RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 NGFP01138 241 aa2.2□□□□□ -2.06
HMGB1P35-201ENST00000503360 ZFYP08048 801 aaPredicted RBP2.2□□□□□ -2.06
HMGB1P35-201ENST00000503360 VIMP08670 466 aaKnown RBP2.2□□□□□ -2.06
HMGB1P35-201ENST00000503360 FAM86B2P0C5J1 330 aa2.2□□□□□ -2.06
HMGB1P35-201ENST00000503360 FAM58BPP0C7Q3 252 aa2.2□□□□□ -2.06
HMGB1P35-201ENST00000503360 IGHV4-31P0DP07 118 aa2.2□□□□□ -2.06
HMGB1P35-201ENST00000503360 MYL6BP14649 208 aa2.2□□□□□ -2.06
HMGB1P35-201ENST00000503360 ADRA2CP18825 462 aa2.2□□□□□ -2.06
HMGB1P35-201ENST00000503360 IL10P22301 178 aa2.2□□□□□ -2.06
HMGB1P35-201ENST00000503360 CA6P23280 308 aa2.2□□□□□ -2.06
HMGB1P35-201ENST00000503360 ITGA3P26006 1051 aa2.2□□□□□ -2.06
HMGB1P35-201ENST00000503360 CD27P26842 260 aa2.2□□□□□ -2.06
HMGB1P35-201ENST00000503360 MAPK3P27361 379 aaPredicted RBP2.2□□□□□ -2.06
HMGB1P35-201ENST00000503360 CSTF2P33240 577 aaKnown RBP eCLIP2.2□□□□□ -2.06
HMGB1P35-201ENST00000503360 TIMP3P35625 211 aa2.2□□□□□ -2.06
HMGB1P35-201ENST00000503360 WNT5AP41221 380 aa2.2□□□□□ -2.06
HMGB1P35-201ENST00000503360 RPL21P46778 160 aaKnown RBP2.2□□□□□ -2.06
HMGB1P35-201ENST00000503360 NAGLUP54802 743 aa2.2□□□□□ -2.06
HMGB1P35-201ENST00000503360 MAZP56270 477 aaKnown RBP2.2□□□□□ -2.06
HMGB1P35-201ENST00000503360 MTCP1P56278 107 aa2.2□□□□□ -2.06
HMGB1P35-201ENST00000503360 HSD17B7P56937 341 aa2.2□□□□□ -2.06
HMGB1P35-201ENST00000503360 GSDMDP57764 484 aa2.2□□□□□ -2.06
HMGB1P35-201ENST00000503360 IL1RL1Q01638 556 aa2.2□□□□□ -2.06
HMGB1P35-201ENST00000503360 CDR2Q01850 454 aa2.2□□□□□ -2.06
HMGB1P35-201ENST00000503360 GCNT1Q02742 428 aa2.2□□□□□ -2.06
HMGB1P35-201ENST00000503360 KLC1Q07866 573 aa2.2□□□□□ -2.06
HMGB1P35-201ENST00000503360 PTK6Q13882 451 aa2.2□□□□□ -2.06
HMGB1P35-201ENST00000503360 TUBB2AQ13885 445 aa2.2□□□□□ -2.06
HMGB1P35-201ENST00000503360 NFE2L1Q14494 772 aa2.2□□□□□ -2.06
HMGB1P35-201ENST00000503360 PPA1Q15181 289 aa2.2□□□□□ -2.06
HMGB1P35-201ENST00000503360 NONOQ15233 471 aaKnown RBP eCLIP2.2□□□□□ -2.06
HMGB1P35-201ENST00000503360 UGCGQ16739 394 aa2.2□□□□□ -2.06
HMGB1P35-201ENST00000503360 PHKG1Q16816 387 aa2.2□□□□□ -2.06
HMGB1P35-201ENST00000503360 LBHQ53QV2 105 aaPredicted RBP2.2□□□□□ -2.06
HMGB1P35-201ENST00000503360 XKR3Q5GH77 459 aa2.2□□□□□ -2.06
HMGB1P35-201ENST00000503360 LRRC73Q5JTD7 316 aa2.2□□□□□ -2.06
HMGB1P35-201ENST00000503360 GLRA4Q5JXX5 417 aa2.2□□□□□ -2.06
HMGB1P35-201ENST00000503360 SHEQ5VZ18 495 aa2.2□□□□□ -2.06
HMGB1P35-201ENST00000503360 FAM91A1Q658Y4 838 aa2.2□□□□□ -2.06
HMGB1P35-201ENST00000503360 UNC5DQ6UXZ4 953 aa2.2□□□□□ -2.06
HMGB1P35-201ENST00000503360 MSANTD1Q6ZTZ1 278 aa2.2□□□□□ -2.06
HMGB1P35-201ENST00000503360 MCM10Q7L590 875 aa2.2□□□□□ -2.06
HMGB1P35-201ENST00000503360 SLC16A9Q7RTY1 509 aa2.2□□□□□ -2.06
HMGB1P35-201ENST00000503360 RPAINQ86UA6 219 aa2.2□□□□□ -2.06
HMGB1P35-201ENST00000503360 SIX6OS1Q8N1H7 587 aa2.2□□□□□ -2.06
HMGB1P35-201ENST00000503360 RASGEF1AQ8N9B8 481 aa2.2□□□□□ -2.06
HMGB1P35-201ENST00000503360 OR52N5Q8NH56 324 aa2.2□□□□□ -2.06
HMGB1P35-201ENST00000503360 OCC1Q8TAD7 63 aa2.2□□□□□ -2.06
HMGB1P35-201ENST00000503360 FIBINQ8TAL6 211 aa2.2□□□□□ -2.06
HMGB1P35-201ENST00000503360 HEXDCQ8WVB3 486 aa2.2□□□□□ -2.06
HMGB1P35-201ENST00000503360 N4BP2L2Q92802 583 aaPredicted RBP2.2□□□□□ -2.06
HMGB1P35-201ENST00000503360 ST6GALNAC6Q969X2 333 aa2.2□□□□□ -2.06
HMGB1P35-201ENST00000503360 AK8Q96MA6 479 aa2.2□□□□□ -2.06
HMGB1P35-201ENST00000503360 TSGA13Q96PP4 275 aa2.2□□□□□ -2.06
HMGB1P35-201ENST00000503360 CCDC3Q9BQI4 270 aa2.2□□□□□ -2.06
HMGB1P35-201ENST00000503360 TUBB2BQ9BVA1 445 aa2.2□□□□□ -2.06
HMGB1P35-201ENST00000503360 PANK2Q9BZ23 570 aa2.2□□□□□ -2.06
HMGB1P35-201ENST00000503360 OR2B2Q9GZK3 357 aa2.2□□□□□ -2.06
HMGB1P35-201ENST00000503360 GFRA4Q9GZZ7 299 aa2.2□□□□□ -2.06
HMGB1P35-201ENST00000503360 ZMYND12Q9H0C1 365 aa2.2□□□□□ -2.06
HMGB1P35-201ENST00000503360 TNMDQ9H2S6 317 aa2.2□□□□□ -2.06
HMGB1P35-201ENST00000503360 SNX25Q9H3E2 840 aa2.2□□□□□ -2.06
HMGB1P35-201ENST00000503360 IL1RAPL2Q9NP60 686 aa2.2□□□□□ -2.06
HMGB1P35-201ENST00000503360 MID1IP1Q9NPA3 183 aa2.2□□□□□ -2.06
HMGB1P35-201ENST00000503360 SIX2Q9NPC8 291 aa2.2□□□□□ -2.06
HMGB1P35-201ENST00000503360 GSN-AS1Q9NRJ2 163 aa2.2□□□□□ -2.06
HMGB1P35-201ENST00000503360 FAM207AQ9NSI2 230 aaPredicted RBP2.2□□□□□ -2.06
HMGB1P35-201ENST00000503360 P4HTMQ9NXG6 502 aa2.2□□□□□ -2.06
HMGB1P35-201ENST00000503360 FLRT3Q9NZU0 649 aa2.2□□□□□ -2.06
HMGB1P35-201ENST00000503360 ZNF624Q9P2J8 865 aaPredicted RBP2.2□□□□□ -2.06
HMGB1P35-201ENST00000503360 DNAJB9Q9UBS3 223 aa2.2□□□□□ -2.06
HMGB1P35-201ENST00000503360 HOOK1Q9UJC3 728 aaKnown RBP2.2□□□□□ -2.06
HMGB1P35-201ENST00000503360 KCNJ14Q9UNX9 436 aa2.2□□□□□ -2.06
HMGB1P35-201ENST00000503360 LIPT1Q9Y234 373 aa2.2□□□□□ -2.06
HMGB1P35-201ENST00000503360 IGSF1Q8N6C5 1336 aa2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 ABCC9O60706 1549 aa2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 SYNJ2BP-COX16A0A087WUM0 186 aa2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 TRAV24A0A0B4J272 114 aa2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 IGKV3D-20A0A0C4DH25 116 aa2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 IGHV4-61A0A0C4DH41 118 aa2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 LRRD1A4D1F6 860 aa2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 KRT87PA6NCN2 255 aa2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 FAM72CH0Y354 149 aa2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 BLOC1S5-TXNDC5H3BN57 136 aa2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 TXNL1O43396 289 aa2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 PCDH7O60245 1069 aa2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 SEC22BO75396 215 aa2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 LUC7L3O95232 432 aaKnown RBP2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 SIX3O95343 332 aaPredicted RBP2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 GUCA1CO95843 209 aa2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 IGHV4-59P01825 116 aa2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 EDN1P05305 212 aa2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 CD48P09326 243 aa2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 SUPT20HL2P0C7V6 817 aa2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 ERVK-10P10266 1014 aa2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 PCP11498 1178 aaKnown RBP2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 DARSP14868 501 aaKnown RBP2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 GAP43P17677 238 aa2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 CASTP20810 708 aaKnown RBP2.19□□□□□ -2.06
HMGB1P35-201ENST00000503360 PEX19P40855 299 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms