RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 TRA2AQ13595 282 aaKnown RBP eCLIP4.74□□□□□ -1.65
LMNB1-208ENST00000504788 SPIDRQ14159 915 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 PUM1Q14671 1186 aaKnown RBP eCLIP4.74□□□□□ -1.658e-9■□□□□ 9.1
LMNB1-208ENST00000504788 KCNAB1Q14722 419 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 ADPRMQ3LIE5 342 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 UGT3A2Q3SY77 523 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 GGTA1PQ4G0N0 100 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 PRAMEF13Q5VWM6 474 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 ATG9BQ674R7 924 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 LETMD1Q6P1Q0 360 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 TTC23LQ6PF05 361 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 ZNF517Q6ZMY9 492 aaPredicted RBP4.74□□□□□ -1.65
LMNB1-208ENST00000504788 RBM44Q6ZP01 1051 aaKnown RBP4.74□□□□□ -1.65
LMNB1-208ENST00000504788 FAM92BQ6ZTR7 304 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 FRMD7Q6ZUT3 714 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 GOLGA7Q7Z5G4 137 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 TMPRSS12Q86WS5 348 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 KMT5CQ86Y97 462 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 LAS2Q8IYD9 372 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 SYTL1Q8IYJ3 562 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 OR4N4Q8N0Y3 316 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 FBXO39Q8N4B4 442 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 CHCHD4Q8N4Q1 142 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 SLC38A9Q8NBW4 561 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 WDR20Q8TBZ3 569 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 MDM1Q8TC05 714 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 CREB3L4Q8TEY5 395 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 SLC5A11Q8WWX8 675 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 ATL1Q8WXF7 558 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 SLC22A18Q96BI1 424 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 PHF21BQ96EK2 531 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 HIST1H2AHQ96KK5 128 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 PRAP1Q96NZ9 151 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 TGM7Q96PF1 710 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 SMC6Q96SB8 1091 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 MIPEPQ99797 713 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 HIST1H2AJQ99878 128 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 DPYSL5Q9BPU6 564 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 H2AFJQ9BTM1 129 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 ZNF717Q9BY31 904 aaPredicted RBP4.74□□□□□ -1.65
LMNB1-208ENST00000504788 STN1Q9H668 368 aaKnown RBP4.74□□□□□ -1.65
LMNB1-208ENST00000504788 CNOT10Q9H9A5 744 aaKnown RBP4.74□□□□□ -1.65
LMNB1-208ENST00000504788 APMAPQ9HDC9 416 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 ASCL3Q9NQ33 180 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 GEMIN8Q9NWZ8 242 aaKnown RBP4.74□□□□□ -1.65
LMNB1-208ENST00000504788 GPRC5BQ9NZH0 403 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 LNPEPQ9UIQ6 1025 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 CLCA2Q9UQC9 943 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 CCL27Q9Y4X3 112 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 PCDHB11Q9Y5F2 797 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 NUP210LQ5VU65 1888 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 IGF2RP11717 2491 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 APC2O95996 2303 aa4.73□□□□□ -1.65
LMNB1-208ENST00000504788 FITM1A5D6W6 292 aa4.73□□□□□ -1.65
LMNB1-208ENST00000504788 FAM149AA5PLN7 773 aa4.73□□□□□ -1.65
LMNB1-208ENST00000504788 CDRT15L2A8MXV6 281 aa4.73□□□□□ -1.65
LMNB1-208ENST00000504788 ISM1B1AKI9 464 aa4.73□□□□□ -1.65
LMNB1-208ENST00000504788 HMGB1P1B2RPK0 211 aaPredicted RBP4.73□□□□□ -1.65
LMNB1-208ENST00000504788 SUPT3HB4E1H0 165 aa4.73□□□□□ -1.65
LMNB1-208ENST00000504788 C9orf172C9J069 976 aa4.73□□□□□ -1.65
LMNB1-208ENST00000504788 HAT1O14929 419 aa4.73□□□□□ -1.65
LMNB1-208ENST00000504788 BIRC5O15392 142 aa4.73□□□□□ -1.65
LMNB1-208ENST00000504788 ITM2AO43736 263 aa4.73□□□□□ -1.65
LMNB1-208ENST00000504788 UGDHO60701 494 aa4.73□□□□□ -1.65
LMNB1-208ENST00000504788 TRIM13O60858 407 aa4.73□□□□□ -1.65
LMNB1-208ENST00000504788 CSO75390 466 aaKnown RBP4.73□□□□□ -1.65
LMNB1-208ENST00000504788 SUPT3HO75486 399 aa4.73□□□□□ -1.65
LMNB1-208ENST00000504788 DXOO77932 396 aaKnown RBP4.73□□□□□ -1.65
LMNB1-208ENST00000504788 KLHL18O94889 574 aa4.73□□□□□ -1.65
LMNB1-208ENST00000504788 WDR47O94967 919 aa4.73□□□□□ -1.65
LMNB1-208ENST00000504788 ZWINTO95229 277 aa4.73□□□□□ -1.65
LMNB1-208ENST00000504788 CHRNGP07510 517 aa4.73□□□□□ -1.65
LMNB1-208ENST00000504788 ADRB1P08588 477 aa4.73□□□□□ -1.65
LMNB1-208ENST00000504788 EBLN1P0CF75 366 aa4.73□□□□□ -1.65
LMNB1-208ENST00000504788 SMIM10L1P0DMW3 83 aa4.73□□□□□ -1.65
LMNB1-208ENST00000504788 CDH1P12830 882 aa4.73□□□□□ -1.65
LMNB1-208ENST00000504788 HGFP14210 728 aa4.73□□□□□ -1.65
LMNB1-208ENST00000504788 AMD1P17707 334 aa4.73□□□□□ -1.65
LMNB1-208ENST00000504788 GNAZP19086 355 aa4.73□□□□□ -1.65
LMNB1-208ENST00000504788 ITIH1P19827 911 aa4.73□□□□□ -1.65
LMNB1-208ENST00000504788 SDHBP21912 280 aa4.73□□□□□ -1.65
LMNB1-208ENST00000504788 VARSP26640 1264 aaKnown RBP4.73□□□□□ -1.65
LMNB1-208ENST00000504788 EEF1DP29692 281 aaKnown RBP4.73□□□□□ -1.65
LMNB1-208ENST00000504788 BCL6P41182 706 aa4.73□□□□□ -1.65
LMNB1-208ENST00000504788 SCTRP47872 440 aa4.73□□□□□ -1.65
LMNB1-208ENST00000504788 NAGLUP54802 743 aa4.73□□□□□ -1.65
LMNB1-208ENST00000504788 HSD11B2P80365 405 aa4.73□□□□□ -1.65
LMNB1-208ENST00000504788 REEP5Q00765 189 aa4.73□□□□□ -1.65
LMNB1-208ENST00000504788 MC2RQ01718 297 aa4.73□□□□□ -1.65
LMNB1-208ENST00000504788 MEF2AQ02078 507 aaPredicted RBP4.73□□□□□ -1.65
LMNB1-208ENST00000504788 KCNC4Q03721 635 aa4.73□□□□□ -1.65
LMNB1-208ENST00000504788 CLCQ05315 142 aa4.73□□□□□ -1.65
LMNB1-208ENST00000504788 TARDBPQ13148 414 aaKnown RBP eCLIP4.73□□□□□ -1.652e-7■■■□□ 18.4
LMNB1-208ENST00000504788 GTF2H2Q13888 395 aa4.73□□□□□ -1.65
LMNB1-208ENST00000504788 DOC2AQ14183 400 aa4.73□□□□□ -1.65
LMNB1-208ENST00000504788 RTP5Q14D33 572 aa4.73□□□□□ -1.65
LMNB1-208ENST00000504788 SF1Q15637 639 aaKnown RBP4.73□□□□□ -1.65
LMNB1-208ENST00000504788 PDK4Q16654 411 aa4.73□□□□□ -1.65
LMNB1-208ENST00000504788 PRTGQ2VWP7 1150 aa4.73□□□□□ -1.65
LMNB1-208ENST00000504788 CACHD1Q5VU97 1274 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms