RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 RUVBL1Q9Y265 456 aaKnown RBP5.8□□□□□ -1.48
LSM3P4-201ENST00000502948 KLHL20Q9Y2M5 609 aa5.8□□□□□ -1.48
LSM3P4-201ENST00000502948 ZNF835Q9Y2P0 537 aa5.8□□□□□ -1.48
LSM3P4-201ENST00000502948 COMMD10Q9Y6G5 202 aa5.8□□□□□ -1.48
LSM3P4-201ENST00000502948 CENPEQ02224 2701 aa5.8□□□□□ -1.48
LSM3P4-201ENST00000502948 LRBAP50851 2863 aa5.79□□□□□ -1.48
LSM3P4-201ENST00000502948 APCP25054 2843 aa5.79□□□□□ -1.48
LSM3P4-201ENST00000502948 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.79□□□□□ -1.48
LSM3P4-201ENST00000502948 IGKV1-8A0A0C4DH67 115 aa5.79□□□□□ -1.48
LSM3P4-201ENST00000502948 A0A0J9YVX5 310 aa5.79□□□□□ -1.48
LSM3P4-201ENST00000502948 TCRBV7S2A1N4TA0A589 114 aa5.79□□□□□ -1.48
LSM3P4-201ENST00000502948 ASPDHA6ND91 283 aa5.79□□□□□ -1.48
LSM3P4-201ENST00000502948 IQCF5A8MTL0 148 aa5.79□□□□□ -1.48
LSM3P4-201ENST00000502948 PRSS44E7EML9 344 aa5.79□□□□□ -1.48
LSM3P4-201ENST00000502948 E7ENX8 843 aa5.79□□□□□ -1.48
LSM3P4-201ENST00000502948 MASP2O00187 686 aa5.79□□□□□ -1.48
LSM3P4-201ENST00000502948 FOXS1O43638 330 aa5.79□□□□□ -1.48
LSM3P4-201ENST00000502948 PRAMEF2O60811 474 aa5.79□□□□□ -1.48
LSM3P4-201ENST00000502948 ZG16O60844 167 aa5.79□□□□□ -1.48
LSM3P4-201ENST00000502948 ALOX12BO75342 701 aa5.79□□□□□ -1.48
LSM3P4-201ENST00000502948 WFS1O76024 890 aa5.79□□□□□ -1.48
LSM3P4-201ENST00000502948 CATP04040 527 aaKnown RBP5.79□□□□□ -1.48
LSM3P4-201ENST00000502948 ANXA5P08758 320 aa5.79□□□□□ -1.48
LSM3P4-201ENST00000502948 MPC1LP0DKB6 136 aa5.79□□□□□ -1.48
LSM3P4-201ENST00000502948 ERVK-10P10266 1014 aa5.79□□□□□ -1.48
LSM3P4-201ENST00000502948 MLNP12872 115 aa5.79□□□□□ -1.48
LSM3P4-201ENST00000502948 ENO3P13929 434 aaPredicted RBP5.79□□□□□ -1.48
LSM3P4-201ENST00000502948 CAPN3P20807 821 aa5.79□□□□□ -1.48
LSM3P4-201ENST00000502948 AVPR1BP47901 424 aa5.79□□□□□ -1.48
LSM3P4-201ENST00000502948 AGTR2P50052 363 aa5.79□□□□□ -1.48
LSM3P4-201ENST00000502948 ZNF75DP51815 510 aa5.79□□□□□ -1.48
LSM3P4-201ENST00000502948 RIPPLY3P57055 190 aa5.79□□□□□ -1.48
LSM3P4-201ENST00000502948 FOXL2P58012 376 aa5.79□□□□□ -1.48
LSM3P4-201ENST00000502948 SARNPP82979 210 aaKnown RBP5.79□□□□□ -1.48
LSM3P4-201ENST00000502948 MEF2AQ02078 507 aaPredicted RBP5.79□□□□□ -1.48
LSM3P4-201ENST00000502948 TAP2Q03519 686 aa5.79□□□□□ -1.48
LSM3P4-201ENST00000502948 PTK6Q13882 451 aa5.79□□□□□ -1.48
LSM3P4-201ENST00000502948 RPS6KA1Q15418 735 aa5.79□□□□□ -1.48
LSM3P4-201ENST00000502948 SIX1Q15475 284 aaPredicted RBP5.79□□□□□ -1.48
LSM3P4-201ENST00000502948 TTLL9Q3SXZ7 439 aa5.79□□□□□ -1.48
LSM3P4-201ENST00000502948 TMEM207Q6UWW9 146 aa5.79□□□□□ -1.48
LSM3P4-201ENST00000502948 LINC00696Q6ZRV3 163 aa5.79□□□□□ -1.48
LSM3P4-201ENST00000502948 GDF7Q7Z4P5 450 aa5.79□□□□□ -1.48
LSM3P4-201ENST00000502948 KIAA1328Q86T90 577 aa5.79□□□□□ -1.48
LSM3P4-201ENST00000502948 LAPTM4BQ86VI4 370 aa5.79□□□□□ -1.48
LSM3P4-201ENST00000502948 FJX1Q86VR8 437 aa5.79□□□□□ -1.48
LSM3P4-201ENST00000502948 CILP2Q8IUL8 1156 aa5.79□□□□□ -1.48
LSM3P4-201ENST00000502948 MCEMP1Q8IX19 187 aa5.79□□□□□ -1.48
LSM3P4-201ENST00000502948 KRT222Q8N1A0 295 aa5.79□□□□□ -1.48
LSM3P4-201ENST00000502948 ARMC10Q8N2F6 343 aa5.79□□□□□ -1.48
LSM3P4-201ENST00000502948 CSNK1A1LQ8N752 337 aa5.79□□□□□ -1.48
LSM3P4-201ENST00000502948 CCDC89Q8N998 374 aa5.79□□□□□ -1.48
LSM3P4-201ENST00000502948 RNF214Q8ND24 703 aa5.79□□□□□ -1.48
LSM3P4-201ENST00000502948 PLPP5Q8NEB5 264 aa5.79□□□□□ -1.48
LSM3P4-201ENST00000502948 CATSPER1Q8NEC5 780 aa5.79□□□□□ -1.48
LSM3P4-201ENST00000502948 CFAP61Q8NHU2 1237 aa5.79□□□□□ -1.48
LSM3P4-201ENST00000502948 SUN3Q8TAQ9 357 aa5.79□□□□□ -1.48
LSM3P4-201ENST00000502948 MCOLN3Q8TDD5 553 aa5.79□□□□□ -1.48
LSM3P4-201ENST00000502948 BRIX1Q8TDN6 353 aaKnown RBP5.79□□□□□ -1.48
LSM3P4-201ENST00000502948 PHF10Q8WUB8 498 aaKnown RBP5.79□□□□□ -1.48
LSM3P4-201ENST00000502948 KCNJ9Q92806 393 aa5.79□□□□□ -1.48
LSM3P4-201ENST00000502948 RERGQ96A58 199 aaPredicted RBP5.79□□□□□ -1.48
LSM3P4-201ENST00000502948 TM4SF19Q96DZ7 209 aa5.79□□□□□ -1.48
LSM3P4-201ENST00000502948 C14orf79Q96F83 325 aa5.79□□□□□ -1.48
LSM3P4-201ENST00000502948 SCMH1Q96GD3 660 aa5.79□□□□□ -1.48
LSM3P4-201ENST00000502948 CABS1Q96KC9 395 aa5.79□□□□□ -1.48
LSM3P4-201ENST00000502948 CNDP1Q96KN2 507 aa5.79□□□□□ -1.48
LSM3P4-201ENST00000502948 ZNF354BQ96LW1 612 aa5.79□□□□□ -1.48
LSM3P4-201ENST00000502948 MAGEB10Q96LZ2 347 aaPredicted RBP5.79□□□□□ -1.48
LSM3P4-201ENST00000502948 MIPEPQ99797 713 aa5.79□□□□□ -1.48
LSM3P4-201ENST00000502948 BAG1Q99933 345 aaPredicted RBP5.79□□□□□ -1.48
LSM3P4-201ENST00000502948 TRIM45Q9H8W5 580 aaPredicted RBP5.79□□□□□ -1.48
LSM3P4-201ENST00000502948 TMEM184CQ9NVA4 438 aa5.79□□□□□ -1.48
LSM3P4-201ENST00000502948 PIH1D1Q9NWS0 290 aaKnown RBP5.79□□□□□ -1.48
LSM3P4-201ENST00000502948 TRPC4Q9UBN4 977 aa5.79□□□□□ -1.48
LSM3P4-201ENST00000502948 SOX13Q9UN79 622 aa5.79□□□□□ -1.48
LSM3P4-201ENST00000502948 SLC22A7Q9Y694 548 aa5.79□□□□□ -1.48
LSM3P4-201ENST00000502948 NFS1Q9Y697 457 aa5.79□□□□□ -1.48
LSM3P4-201ENST00000502948 MAU2Q9Y6X3 613 aa5.79□□□□□ -1.48
LSM3P4-201ENST00000502948 CSMD1Q96PZ7 3565 aa5.78□□□□□ -1.48
LSM3P4-201ENST00000502948 GTF3C1Q12789 2109 aa5.78□□□□□ -1.48
LSM3P4-201ENST00000502948 FAM237BA0A1B0GVD1 139 aa5.78□□□□□ -1.48
LSM3P4-201ENST00000502948 ARHGEF33A8MVX0 844 aa5.78□□□□□ -1.48
LSM3P4-201ENST00000502948 ZBTB14O43829 449 aa5.78□□□□□ -1.48
LSM3P4-201ENST00000502948 WDPCPO95876 746 aa5.78□□□□□ -1.48
LSM3P4-201ENST00000502948 SLC16A8O95907 504 aa5.78□□□□□ -1.48
LSM3P4-201ENST00000502948 IFNB1P01574 187 aa5.78□□□□□ -1.48
LSM3P4-201ENST00000502948 HEXBP07686 556 aa5.78□□□□□ -1.48
LSM3P4-201ENST00000502948 C8orf89P0DMQ9 161 aa5.78□□□□□ -1.48
LSM3P4-201ENST00000502948 PRF1P14222 555 aa5.78□□□□□ -1.48
LSM3P4-201ENST00000502948 PAMP19021 973 aa5.78□□□□□ -1.48
LSM3P4-201ENST00000502948 POU3F2P20265 443 aaPredicted RBP5.78□□□□□ -1.48
LSM3P4-201ENST00000502948 CCND1P24385 295 aa5.78□□□□□ -1.48
LSM3P4-201ENST00000502948 PSMB5P28074 263 aa5.78□□□□□ -1.48
LSM3P4-201ENST00000502948 NMBRP28336 390 aa5.78□□□□□ -1.48
LSM3P4-201ENST00000502948 RPA3P35244 121 aaPredicted RBP5.78□□□□□ -1.48
LSM3P4-201ENST00000502948 RPL22P35268 128 aaKnown RBP5.78□□□□□ -1.48
LSM3P4-201ENST00000502948 CLCN7P51798 805 aa5.78□□□□□ -1.48
LSM3P4-201ENST00000502948 PNLIPRP1P54315 467 aa5.78□□□□□ -1.48
LSM3P4-201ENST00000502948 CSE1LP55060 971 aaKnown RBP5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms