RNA–Protein interactions for RNA: ENST00000509420.5

SDHA-210, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 580 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-210ENST00000509420 IKZF3Q9UKT9 509 aa12.69□□□□□ -0.38
SDHA-210ENST00000509420 MRFAP1Q9Y605 127 aa12.69□□□□□ -0.38
SDHA-210ENST00000509420 WIPF3A6NGB9 483 aa12.68□□□□□ -0.38
SDHA-210ENST00000509420 E5RI56 91 aa12.68□□□□□ -0.38
SDHA-210ENST00000509420 E2F3O00716 465 aa12.68□□□□□ -0.38
SDHA-210ENST00000509420 CES2O00748 559 aa12.68□□□□□ -0.38
SDHA-210ENST00000509420 DNALI1O14645 258 aaPredicted RBP12.68□□□□□ -0.38
SDHA-210ENST00000509420 VPS4BO75351 444 aa12.68□□□□□ -0.38
SDHA-210ENST00000509420 KLHL18O94889 574 aa12.68□□□□□ -0.38
SDHA-210ENST00000509420 IGHEP01854 428 aa12.68□□□□□ -0.38
SDHA-210ENST00000509420 STATHP02808 62 aa12.68□□□□□ -0.38
SDHA-210ENST00000509420 CATP04040 527 aaKnown RBP12.68□□□□□ -0.38
SDHA-210ENST00000509420 EIF2S1P05198 315 aaKnown RBP12.68□□□□□ -0.38
SDHA-210ENST00000509420 CELA2AP08217 269 aa12.68□□□□□ -0.38
SDHA-210ENST00000509420 ERVK-10P10266 1014 aa12.68□□□□□ -0.38
SDHA-210ENST00000509420 SOX11P35716 441 aa12.68□□□□□ -0.38
SDHA-210ENST00000509420 DHX9Q08211 1270 aaKnown RBP12.68□□□□□ -0.38
SDHA-210ENST00000509420 PHKG1Q16816 387 aa12.68□□□□□ -0.38
SDHA-210ENST00000509420 SYT16Q17RD7 645 aa12.68□□□□□ -0.38
SDHA-210ENST00000509420 EIF2S3LQ2VIR3 472 aaKnown RBP12.68□□□□□ -0.38
SDHA-210ENST00000509420 FAM214AQ32MH5 1076 aa12.68□□□□□ -0.38
SDHA-210ENST00000509420 PRMT9Q6P2P2 845 aa12.68□□□□□ -0.38
SDHA-210ENST00000509420 KCNMB4Q86W47 210 aa12.68□□□□□ -0.38
SDHA-210ENST00000509420 ZC3H7AQ8IWR0 971 aaKnown RBP12.68□□□□□ -0.38
SDHA-210ENST00000509420 PRSS58Q8IYP2 241 aa12.68□□□□□ -0.38
SDHA-210ENST00000509420 CISD2Q8N5K1 135 aaKnown RBP12.68□□□□□ -0.38
SDHA-210ENST00000509420 CSNK1A1LQ8N752 337 aa12.68□□□□□ -0.38
SDHA-210ENST00000509420 MAGEC3Q8TD91 643 aa12.68□□□□□ -0.38
SDHA-210ENST00000509420 EEF1AKMT1Q8WVE0 214 aa12.68□□□□□ -0.38
SDHA-210ENST00000509420 EBNA1BP2Q99848 306 aaKnown RBP12.68□□□□□ -0.38
SDHA-210ENST00000509420 FAM114A2Q9NRY5 505 aa12.68□□□□□ -0.38
SDHA-210ENST00000509420 SEMA3GQ9NS98 782 aa12.68□□□□□ -0.38
SDHA-210ENST00000509420 IARS2Q9NSE4 1012 aaKnown RBP12.68□□□□□ -0.38
SDHA-210ENST00000509420 PCYOX1Q9UHG3 505 aa12.68□□□□□ -0.38
SDHA-210ENST00000509420 NXT1Q9UKK6 140 aaKnown RBP12.68□□□□□ -0.38
SDHA-210ENST00000509420 VPS4AQ9UN37 437 aa12.68□□□□□ -0.38
SDHA-210ENST00000509420 NOVA2Q9UNW9 492 aaKnown RBP12.68□□□□□ -0.38
SDHA-210ENST00000509420 PDE10AQ9Y233 779 aa12.68□□□□□ -0.38
SDHA-210ENST00000509420 VPS9D1Q9Y2B5 631 aa12.68□□□□□ -0.38
SDHA-210ENST00000509420 FBN2P35556 2912 aa12.67□□□□□ -0.38
SDHA-210ENST00000509420 CTAGE9A4FU28 777 aa12.67□□□□□ -0.38
SDHA-210ENST00000509420 SMAPO00193 183 aa12.67□□□□□ -0.38
SDHA-210ENST00000509420 EIF3FO00303 357 aaPredicted RBP12.67□□□□□ -0.38
SDHA-210ENST00000509420 AHSGP02765 367 aa12.67□□□□□ -0.38
SDHA-210ENST00000509420 ENO3P13929 434 aaPredicted RBP12.67□□□□□ -0.38
SDHA-210ENST00000509420 EZRP15311 586 aaKnown RBP12.67□□□□□ -0.38
SDHA-210ENST00000509420 PGAM1P18669 254 aa12.67□□□□□ -0.38
SDHA-210ENST00000509420 ITGA3P26006 1051 aa12.67□□□□□ -0.38
SDHA-210ENST00000509420 RPA3P35244 121 aaPredicted RBP12.67□□□□□ -0.38
SDHA-210ENST00000509420 TBPL1P62380 186 aa12.67□□□□□ -0.38
SDHA-210ENST00000509420 THOC5Q13769 683 aaKnown RBP12.67□□□□□ -0.38
SDHA-210ENST00000509420 NR6A1Q15406 480 aa12.67□□□□□ -0.38
SDHA-210ENST00000509420 MUM1Q2TAK8 710 aa12.67□□□□□ -0.38
SDHA-210ENST00000509420 TUBB8Q3ZCM7 444 aa12.67□□□□□ -0.38
SDHA-210ENST00000509420 TRMT10BQ6PF06 316 aaKnown RBP12.67□□□□□ -0.38
SDHA-210ENST00000509420 CREG2Q8IUH2 290 aa12.67□□□□□ -0.38
SDHA-210ENST00000509420 PARP9Q8IXQ6 854 aa12.67□□□□□ -0.38
SDHA-210ENST00000509420 LMNTD2Q8IXW0 634 aa12.67□□□□□ -0.38
SDHA-210ENST00000509420 RAB42Q8N4Z0 105 aa12.67□□□□□ -0.38
SDHA-210ENST00000509420 EFCAB3Q8N7B9 438 aa12.67□□□□□ -0.38
SDHA-210ENST00000509420 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.67□□□□□ -0.38
SDHA-210ENST00000509420 PPP4R1Q8TF05 950 aa12.67□□□□□ -0.38
SDHA-210ENST00000509420 TM4SF19Q96DZ7 209 aa12.67□□□□□ -0.38
SDHA-210ENST00000509420 CCDC138Q96M89 665 aa12.67□□□□□ -0.38
SDHA-210ENST00000509420 MACROD1Q9BQ69 325 aa12.67□□□□□ -0.38
SDHA-210ENST00000509420 CRB3Q9BUF7 120 aa12.67□□□□□ -0.38
SDHA-210ENST00000509420 TGIF2Q9GZN2 237 aa12.67□□□□□ -0.38
SDHA-210ENST00000509420 SLAMF7Q9NQ25 335 aa12.67□□□□□ -0.38
SDHA-210ENST00000509420 ZNF282Q9UDV7 671 aaPredicted RBP12.67□□□□□ -0.38
SDHA-210ENST00000509420 MAD1L1Q9Y6D9 718 aa12.67□□□□□ -0.38
SDHA-210ENST00000509420 SVILO95425 2214 aa12.67□□□□□ -0.38
SDHA-210ENST00000509420 SCN3AQ9NY46 2000 aa12.67□□□□□ -0.38
SDHA-210ENST00000509420 CROCCQ5TZA2 2017 aa12.66□□□□□ -0.38
SDHA-210ENST00000509420 LOC102723996A0A087X1L8 192 aa12.66□□□□□ -0.38
SDHA-210ENST00000509420 A0A0A6YYC8 382 aaPredicted RBP12.66□□□□□ -0.38
SDHA-210ENST00000509420 CTAGE15A4D2H0 777 aa12.66□□□□□ -0.38
SDHA-210ENST00000509420 IDSB3KWA1 339 aa12.66□□□□□ -0.38
SDHA-210ENST00000509420 H7BY64 318 aa12.66□□□□□ -0.38
SDHA-210ENST00000509420 I3L1I5 382 aaPredicted RBP12.66□□□□□ -0.38
SDHA-210ENST00000509420 PFDN6O15212 129 aa12.66□□□□□ -0.38
SDHA-210ENST00000509420 JRKO75564 520 aa12.66□□□□□ -0.38
SDHA-210ENST00000509420 HPP00738 406 aa12.66□□□□□ -0.38
SDHA-210ENST00000509420 PIM1P11309 404 aaPredicted RBP12.66□□□□□ -0.38
SDHA-210ENST00000509420 FBLP22087 321 aaKnown RBP12.66□□□□□ -0.38
SDHA-210ENST00000509420 HSD17B2P37059 387 aa12.66□□□□□ -0.38
SDHA-210ENST00000509420 CSNK1G2P78368 415 aa12.66□□□□□ -0.38
SDHA-210ENST00000509420 ABATP80404 500 aa12.66□□□□□ -0.38
SDHA-210ENST00000509420 MAT1AQ00266 395 aaKnown RBP12.66□□□□□ -0.38
SDHA-210ENST00000509420 PCOLCEQ15113 449 aa12.66□□□□□ -0.38
SDHA-210ENST00000509420 RBBP7Q16576 425 aa12.66□□□□□ -0.38
SDHA-210ENST00000509420 TTLL9Q3SXZ7 439 aa12.66□□□□□ -0.38
SDHA-210ENST00000509420 STEAP4Q687X5 459 aa12.66□□□□□ -0.38
SDHA-210ENST00000509420 PAQR3Q6TCH7 311 aa12.66□□□□□ -0.38
SDHA-210ENST00000509420 TMEM205Q6UW68 189 aa12.66□□□□□ -0.38
SDHA-210ENST00000509420 TMEM207Q6UWW9 146 aa12.66□□□□□ -0.38
SDHA-210ENST00000509420 UBE2R2Q712K3 238 aaPredicted RBP12.66□□□□□ -0.38
SDHA-210ENST00000509420 CTAGE6Q86UF2 777 aa12.66□□□□□ -0.38
SDHA-210ENST00000509420 PDSS2Q86YH6 399 aa12.66□□□□□ -0.38
SDHA-210ENST00000509420 IQCKQ8N0W5 287 aa12.66□□□□□ -0.38
SDHA-210ENST00000509420 MIEF2Q96C03 454 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms