RNA–Protein interactions for RNA: ENST00000503114.1

TRIM41-203, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 1,904 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-203ENST00000503114 PCDHGB1Q9Y5G3 927 aa18.45■□□□□ 0.54
TRIM41-203ENST00000503114 HSPE1-MOB4S4R3N1 261 aa18.45■□□□□ 0.54
TRIM41-203ENST00000503114 TMEM202A6NGA9 273 aa18.44■□□□□ 0.54
TRIM41-203ENST00000503114 UPK3BL1B0FP48 263 aa18.44■□□□□ 0.54
TRIM41-203ENST00000503114 UPK3BL2E5RIL1 263 aa18.44■□□□□ 0.54
TRIM41-203ENST00000503114 MITFO75030 526 aaPredicted RBP18.44■□□□□ 0.54
TRIM41-203ENST00000503114 KDELR2P33947 212 aa18.44■□□□□ 0.54
TRIM41-203ENST00000503114 ETV3P41162 512 aa18.44■□□□□ 0.54
TRIM41-203ENST00000503114 HNF4AP41235 474 aa18.44■□□□□ 0.54
TRIM41-203ENST00000503114 RECQLP46063 649 aaPredicted RBP18.44■□□□□ 0.54
TRIM41-203ENST00000503114 MAPK10P53779 464 aa18.44■□□□□ 0.54
TRIM41-203ENST00000503114 KEAP1Q14145 624 aa18.44■□□□□ 0.54
TRIM41-203ENST00000503114 CAPN13Q6MZZ7 669 aaPredicted RBP18.44■□□□□ 0.54
TRIM41-203ENST00000503114 Q6ZNX1 250 aa18.44■□□□□ 0.54
TRIM41-203ENST00000503114 CBLL1Q75N03 491 aa18.44■□□□□ 0.54
TRIM41-203ENST00000503114 KIAA0907Q7Z7F0 614 aaPredicted RBP18.44■□□□□ 0.54
TRIM41-203ENST00000503114 SETD9Q8NE22 299 aa18.44■□□□□ 0.54
TRIM41-203ENST00000503114 ATL1Q8WXF7 558 aa18.44■□□□□ 0.54
TRIM41-203ENST00000503114 IRF7Q92985 503 aa18.44■□□□□ 0.54
TRIM41-203ENST00000503114 GLMNQ92990 594 aa18.44■□□□□ 0.54
TRIM41-203ENST00000503114 CCDC138Q96M89 665 aa18.44■□□□□ 0.54
TRIM41-203ENST00000503114 NODALQ96S42 347 aa18.44■□□□□ 0.54
TRIM41-203ENST00000503114 PCDH12Q9NPG4 1184 aa18.44■□□□□ 0.54
TRIM41-203ENST00000503114 STOX2Q9P2F5 926 aaPredicted RBP18.44■□□□□ 0.54
TRIM41-203ENST00000503114 SNX5Q9Y5X3 404 aa18.44■□□□□ 0.54
TRIM41-203ENST00000503114 PCM1Q15154 2024 aa18.44■□□□□ 0.54
TRIM41-203ENST00000503114 OR2AG2A6NM03 316 aa18.43■□□□□ 0.54
TRIM41-203ENST00000503114 PFDN1O60925 122 aa18.43■□□□□ 0.54
TRIM41-203ENST00000503114 BCL10O95999 233 aa18.43■□□□□ 0.54
TRIM41-203ENST00000503114 TIMP2P16035 220 aa18.43■□□□□ 0.54
TRIM41-203ENST00000503114 FPR1P21462 350 aa18.43■□□□□ 0.54
TRIM41-203ENST00000503114 DNAJA1P31689 397 aaKnown RBP18.43■□□□□ 0.54
TRIM41-203ENST00000503114 DAPP51397 102 aa18.43■□□□□ 0.54
TRIM41-203ENST00000503114 PIGFQ07326 219 aa18.43■□□□□ 0.54
TRIM41-203ENST00000503114 C1orf53Q5VUE5 145 aa18.43■□□□□ 0.54
TRIM41-203ENST00000503114 TMEM215Q68D42 235 aa18.43■□□□□ 0.54
TRIM41-203ENST00000503114 AGTRAPQ6RW13 159 aa18.43■□□□□ 0.54
TRIM41-203ENST00000503114 XKR5Q6UX68 686 aa18.43■□□□□ 0.54
TRIM41-203ENST00000503114 SLC16A12Q6ZSM3 486 aa18.43■□□□□ 0.54
TRIM41-203ENST00000503114 EIF3MQ7L2H7 374 aaKnown RBP18.43■□□□□ 0.54
TRIM41-203ENST00000503114 CAMKMTQ7Z624 323 aa18.43■□□□□ 0.54
TRIM41-203ENST00000503114 CLECL1Q8IZS7 167 aa18.43■□□□□ 0.54
TRIM41-203ENST00000503114 MTERF1Q99551 399 aaKnown RBP18.43■□□□□ 0.54
TRIM41-203ENST00000503114 RIOK2Q9BVS4 552 aaKnown RBP18.43■□□□□ 0.54
TRIM41-203ENST00000503114 SPATA9Q9BWV2 254 aa18.43■□□□□ 0.54
TRIM41-203ENST00000503114 HCFC1R1Q9NWW0 138 aa18.43■□□□□ 0.54
TRIM41-203ENST00000503114 SCAMP2O15127 329 aaKnown RBP18.43■□□□□ 0.54
TRIM41-203ENST00000503114 YY2O15391 372 aa18.43■□□□□ 0.54
TRIM41-203ENST00000503114 CCL16O15467 120 aa18.43■□□□□ 0.54
TRIM41-203ENST00000503114 LEFTY1O75610 366 aa18.43■□□□□ 0.54
TRIM41-203ENST00000503114 FABP3P05413 133 aa18.43■□□□□ 0.54
TRIM41-203ENST00000503114 TYRP14679 529 aa18.43■□□□□ 0.54
TRIM41-203ENST00000503114 RANBP1P43487 201 aa18.43■□□□□ 0.54
TRIM41-203ENST00000503114 VEGFBP49765 207 aa18.43■□□□□ 0.54
TRIM41-203ENST00000503114 RAE1P78406 368 aaKnown RBP18.43■□□□□ 0.54
TRIM41-203ENST00000503114 ACSM2AQ08AH3 577 aa18.43■□□□□ 0.54
TRIM41-203ENST00000503114 TMED1Q13445 227 aa18.43■□□□□ 0.54
TRIM41-203ENST00000503114 VEZF1Q14119 521 aa18.43■□□□□ 0.54
TRIM41-203ENST00000503114 ZNF648Q5T619 568 aaPredicted RBP18.43■□□□□ 0.54
TRIM41-203ENST00000503114 ACSM2BQ68CK6 577 aa18.43■□□□□ 0.54
TRIM41-203ENST00000503114 ZNF621Q6ZSS3 439 aa18.43■□□□□ 0.54
TRIM41-203ENST00000503114 PIWIL3Q7Z3Z3 882 aaKnown RBP18.43■□□□□ 0.54
TRIM41-203ENST00000503114 RAVER1Q8IY67 606 aaKnown RBP18.43■□□□□ 0.54
TRIM41-203ENST00000503114 SYNPOQ8N3V7 929 aa18.43■□□□□ 0.54
TRIM41-203ENST00000503114 CNIH3Q8TBE1 160 aa18.43■□□□□ 0.54
TRIM41-203ENST00000503114 BTN2A2Q8WVV5 523 aa18.43■□□□□ 0.54
TRIM41-203ENST00000503114 VPS35Q96QK1 796 aa18.43■□□□□ 0.54
TRIM41-203ENST00000503114 OR4K3Q96R72 315 aa18.43■□□□□ 0.54
TRIM41-203ENST00000503114 FUNDC2Q9BWH2 189 aa18.43■□□□□ 0.54
TRIM41-203ENST00000503114 CHST8Q9H2A9 424 aa18.43■□□□□ 0.54
TRIM41-203ENST00000503114 SPHK2Q9NRA0 654 aa18.43■□□□□ 0.54
TRIM41-203ENST00000503114 TBC1D23Q9NUY8 699 aa18.43■□□□□ 0.54
TRIM41-203ENST00000503114 EXD2Q9NVH0 621 aa18.43■□□□□ 0.54
TRIM41-203ENST00000503114 ENPP5Q9UJA9 477 aa18.43■□□□□ 0.54
TRIM41-203ENST00000503114 PCDHB11Q9Y5F2 797 aa18.43■□□□□ 0.54
TRIM41-203ENST00000503114 SLC5A10A0PJK1 596 aa18.42■□□□□ 0.54
TRIM41-203ENST00000503114 TSPAN6O43657 245 aa18.42■□□□□ 0.54
TRIM41-203ENST00000503114 ADH1AP07327 375 aa18.42■□□□□ 0.54
TRIM41-203ENST00000503114 LAMP1P11279 417 aa18.42■□□□□ 0.54
TRIM41-203ENST00000503114 JUNDP17535 347 aa18.42■□□□□ 0.54
TRIM41-203ENST00000503114 DDX6P26196 483 aaKnown RBP eCLIP18.42■□□□□ 0.545e-6■■■■■ 34.8
TRIM41-203ENST00000503114 PRLHRP49683 370 aa18.42■□□□□ 0.54
TRIM41-203ENST00000503114 CLK3P49761 638 aaKnown RBP18.42■□□□□ 0.54
TRIM41-203ENST00000503114 ARHGDIAP52565 204 aa18.42■□□□□ 0.54
TRIM41-203ENST00000503114 VLDLRP98155 873 aa18.42■□□□□ 0.54
TRIM41-203ENST00000503114 GTF2H3Q13889 308 aa18.42■□□□□ 0.54
TRIM41-203ENST00000503114 E2F2Q14209 437 aa18.42■□□□□ 0.54
TRIM41-203ENST00000503114 ANKDD1AQ495B1 522 aa18.42■□□□□ 0.54
TRIM41-203ENST00000503114 LDLRAP1Q5SW96 308 aa18.42■□□□□ 0.54
TRIM41-203ENST00000503114 TECPR1Q7Z6L1 1165 aa18.42■□□□□ 0.54
TRIM41-203ENST00000503114 OR56A3Q8NH54 315 aa18.42■□□□□ 0.54
TRIM41-203ENST00000503114 MRGPRX3Q96LB0 322 aa18.42■□□□□ 0.54
TRIM41-203ENST00000503114 DUSP26Q9BV47 211 aa18.42■□□□□ 0.54
TRIM41-203ENST00000503114 RNF208Q9H0X6 261 aa18.42■□□□□ 0.54
TRIM41-203ENST00000503114 TMEM39AQ9NV64 488 aa18.42■□□□□ 0.54
TRIM41-203ENST00000503114 BTNL2Q9UIR0 455 aa18.42■□□□□ 0.54
TRIM41-203ENST00000503114 BAG5Q9UL15 447 aa18.42■□□□□ 0.54
TRIM41-203ENST00000503114 MAPRE3Q9UPY8 281 aa18.42■□□□□ 0.54
TRIM41-203ENST00000503114 BTBD3Q9Y2F9 522 aa18.42■□□□□ 0.54
TRIM41-203ENST00000503114 KIAA1549LQ6ZVL6 1849 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms