMC10Q8N2F6 343 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 PNLDC1Q8NA58 520 aaKnown RBP3.49□□□□□ -1.85
USP53-205ENST00000509769 OR2T12Q8NG77 320 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 AKR7LQ8NHP1 331 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 AUTS2Q8WXX7 1259 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 KAT5Q92993 513 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 FOXN4Q96NZ1 517 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 CTRCQ99895 268 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 SEC22CQ9BRL7 303 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 HEMGNQ9BXL5 484 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 TOR3AQ9H497 397 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 RAB9BQ9NP90 201 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 NIT2Q9NQR4 276 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 SNX15Q9NRS6 342 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 TAS2R10Q9NYW0 307 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 RBAKQ9NYW8 714 aaPredicted RBP3.49□□□□□ -1.85
USP53-205ENST00000509769 RNF6Q9Y252 685 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 RBM7Q9Y580 266 aaKnown RBP3.49□□□□□ -1.85
USP53-205ENST00000509769 CD163L1Q9NR16 1453 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 GPR75-ASB3A0A0A6YYF3 556 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 PNMA6FA0A0J9YX94 578 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 A6NDN8 102 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 ANXA2P2A6NMY6 339 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 PPP1R3GB7ZBB8 358 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 KLRF2D3W0D1 207 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 OGTO15294 1046 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 ALOX15BO15296 676 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 DNPH1O43598 174 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 DCXO43602 365 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 KERAO60938 352 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 AOC2O75106 756 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 UGT2B17O75795 530 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 OTCP00480 354 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 IL1BP01584 269 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 PCCAP05165 728 aaPredicted RBP3.49□□□□□ -1.85
USP53-205ENST00000509769 LCKP06239 509 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 ANXA2P07355 339 aaKnown RBP3.49□□□□□ -1.85
USP53-205ENST00000509769 LINGO3P0C6S8 592 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 BPIP17213 487 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 ENTPD1P49961 510 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 PRKXP51817 358 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 BIDP55957 195 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 DLX5P56178 289 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 ERVK-21P61565 698 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 SLC18A2Q05940 514 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 CD47Q08722 323 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 ZNF211Q13398 564 aaPredicted RBP3.49□□□□□ -1.85
USP53-205ENST00000509769 CAMK2GQ13555 558 aaPredicted RBP3.49□□□□□ -1.85
USP53-205ENST00000509769 NCOA4Q13772 614 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 CSHL1Q14406 222 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 EIF4HQ15056 248 aaKnown RBP3.49□□□□□ -1.85
USP53-205ENST00000509769 CDK10Q15131 360 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 YIF1BQ5BJH7 314 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 KLHDC7AQ5VTJ3 777 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 RETSATQ6NUM9 610 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 TRMT10BQ6PF06 316 aaKnown RBP3.49□□□□□ -1.85
USP53-205ENST00000509769 RBMS3Q6XE24 437 aaKnown RBP3.49□□□□□ -1.85
USP53-205ENST00000509769 HACD2Q6Y1H2 254 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 CERS6Q6ZMG9 384 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 PXKQ7Z7A4 578 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 SGMS1Q86VZ5 419 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 TRAPPC5Q8IUR0 188 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 C1orf87Q8N0U7 546 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 ESX1Q8N693 406 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 SUMF2Q8NBJ7 301 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 CLRN3Q8NCR9 226 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 SCARB1Q8WTV0 552 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 ADAMTS14Q8WXS8 1223 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 TFGQ92734 400 aaPredicted RBP3.49□□□□□ -1.85
USP53-205ENST00000509769 PEX13Q92968 403 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 NACC2Q96BF6 587 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 ELP4Q96EB1 424 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 HSPBAP1Q96EW2 488 aa3.49□□□□□ -1.85
USP53-205ENST00000509769 FAM46AQ96IP4 442 aaKnown RBP3.49□□□□□ -1.85
USP53-205ENST00000509769 FAM84BQ96KN1 310 aaPredicted RBP3.49□□□□□ -1.85
USP53-205ENST00000509769 OMDQ99983 421 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms