RNA–Protein interactions for RNA: ENST00000509576.5

DDX41-210, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-210ENST00000509576 MRFAP1L1Q96HT8 127 aa12.68□□□□□ -0.38
DDX41-210ENST00000509576 CABS1Q96KC9 395 aa12.68□□□□□ -0.38
DDX41-210ENST00000509576 MACROD1Q9BQ69 325 aa12.68□□□□□ -0.38
DDX41-210ENST00000509576 RAB11FIP5Q9BXF6 653 aa12.68□□□□□ -0.38
DDX41-210ENST00000509576 TRIM8Q9BZR9 551 aa12.68□□□□□ -0.38
DDX41-210ENST00000509576 TGIF2Q9GZN2 237 aa12.68□□□□□ -0.38
DDX41-210ENST00000509576 ZNF700Q9H0M5 742 aa12.68□□□□□ -0.38
DDX41-210ENST00000509576 RBSNQ9H1K0 784 aa12.68□□□□□ -0.38
DDX41-210ENST00000509576 SPATA7Q9P0W8 599 aa12.68□□□□□ -0.38
DDX41-210ENST00000509576 GNPTGQ9UJJ9 305 aa12.68□□□□□ -0.38
DDX41-210ENST00000509576 FAM169AQ9Y6X4 670 aa12.68□□□□□ -0.38
DDX41-210ENST00000509576 EML6Q6ZMW3 1958 aa12.68□□□□□ -0.38
DDX41-210ENST00000509576 TRAV17A0A0B4J275 112 aa12.67□□□□□ -0.38
DDX41-210ENST00000509576 A0A1B0GUH1 482 aa12.67□□□□□ -0.38
DDX41-210ENST00000509576 HAT1O14929 419 aa12.67□□□□□ -0.38
DDX41-210ENST00000509576 USP1O94782 785 aa12.67□□□□□ -0.38
DDX41-210ENST00000509576 VAPBO95292 243 aa12.67□□□□□ -0.38
DDX41-210ENST00000509576 BMP10O95393 424 aa12.67□□□□□ -0.38
DDX41-210ENST00000509576 SNRPB2P08579 225 aaKnown RBP12.67□□□□□ -0.38
DDX41-210ENST00000509576 CA7P43166 264 aa12.67□□□□□ -0.38
DDX41-210ENST00000509576 PER3P56645 1201 aa12.67□□□□□ -0.38
DDX41-210ENST00000509576 OCA2Q04671 838 aa12.67□□□□□ -0.38
DDX41-210ENST00000509576 ART3Q13508 389 aa12.67□□□□□ -0.38
DDX41-210ENST00000509576 TMED2Q15363 201 aa12.67□□□□□ -0.38
DDX41-210ENST00000509576 KLHL38Q2WGJ6 581 aa12.67□□□□□ -0.38
DDX41-210ENST00000509576 IRAK1BP1Q5VVH5 260 aa12.67□□□□□ -0.38
DDX41-210ENST00000509576 FCRLBQ6BAA4 426 aa12.67□□□□□ -0.38
DDX41-210ENST00000509576 ZNF549Q6P9A3 640 aa12.67□□□□□ -0.38
DDX41-210ENST00000509576 GFRALQ6UXV0 394 aa12.67□□□□□ -0.38
DDX41-210ENST00000509576 OTOAQ7RTW8 1153 aa12.67□□□□□ -0.38
DDX41-210ENST00000509576 KIAA1328Q86T90 577 aa12.67□□□□□ -0.38
DDX41-210ENST00000509576 CHERPQ8IWX8 916 aaKnown RBP12.67□□□□□ -0.38
DDX41-210ENST00000509576 AGGF1Q8N302 714 aaeCLIP12.67□□□□□ -0.38
DDX41-210ENST00000509576 OR9A1PQ8NGU1 263 aa12.67□□□□□ -0.38
DDX41-210ENST00000509576 ZNF480Q8WV37 535 aa12.67□□□□□ -0.38
DDX41-210ENST00000509576 SKA2Q8WVK7 121 aaPredicted RBP12.67□□□□□ -0.38
DDX41-210ENST00000509576 MMABQ96EY8 250 aaPredicted RBP12.67□□□□□ -0.38
DDX41-210ENST00000509576 KIFC1Q9BW19 673 aa12.67□□□□□ -0.38
DDX41-210ENST00000509576 VN1R1Q9GZP7 353 aa12.67□□□□□ -0.38
DDX41-210ENST00000509576 TAC3Q9UHF0 121 aa12.67□□□□□ -0.38
DDX41-210ENST00000509576 SH3BGRL2Q9UJC5 107 aa12.67□□□□□ -0.38
DDX41-210ENST00000509576 ZNF148Q9UQR1 794 aa12.67□□□□□ -0.38
DDX41-210ENST00000509576 CRYL1Q9Y2S2 319 aa12.67□□□□□ -0.38
DDX41-210ENST00000509576 SETD2Q9BYW2 2564 aaPredicted RBP12.67□□□□□ -0.38
DDX41-210ENST00000509576 E7ENX8 843 aa12.66□□□□□ -0.38
DDX41-210ENST00000509576 E7EVH7 732 aa12.66□□□□□ -0.38
DDX41-210ENST00000509576 DNAJB6O75190 326 aa12.66□□□□□ -0.38
DDX41-210ENST00000509576 AVILO75366 819 aa12.66□□□□□ -0.38
DDX41-210ENST00000509576 SLC16A8O95907 504 aa12.66□□□□□ -0.38
DDX41-210ENST00000509576 KCNJ1P48048 391 aa12.66□□□□□ -0.38
DDX41-210ENST00000509576 CLCN7P51798 805 aa12.66□□□□□ -0.38
DDX41-210ENST00000509576 EMP3P54852 163 aa12.66□□□□□ -0.38
DDX41-210ENST00000509576 TAP2Q03519 686 aa12.66□□□□□ -0.38
DDX41-210ENST00000509576 ZXDCQ2QGD7 858 aaPredicted RBP12.66□□□□□ -0.38
DDX41-210ENST00000509576 SKOR2Q2VWA4 1001 aaPredicted RBP12.66□□□□□ -0.38
DDX41-210ENST00000509576 AARS2Q5JTZ9 985 aaKnown RBP12.66□□□□□ -0.38
DDX41-210ENST00000509576 ICE2Q659A1 982 aa12.66□□□□□ -0.38
DDX41-210ENST00000509576 CYHR1Q6ZMK1 362 aa12.66□□□□□ -0.38
DDX41-210ENST00000509576 NEK10Q6ZWH5 1172 aa12.66□□□□□ -0.38
DDX41-210ENST00000509576 MRGPRGQ86SM5 289 aa12.66□□□□□ -0.38
DDX41-210ENST00000509576 OR9A4Q8NGU2 314 aa12.66□□□□□ -0.38
DDX41-210ENST00000509576 SIGLEC12Q96PQ1 595 aa12.66□□□□□ -0.38
DDX41-210ENST00000509576 PANX3Q96QZ0 392 aa12.66□□□□□ -0.38
DDX41-210ENST00000509576 TTC1Q99614 292 aa12.66□□□□□ -0.38
DDX41-210ENST00000509576 TSSK1BQ9BXA7 367 aa12.66□□□□□ -0.38
DDX41-210ENST00000509576 RNF32Q9H0A6 362 aa12.66□□□□□ -0.38
DDX41-210ENST00000509576 MRPS30Q9NP92 439 aaKnown RBP12.66□□□□□ -0.38
DDX41-210ENST00000509576 EIF2B3Q9NR50 452 aaKnown RBP12.66□□□□□ -0.38
DDX41-210ENST00000509576 ABI3Q9P2A4 366 aa12.66□□□□□ -0.38
DDX41-210ENST00000509576 PCYOX1Q9UHG3 505 aa12.66□□□□□ -0.38
DDX41-210ENST00000509576 TRGV8A0A0C4DH27 118 aa12.65□□□□□ -0.38
DDX41-210ENST00000509576 DYTNA2CJ06 578 aa12.65□□□□□ -0.38
DDX41-210ENST00000509576 OR5H15A6NDH6 313 aa12.65□□□□□ -0.38
DDX41-210ENST00000509576 NDUFS3O75489 264 aa12.65□□□□□ -0.38
DDX41-210ENST00000509576 SEC24DO94855 1032 aaPredicted RBP12.65□□□□□ -0.38
DDX41-210ENST00000509576 PTMAP06454 111 aaKnown RBP12.65□□□□□ -0.38
DDX41-210ENST00000509576 ATP5DP30049 168 aa12.65□□□□□ -0.38
DDX41-210ENST00000509576 CMPK1P30085 196 aa12.65□□□□□ -0.38
DDX41-210ENST00000509576 CCNFP41002 786 aa12.65□□□□□ -0.38
DDX41-210ENST00000509576 PNLIPRP1P54315 467 aa12.65□□□□□ -0.38
DDX41-210ENST00000509576 TIAL1Q01085 375 aaKnown RBP eCLIP12.65□□□□□ -0.38
DDX41-210ENST00000509576 PRDX1Q06830 199 aaKnown RBP12.65□□□□□ -0.38
DDX41-210ENST00000509576 CUL1Q13616 776 aa12.65□□□□□ -0.38
DDX41-210ENST00000509576 INAQ16352 499 aa12.65□□□□□ -0.38
DDX41-210ENST00000509576 C3AR1Q16581 482 aa12.65□□□□□ -0.38
DDX41-210ENST00000509576 ZNF630Q2M218 657 aaPredicted RBP12.65□□□□□ -0.38
DDX41-210ENST00000509576 ANKRD22Q5VYY1 191 aa12.65□□□□□ -0.38
DDX41-210ENST00000509576 H3F3CQ6NXT2 135 aa12.65□□□□□ -0.38
DDX41-210ENST00000509576 BNC2Q6ZN30 1099 aaPredicted RBP12.65□□□□□ -0.38
DDX41-210ENST00000509576 LRRC6Q86X45 466 aa12.65□□□□□ -0.38
DDX41-210ENST00000509576 GAS2L3Q86XJ1 694 aa12.65□□□□□ -0.38
DDX41-210ENST00000509576 PDSS2Q86YH6 399 aa12.65□□□□□ -0.38
DDX41-210ENST00000509576 REXO1L1PQ8IX06 675 aa12.65□□□□□ -0.38
DDX41-210ENST00000509576 BEST3Q8N1M1 668 aa12.65□□□□□ -0.38
DDX41-210ENST00000509576 MDS2Q8NDY4 140 aa12.65□□□□□ -0.38
DDX41-210ENST00000509576 ADAMTS18Q8TE60 1221 aa12.65□□□□□ -0.38
DDX41-210ENST00000509576 SMPDL3AQ92484 453 aa12.65□□□□□ -0.38
DDX41-210ENST00000509576 MVB12AQ96EY5 273 aa12.65□□□□□ -0.38
DDX41-210ENST00000509576 LURAP1Q96LR2 239 aa12.65□□□□□ -0.38
DDX41-210ENST00000509576 BAG1Q99933 345 aaPredicted RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms