RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 UBQLN3Q9H347 655 aa4.16□□□□□ -1.74
HMGB1P21-201ENST00000502313 METTL7AQ9H8H3 244 aa4.16□□□□□ -1.74
HMGB1P21-201ENST00000502313 TRPC7Q9HCX4 862 aa4.16□□□□□ -1.74
HMGB1P21-201ENST00000502313 MYNNQ9NPC7 610 aa4.16□□□□□ -1.74
HMGB1P21-201ENST00000502313 FARSBQ9NSD9 589 aaKnown RBP4.16□□□□□ -1.74
HMGB1P21-201ENST00000502313 TBC1D13Q9NVG8 400 aa4.16□□□□□ -1.74
HMGB1P21-201ENST00000502313 UBAP1Q9NZ09 502 aa4.16□□□□□ -1.74
HMGB1P21-201ENST00000502313 GRHL1Q9NZI5 618 aa4.16□□□□□ -1.74
HMGB1P21-201ENST00000502313 MALT1Q9UDY8 824 aa4.16□□□□□ -1.74
HMGB1P21-201ENST00000502313 TRMT112Q9UI30 125 aaKnown RBP4.16□□□□□ -1.74
HMGB1P21-201ENST00000502313 TEKT2Q9UIF3 430 aa4.16□□□□□ -1.74
HMGB1P21-201ENST00000502313 GPR132Q9UNW8 380 aa4.16□□□□□ -1.74
HMGB1P21-201ENST00000502313 ENTPD4Q9Y227 616 aa4.16□□□□□ -1.74
HMGB1P21-201ENST00000502313 MAB21L2Q9Y586 359 aa4.16□□□□□ -1.74
HMGB1P21-201ENST00000502313 AP4B1Q9Y6B7 739 aa4.16□□□□□ -1.74
HMGB1P21-201ENST00000502313 ZNF541Q9H0D2 1346 aa4.16□□□□□ -1.74
HMGB1P21-201ENST00000502313 TAF1P21675 1872 aa4.15□□□□□ -1.74
HMGB1P21-201ENST00000502313 CENPFP49454 3210 aa4.15□□□□□ -1.74
HMGB1P21-201ENST00000502313 SCN9AQ15858 1988 aa4.15□□□□□ -1.74
HMGB1P21-201ENST00000502313 TYW5A2RUC4 315 aaKnown RBP4.15□□□□□ -1.75
HMGB1P21-201ENST00000502313 FAM157AC9JC47 383 aa4.15□□□□□ -1.75
HMGB1P21-201ENST00000502313 K7ESM1 405 aa4.15□□□□□ -1.75
HMGB1P21-201ENST00000502313 EBAG9O00559 213 aa4.15□□□□□ -1.75
HMGB1P21-201ENST00000502313 CYR61O00622 381 aa4.15□□□□□ -1.75
HMGB1P21-201ENST00000502313 PRRG1O14668 218 aa4.15□□□□□ -1.75
HMGB1P21-201ENST00000502313 PLPP2O43688 288 aa4.15□□□□□ -1.75
HMGB1P21-201ENST00000502313 AKAP8O43823 692 aaKnown RBP4.15□□□□□ -1.75
HMGB1P21-201ENST00000502313 ZNF217O75362 1048 aa4.15□□□□□ -1.75
HMGB1P21-201ENST00000502313 CTAG2O75638 210 aa4.15□□□□□ -1.75
HMGB1P21-201ENST00000502313 GH2P01242 217 aa4.15□□□□□ -1.75
HMGB1P21-201ENST00000502313 HLA-DQA2P01906 255 aa4.15□□□□□ -1.75
HMGB1P21-201ENST00000502313 STAG3L3P0CL85 134 aa4.15□□□□□ -1.75
HMGB1P21-201ENST00000502313 SPP1P10451 314 aa4.15□□□□□ -1.75
HMGB1P21-201ENST00000502313 ITGAMP11215 1152 aa4.15□□□□□ -1.75
HMGB1P21-201ENST00000502313 RPA2P15927 270 aa4.15□□□□□ -1.75
HMGB1P21-201ENST00000502313 CKMT2P17540 419 aa4.15□□□□□ -1.75
HMGB1P21-201ENST00000502313 NDUFB7P17568 137 aa4.15□□□□□ -1.75
HMGB1P21-201ENST00000502313 CD22P20273 847 aa4.15□□□□□ -1.75
HMGB1P21-201ENST00000502313 NDUFS1P28331 727 aa4.15□□□□□ -1.75
HMGB1P21-201ENST00000502313 EPHB2P29323 1055 aa4.15□□□□□ -1.75
HMGB1P21-201ENST00000502313 PTGS2P35354 604 aa4.15□□□□□ -1.75
HMGB1P21-201ENST00000502313 EPS15P42566 896 aa4.15□□□□□ -1.75
HMGB1P21-201ENST00000502313 MMP13P45452 471 aa4.15□□□□□ -1.75
HMGB1P21-201ENST00000502313 RFX5P48382 616 aaPredicted RBP4.15□□□□□ -1.75
HMGB1P21-201ENST00000502313 PEX5P50542 639 aa4.15□□□□□ -1.75
HMGB1P21-201ENST00000502313 EIF3EP60228 445 aaKnown RBP4.15□□□□□ -1.75
HMGB1P21-201ENST00000502313 RPS8P62241 208 aaKnown RBP4.15□□□□□ -1.75
HMGB1P21-201ENST00000502313 PSG6Q00889 435 aa4.15□□□□□ -1.75
HMGB1P21-201ENST00000502313 RHAGQ02094 409 aa4.15□□□□□ -1.75
HMGB1P21-201ENST00000502313 TRDNQ13061 729 aa4.15□□□□□ -1.75
HMGB1P21-201ENST00000502313 LCP2Q13094 533 aa4.15□□□□□ -1.75
HMGB1P21-201ENST00000502313 TOB2Q14106 344 aaPredicted RBP4.15□□□□□ -1.75
HMGB1P21-201ENST00000502313 RFTN1Q14699 578 aaPredicted RBP4.15□□□□□ -1.75
HMGB1P21-201ENST00000502313 ICAM4Q14773 271 aa4.15□□□□□ -1.75
HMGB1P21-201ENST00000502313 ARHGAP19Q14CB8 494 aa4.15□□□□□ -1.75
HMGB1P21-201ENST00000502313 TCTN1Q2MV58 587 aa4.15□□□□□ -1.75
HMGB1P21-201ENST00000502313 TBC1D25Q3MII6 688 aa4.15□□□□□ -1.75
HMGB1P21-201ENST00000502313 KRT71Q3SY84 523 aa4.15□□□□□ -1.75
HMGB1P21-201ENST00000502313 FBXO48Q5FWF7 155 aa4.15□□□□□ -1.75
HMGB1P21-201ENST00000502313 C9orf50Q5SZB4 431 aa4.15□□□□□ -1.75
HMGB1P21-201ENST00000502313 CEP85Q6P2H3 762 aa4.15□□□□□ -1.75
HMGB1P21-201ENST00000502313 KCNV1Q6PIU1 500 aa4.15□□□□□ -1.75
HMGB1P21-201ENST00000502313 FIGLAQ6QHK4 219 aa4.15□□□□□ -1.75
HMGB1P21-201ENST00000502313 PRSS55Q6UWB4 352 aaPredicted RBP4.15□□□□□ -1.75
HMGB1P21-201ENST00000502313 ENPP7Q6UWV6 458 aa4.15□□□□□ -1.75
HMGB1P21-201ENST00000502313 ERASQ7Z444 233 aa4.15□□□□□ -1.75
HMGB1P21-201ENST00000502313 ASPGQ86U10 573 aa4.15□□□□□ -1.75
HMGB1P21-201ENST00000502313 DENND6AQ8IWF6 608 aa4.15□□□□□ -1.75
HMGB1P21-201ENST00000502313 SRRM1Q8IYB3 904 aaKnown RBP4.15□□□□□ -1.75
HMGB1P21-201ENST00000502313 APCDD1Q8J025 514 aa4.15□□□□□ -1.75
HMGB1P21-201ENST00000502313 ZBTB2Q8N680 514 aa4.15□□□□□ -1.75
HMGB1P21-201ENST00000502313 CCDC63Q8NA47 563 aa4.15□□□□□ -1.75
HMGB1P21-201ENST00000502313 BHLHE23Q8NDY6 225 aa4.15□□□□□ -1.75
HMGB1P21-201ENST00000502313 MYCBPAPQ8TBZ2 947 aa4.15□□□□□ -1.75
HMGB1P21-201ENST00000502313 TMEM170AQ8WVE7 144 aa4.15□□□□□ -1.75
HMGB1P21-201ENST00000502313 OIT3Q8WWZ8 545 aa4.15□□□□□ -1.75
HMGB1P21-201ENST00000502313 APBB2Q92870 758 aa4.15□□□□□ -1.75
HMGB1P21-201ENST00000502313 NACC2Q96BF6 587 aa4.15□□□□□ -1.75
HMGB1P21-201ENST00000502313 STAMBPL1Q96FJ0 436 aa4.15□□□□□ -1.75
HMGB1P21-201ENST00000502313 HARBI1Q96MB7 349 aa4.15□□□□□ -1.75
HMGB1P21-201ENST00000502313 ZNF583Q96ND8 569 aa4.15□□□□□ -1.75
HMGB1P21-201ENST00000502313 PLEKHG4BQ96PX9 1271 aa4.15□□□□□ -1.75
HMGB1P21-201ENST00000502313 USP28Q96RU2 1077 aa4.15□□□□□ -1.75
HMGB1P21-201ENST00000502313 PCDHB18PQ96TA0 734 aa4.15□□□□□ -1.75
HMGB1P21-201ENST00000502313 HIPK3Q9H422 1215 aa4.15□□□□□ -1.75
HMGB1P21-201ENST00000502313 ZNF768Q9H5H4 540 aaKnown RBP4.15□□□□□ -1.75
HMGB1P21-201ENST00000502313 XKR8Q9H6D3 395 aa4.15□□□□□ -1.75
HMGB1P21-201ENST00000502313 ACTR8Q9H981 624 aa4.15□□□□□ -1.75
HMGB1P21-201ENST00000502313 MKKSQ9NPJ1 570 aaPredicted RBP4.15□□□□□ -1.75
HMGB1P21-201ENST00000502313 TMEM74BQ9NUR3 256 aa4.15□□□□□ -1.75
HMGB1P21-201ENST00000502313 ETNK2Q9NVF9 386 aa4.15□□□□□ -1.75
HMGB1P21-201ENST00000502313 ASNSD1Q9NWL6 643 aa4.15□□□□□ -1.75
HMGB1P21-201ENST00000502313 EHD3Q9NZN3 535 aa4.15□□□□□ -1.75
HMGB1P21-201ENST00000502313 KIAA1257Q9ULG3 409 aa4.15□□□□□ -1.75
HMGB1P21-201ENST00000502313 MGAT4BQ9UQ53 548 aa4.15□□□□□ -1.75
HMGB1P21-201ENST00000502313 SH2B3Q9UQQ2 575 aa4.15□□□□□ -1.75
HMGB1P21-201ENST00000502313 SLC4A4Q9Y6R1 1079 aa4.15□□□□□ -1.75
HMGB1P21-201ENST00000502313 A0A0U1RRA0 63 aa4.14□□□□□ -1.75
HMGB1P21-201ENST00000502313 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P21-201ENST00000502313 A0A1W2PPW3 197 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms