RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 PSMB4P28070 264 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 GSTT1P30711 240 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 HCAR3P49019 387 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 CLCN7P51798 805 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 RHDQ02161 417 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 ZNF155Q12901 538 aaPredicted RBP2.87□□□□□ -1.95
NEDD4-208ENST00000508342 PRKD1Q15139 912 aaPredicted RBP2.87□□□□□ -1.95
NEDD4-208ENST00000508342 PTGES3Q15185 160 aaKnown RBP2.87□□□□□ -1.95
NEDD4-208ENST00000508342 XKR6Q5GH73 641 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 FBXL22Q6P050 247 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 PNCKQ6P2M8 343 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 ZNF585AQ6P3V2 769 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 MFSD7Q6UXD7 560 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 STRA8Q7Z7C7 330 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 TOR1AIP2Q8NFQ8 470 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 OR13H1Q8NG92 308 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 DNAJB14Q8TBM8 379 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 UTP15Q8TED0 518 aaKnown RBP2.87□□□□□ -1.95
NEDD4-208ENST00000508342 GTPBP3Q969Y2 492 aaKnown RBP2.87□□□□□ -1.95
NEDD4-208ENST00000508342 SGK3Q96BR1 496 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 SLC25A36Q96CQ1 311 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 APOLD1Q96LR9 279 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 MBOAT7Q96N66 472 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 TRNT1Q96Q11 434 aaKnown RBP2.87□□□□□ -1.95
NEDD4-208ENST00000508342 TRABDQ9H4I3 376 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 RIBC2Q9H4K1 309 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 NGBQ9NPG2 151 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 PRDM8Q9NQV8 689 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 DDX18Q9NVP1 670 aaKnown RBP2.87□□□□□ -1.95
NEDD4-208ENST00000508342 ADAMTS9Q9P2N4 1935 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 IQCMA0A1B0GVH7 501 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 C3orf80F5H4A9 247 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 MATN2O00339 956 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 LATO43561 262 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 CNOT3O75175 753 aaKnown RBP2.87□□□□□ -1.95
NEDD4-208ENST00000508342 SMNDC1O75940 238 aaKnown RBP eCLIP2.87□□□□□ -1.95
NEDD4-208ENST00000508342 KRT36O76013 467 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 PRAMEF1O95521 474 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 P04436 131 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 NTRK1P04629 796 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 LBPP18428 481 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 CPOXP36551 454 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 CXCR3P49682 368 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 ALDH3A2P51648 485 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 PTSQ03393 145 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 RBBP4Q09028 425 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 TARDBPQ13148 414 aaKnown RBP eCLIP2.87□□□□□ -1.95
NEDD4-208ENST00000508342 NDUFA5Q16718 116 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 LSM12Q3MHD2 195 aaKnown RBP2.87□□□□□ -1.95
NEDD4-208ENST00000508342 VPS26BQ4G0F5 336 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 SLC39A4Q6P5W5 647 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 RBMS3Q6XE24 437 aaKnown RBP2.87□□□□□ -1.95
NEDD4-208ENST00000508342 PAQR7Q86WK9 346 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 TDRPQ86YL5 185 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 DAW1Q8N136 415 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 C4orf32Q8N8J7 132 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 FAM181AQ8N9Y4 354 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 FNDC5Q8NAU1 212 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 UXS1Q8NBZ7 420 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 CATSPER1Q8NEC5 780 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 OR4L1Q8NH43 312 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 ADAMTS15Q8TE58 950 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 ZNF75CPQ92670 426 aaPredicted RBP2.87□□□□□ -1.95
NEDD4-208ENST00000508342 FGF11Q92914 225 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 ABTB1Q969K4 478 aaPredicted RBP2.87□□□□□ -1.95
NEDD4-208ENST00000508342 PHF21BQ96EK2 531 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 FAXDC2Q96IV6 333 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 TPD52L3Q96J77 140 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 NSMCE3Q96MG7 304 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 VAT1Q99536 393 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 TBL1XR1Q9BZK7 514 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 ATG10Q9H0Y0 220 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 RMI1Q9H9A7 625 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 ERVMER34-1Q9H9K5 563 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 MLXIPLQ9NP71 852 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 IL26Q9NPH9 171 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 B3GAT2Q9NPZ5 323 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 ENAMQ9NRM1 1142 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 SEMA3GQ9NS98 782 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 KLRF1Q9NZS2 232 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 CYTH4Q9UIA0 394 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 KLK13Q9UKR3 277 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 POLHQ9Y253 713 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 CADP27708 2225 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 CREBBPQ92793 2442 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 CFAP73A6NFT4 308 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 ANHXE9PGG2 379 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 KCNK1O00180 336 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 TSPAN12O95859 305 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 ANPEPP15144 967 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 COMTP21964 271 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 CD82P27701 267 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 ACADLP28330 430 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 HOXD9P28356 352 aaPredicted RBP2.87□□□□□ -1.95
NEDD4-208ENST00000508342 TNFRSF8P28908 595 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 S100A3P33764 101 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 ARL3P36405 182 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 HSD17B2P37059 387 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 ETV1P50549 477 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 AFF1P51825 1210 aaKnown RBP2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms