RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 DTWD1Q8N5C7 304 aa20.59■□□□□ 0.89
UBE2D3-216ENST00000503742 PAPD5Q8NDF8 572 aaKnown RBP20.59■□□□□ 0.89
UBE2D3-216ENST00000503742 CCDC115Q96NT0 180 aa20.59■□□□□ 0.89
UBE2D3-216ENST00000503742 SH3GL1Q99961 368 aa20.59■□□□□ 0.89
UBE2D3-216ENST00000503742 MENTQ9BUN1 341 aa20.59■□□□□ 0.89
UBE2D3-216ENST00000503742 PREBQ9HCU5 417 aa20.59■□□□□ 0.89
UBE2D3-216ENST00000503742 SLC17A4Q9Y2C5 497 aa20.59■□□□□ 0.89
UBE2D3-216ENST00000503742 AP3M1Q9Y2T2 418 aa20.59■□□□□ 0.89
UBE2D3-216ENST00000503742 PIAS3Q9Y6X2 628 aa20.59■□□□□ 0.89
UBE2D3-216ENST00000503742 KANSL1LA0AUZ9 987 aa20.58■□□□□ 0.89
UBE2D3-216ENST00000503742 BMP2P12643 396 aa20.58■□□□□ 0.89
UBE2D3-216ENST00000503742 DRD1P21728 446 aa20.58■□□□□ 0.89
UBE2D3-216ENST00000503742 MRPS35P82673 323 aaKnown RBP20.58■□□□□ 0.89
UBE2D3-216ENST00000503742 LAPTM5Q13571 262 aa20.58■□□□□ 0.89
UBE2D3-216ENST00000503742 CYP51A1Q16850 503 aa20.58■□□□□ 0.89
UBE2D3-216ENST00000503742 PGS1Q32NB8 556 aa20.58■□□□□ 0.89
UBE2D3-216ENST00000503742 SPIN4Q56A73 249 aa20.58■□□□□ 0.89
UBE2D3-216ENST00000503742 MTX3Q5HYI7 312 aa20.58■□□□□ 0.89
UBE2D3-216ENST00000503742 PRAMEF14Q5SWL7 426 aa20.58■□□□□ 0.89
UBE2D3-216ENST00000503742 PRAMEF13Q5VWM6 474 aa20.58■□□□□ 0.89
UBE2D3-216ENST00000503742 GLYATQ6IB77 296 aa20.58■□□□□ 0.89
UBE2D3-216ENST00000503742 DNAJC14Q6Y2X3 702 aaPredicted RBP20.58■□□□□ 0.89
UBE2D3-216ENST00000503742 C1orf52Q8N6N3 182 aaKnown RBP20.58■□□□□ 0.89
UBE2D3-216ENST00000503742 GFM2Q969S9 779 aaKnown RBP20.58■□□□□ 0.89
UBE2D3-216ENST00000503742 TIMM29Q9BSF4 260 aa20.58■□□□□ 0.89
UBE2D3-216ENST00000503742 SPNS1Q9H2V7 528 aa20.58■□□□□ 0.89
UBE2D3-216ENST00000503742 SIRT5Q9NXA8 310 aa20.58■□□□□ 0.89
UBE2D3-216ENST00000503742 AURKCQ9UQB9 309 aa20.58■□□□□ 0.89
UBE2D3-216ENST00000503742 TSC22D4Q9Y3Q8 395 aa20.58■□□□□ 0.89
UBE2D3-216ENST00000503742 MYO1DO94832 1006 aa20.57■□□□□ 0.88
UBE2D3-216ENST00000503742 CEACAM5P06731 702 aa20.57■□□□□ 0.88
UBE2D3-216ENST00000503742 GGT1P19440 569 aa20.57■□□□□ 0.88
UBE2D3-216ENST00000503742 KIR3DL1P43629 444 aa20.57■□□□□ 0.88
UBE2D3-216ENST00000503742 SRSF11Q05519 484 aaKnown RBP20.57■□□□□ 0.88
UBE2D3-216ENST00000503742 SF1Q15637 639 aaKnown RBP20.57■□□□□ 0.88
UBE2D3-216ENST00000503742 CYP2A13Q16696 494 aa20.57■□□□□ 0.88
UBE2D3-216ENST00000503742 AMIGO2Q86SJ2 522 aa20.57■□□□□ 0.88
UBE2D3-216ENST00000503742 ANKFN1Q8N957 763 aa20.57■□□□□ 0.88
UBE2D3-216ENST00000503742 TRPV3Q8NET8 790 aa20.57■□□□□ 0.88
UBE2D3-216ENST00000503742 CPPED1Q9BRF8 314 aaPredicted RBP20.57■□□□□ 0.88
UBE2D3-216ENST00000503742 HAUS8Q9BT25 410 aa20.57■□□□□ 0.88
UBE2D3-216ENST00000503742 INPP5KQ9BT40 448 aa20.57■□□□□ 0.88
UBE2D3-216ENST00000503742 THUMPD3Q9BV44 507 aaKnown RBP20.57■□□□□ 0.88
UBE2D3-216ENST00000503742 C1QTNF7Q9BXJ2 289 aa20.57■□□□□ 0.88
UBE2D3-216ENST00000503742 C8orf33Q9H7E9 229 aaPredicted RBP20.57■□□□□ 0.88
UBE2D3-216ENST00000503742 RMI1Q9H9A7 625 aa20.57■□□□□ 0.88
UBE2D3-216ENST00000503742 FZD4Q9ULV1 537 aa20.57■□□□□ 0.88
UBE2D3-216ENST00000503742 TDRKHQ9Y2W6 561 aaKnown RBP20.57■□□□□ 0.88
UBE2D3-216ENST00000503742 CFAP20Q9Y6A4 193 aaKnown RBP20.57■□□□□ 0.88
UBE2D3-216ENST00000503742 PRR19A6NJB7 356 aa20.57■□□□□ 0.88
UBE2D3-216ENST00000503742 AKAP10O43572 662 aa20.57■□□□□ 0.88
UBE2D3-216ENST00000503742 SCN2BO60939 215 aa20.57■□□□□ 0.88
UBE2D3-216ENST00000503742 B3GALT4O96024 378 aa20.57■□□□□ 0.88
UBE2D3-216ENST00000503742 SOX11P35716 441 aa20.57■□□□□ 0.88
UBE2D3-216ENST00000503742 HSD17B2P37059 387 aa20.57■□□□□ 0.88
UBE2D3-216ENST00000503742 WNT3P56703 355 aa20.57■□□□□ 0.88
UBE2D3-216ENST00000503742 MRPS21P82921 87 aaKnown RBP20.57■□□□□ 0.88
UBE2D3-216ENST00000503742 FOLH1Q04609 750 aa20.57■□□□□ 0.88
UBE2D3-216ENST00000503742 HIST2H2ACQ16777 129 aaPredicted RBP20.57■□□□□ 0.88
UBE2D3-216ENST00000503742 HIST2H2AA3Q6FI13 130 aa20.57■□□□□ 0.88
UBE2D3-216ENST00000503742 OR4F3Q6IEY1 312 aa20.57■□□□□ 0.88
UBE2D3-216ENST00000503742 GALNT18Q6P9A2 607 aa20.57■□□□□ 0.88
UBE2D3-216ENST00000503742 CHST15Q7LFX5 561 aaPredicted RBP20.57■□□□□ 0.88
UBE2D3-216ENST00000503742 ZNF548Q8NEK5 533 aaPredicted RBP20.57■□□□□ 0.88
UBE2D3-216ENST00000503742 OR8J2Q8NGG1 315 aa20.57■□□□□ 0.88
UBE2D3-216ENST00000503742 OR10A6Q8NH74 314 aa20.57■□□□□ 0.88
UBE2D3-216ENST00000503742 EME1Q96AY2 570 aa20.57■□□□□ 0.88
UBE2D3-216ENST00000503742 PPWD1Q96BP3 646 aaKnown RBP20.57■□□□□ 0.88
UBE2D3-216ENST00000503742 BIRC7Q96CA5 298 aa20.57■□□□□ 0.88
UBE2D3-216ENST00000503742 DMRT3Q9NQL9 472 aa20.57■□□□□ 0.88
UBE2D3-216ENST00000503742 AGPAT4Q9NRZ5 378 aa20.57■□□□□ 0.88
UBE2D3-216ENST00000503742 TBC1D3DA0A087WVF3 549 aa20.56■□□□□ 0.88
UBE2D3-216ENST00000503742 TBC1D3IA0A087WXS9 549 aa20.56■□□□□ 0.88
UBE2D3-216ENST00000503742 TBC1D3EA0A087X179 549 aa20.56■□□□□ 0.88
UBE2D3-216ENST00000503742 TBC1D3KA0A087X1G2 549 aa20.56■□□□□ 0.88
UBE2D3-216ENST00000503742 TBC1D3FA6NER0 549 aaPredicted RBP20.56■□□□□ 0.88
UBE2D3-216ENST00000503742 EIF4E1BA6NMX2 242 aaKnown RBP20.56■□□□□ 0.88
UBE2D3-216ENST00000503742 TBC1D3LB9A6J9 549 aa20.56■□□□□ 0.88
UBE2D3-216ENST00000503742 H0YJX3 145 aa20.56■□□□□ 0.88
UBE2D3-216ENST00000503742 DENRO43583 198 aaKnown RBP20.56■□□□□ 0.88
UBE2D3-216ENST00000503742 SLC35G4P0C7Q5 338 aa20.56■□□□□ 0.88
UBE2D3-216ENST00000503742 TBC1D3HP0C7X1 549 aa20.56■□□□□ 0.88
UBE2D3-216ENST00000503742 ACP5P13686 325 aa20.56■□□□□ 0.88
UBE2D3-216ENST00000503742 RPL10P27635 214 aaKnown RBP20.56■□□□□ 0.88
UBE2D3-216ENST00000503742 CLCNKAP51800 687 aa20.56■□□□□ 0.88
UBE2D3-216ENST00000503742 GRSF1Q12849 480 aaKnown RBP eCLIP20.56■□□□□ 0.88
UBE2D3-216ENST00000503742 MED21Q13503 144 aa20.56■□□□□ 0.88
UBE2D3-216ENST00000503742 THEMIS2Q5TEJ8 643 aa20.56■□□□□ 0.88
UBE2D3-216ENST00000503742 TBC1D3GQ6DHY5 549 aa20.56■□□□□ 0.88
UBE2D3-216ENST00000503742 TBC1D3CQ6IPX1 549 aa20.56■□□□□ 0.88
UBE2D3-216ENST00000503742 ANKRD46Q86W74 232 aa20.56■□□□□ 0.88
UBE2D3-216ENST00000503742 FAM129CQ86XR2 697 aa20.56■□□□□ 0.88
UBE2D3-216ENST00000503742 TBC1D21Q8IYX1 336 aa20.56■□□□□ 0.88
UBE2D3-216ENST00000503742 TBC1D3Q8IZP1 549 aaPredicted RBP20.56■□□□□ 0.88
UBE2D3-216ENST00000503742 OR2T12Q8NG77 320 aa20.56■□□□□ 0.88
UBE2D3-216ENST00000503742 OR7A2PQ8NGA2 310 aa20.56■□□□□ 0.88
UBE2D3-216ENST00000503742 ASB12Q8WXK4 309 aa20.56■□□□□ 0.88
UBE2D3-216ENST00000503742 SIPA1Q96FS4 1042 aa20.56■□□□□ 0.88
UBE2D3-216ENST00000503742 NSMCE2Q96MF7 247 aa20.56■□□□□ 0.88
UBE2D3-216ENST00000503742 REXO4Q9GZR2 422 aaKnown RBP20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms