RNA–Protein interactions for RNA: ENST00000498801.5

GARNL3-222, Transcript of GTPase activating Rap/RanGAP domain like 3, human

TSL 4

Gene GARNL3, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GARNL3-222	ENST00000498801	NUAK1	O60285	661 aa		7.22	□□□□□ -1.25
GARNL3-222	ENST00000498801	OR1I1	O60431	355 aa		7.22	□□□□□ -1.25
GARNL3-222	ENST00000498801	ERLIN1	O75477	346 aa		7.22	□□□□□ -1.25
GARNL3-222	ENST00000498801	TUSC2	O75896	110 aa		7.22	□□□□□ -1.25
GARNL3-222	ENST00000498801	PIAS1	O75925	651 aa		7.22	□□□□□ -1.25
GARNL3-222	ENST00000498801	TOX4	O94842	621 aa		7.22	□□□□□ -1.25
GARNL3-222	ENST00000498801	UBXN7	O94888	489 aa		7.22	□□□□□ -1.25
GARNL3-222	ENST00000498801	CDK14	O94921	469 aa		7.22	□□□□□ -1.25
GARNL3-222	ENST00000498801	F7	P08709	466 aa	Predicted RBP	7.22	□□□□□ -1.25
GARNL3-222	ENST00000498801	ABHD2	P08910	425 aa		7.22	□□□□□ -1.25
GARNL3-222	ENST00000498801	ZNF7	P17097	686 aa	Predicted RBP	7.22	□□□□□ -1.25
GARNL3-222	ENST00000498801	ZNF8	P17098	575 aa	Predicted RBP	7.22	□□□□□ -1.25
GARNL3-222	ENST00000498801	DGKA	P23743	735 aa		7.22	□□□□□ -1.25
GARNL3-222	ENST00000498801	NSG1	P42857	185 aa		7.22	□□□□□ -1.25
GARNL3-222	ENST00000498801	KIR2DL3	P43628	341 aa		7.22	□□□□□ -1.25
GARNL3-222	ENST00000498801	POLD2	P49005	469 aa		7.22	□□□□□ -1.25
GARNL3-222	ENST00000498801	SRP54	P61011	504 aa	Known RBP	7.22	□□□□□ -1.25
GARNL3-222	ENST00000498801	MPP1	Q00013	466 aa		7.22	□□□□□ -1.25
GARNL3-222	ENST00000498801	B4GALNT1	Q00973	533 aa		7.22	□□□□□ -1.25
GARNL3-222	ENST00000498801	PPARD	Q03181	441 aa		7.22	□□□□□ -1.25
GARNL3-222	ENST00000498801	NAB1	Q13506	487 aa		7.22	□□□□□ -1.25
GARNL3-222	ENST00000498801	BRD3	Q15059	726 aa		7.22	□□□□□ -1.25
GARNL3-222	ENST00000498801	TBR1	Q16650	682 aa		7.22	□□□□□ -1.25
GARNL3-222	ENST00000498801	KBTBD12	Q3ZCT8	623 aa		7.22	□□□□□ -1.25
GARNL3-222	ENST00000498801	ZNF789	Q5FWF6	425 aa		7.22	□□□□□ -1.25
GARNL3-222	ENST00000498801	KCTD16	Q68DU8	428 aa		7.22	□□□□□ -1.25
GARNL3-222	ENST00000498801	MARK2	Q7KZI7	788 aa	Known RBP	7.22	□□□□□ -1.25
GARNL3-222	ENST00000498801	DET1	Q7L5Y6	550 aa		7.22	□□□□□ -1.25
GARNL3-222	ENST00000498801	GALNT7	Q86SF2	657 aa		7.22	□□□□□ -1.25
GARNL3-222	ENST00000498801	SLC26A11	Q86WA9	606 aa		7.22	□□□□□ -1.25
GARNL3-222	ENST00000498801	LILRA3	Q8N6C8	439 aa	Predicted RBP	7.22	□□□□□ -1.25
GARNL3-222	ENST00000498801	POU5F2	Q8N7G0	328 aa		7.22	□□□□□ -1.25
GARNL3-222	ENST00000498801	OR4C6	Q8NH72	309 aa		7.22	□□□□□ -1.25
GARNL3-222	ENST00000498801	UBLCP1	Q8WVY7	318 aa	Predicted RBP	7.22	□□□□□ -1.25
GARNL3-222	ENST00000498801	OR1E3	Q8WZA6	343 aa		7.22	□□□□□ -1.25
GARNL3-222	ENST00000498801	LPGAT1	Q92604	370 aa		7.22	□□□□□ -1.25
GARNL3-222	ENST00000498801	RAB24	Q969Q5	203 aa		7.22	□□□□□ -1.25
GARNL3-222	ENST00000498801	TSACC	Q96A04	125 aa	Predicted RBP	7.22	□□□□□ -1.25
GARNL3-222	ENST00000498801	RGMA	Q96B86	450 aa		7.22	□□□□□ -1.25
GARNL3-222	ENST00000498801	SGF29	Q96ES7	293 aa		7.22	□□□□□ -1.25
GARNL3-222	ENST00000498801	PDXP	Q96GD0	296 aa		7.22	□□□□□ -1.25
GARNL3-222	ENST00000498801	CYTH2	Q99418	400 aa		7.22	□□□□□ -1.25
GARNL3-222	ENST00000498801	GTPBP2	Q9BX10	602 aa	Known RBP	7.22	□□□□□ -1.25
GARNL3-222	ENST00000498801	CLPB	Q9H078	707 aa		7.22	□□□□□ -1.25
GARNL3-222	ENST00000498801	MANSC1	Q9H8J5	431 aa		7.22	□□□□□ -1.25
GARNL3-222	ENST00000498801	BCO1	Q9HAY6	547 aa		7.22	□□□□□ -1.25
GARNL3-222	ENST00000498801	MRPL40	Q9NQ50	206 aa	Known RBP	7.22	□□□□□ -1.25
GARNL3-222	ENST00000498801	FBXO6	Q9NRD1	293 aa	Predicted RBP	7.22	□□□□□ -1.25
GARNL3-222	ENST00000498801	NSMCE4A	Q9NXX6	385 aa		7.22	□□□□□ -1.25
GARNL3-222	ENST00000498801	NCKIPSD	Q9NZQ3	722 aa		7.22	□□□□□ -1.25
GARNL3-222	ENST00000498801	APOBEC3B	Q9UH17	382 aa	Known RBP	7.22	□□□□□ -1.25
GARNL3-222	ENST00000498801	TRPS1	Q9UHF7	1281 aa		7.22	□□□□□ -1.25
GARNL3-222	ENST00000498801	MOSPD1	Q9UJG1	213 aa		7.22	□□□□□ -1.25
GARNL3-222	ENST00000498801	SUFU	Q9UMX1	484 aa		7.22	□□□□□ -1.25
GARNL3-222	ENST00000498801	PSAT1	Q9Y617	370 aa		7.22	□□□□□ -1.25
GARNL3-222	ENST00000498801	NEMP2	A6NFY4	417 aa		7.21	□□□□□ -1.26
GARNL3-222	ENST00000498801	OR2AG2	A6NM03	316 aa		7.21	□□□□□ -1.26
GARNL3-222	ENST00000498801	CXorf49	A8MYA2	514 aa	Predicted RBP	7.21	□□□□□ -1.26
GARNL3-222	ENST00000498801	QSOX1	O00391	747 aa		7.21	□□□□□ -1.26
GARNL3-222	ENST00000498801	AQP9	O43315	295 aa		7.21	□□□□□ -1.26
GARNL3-222	ENST00000498801	GRID2	O43424	1007 aa		7.21	□□□□□ -1.26
GARNL3-222	ENST00000498801	HAUS5	O94927	633 aa		7.21	□□□□□ -1.26
GARNL3-222	ENST00000498801	AP2A2	O94973	939 aa		7.21	□□□□□ -1.26
GARNL3-222	ENST00000498801	TNF	P01375	233 aa		7.21	□□□□□ -1.26
GARNL3-222	ENST00000498801	AHSG	P02765	367 aa		7.21	□□□□□ -1.26
GARNL3-222	ENST00000498801	VSIG10L2	P0DP72	767 aa		7.21	□□□□□ -1.26
GARNL3-222	ENST00000498801	ATP1B2	P14415	290 aa	Predicted RBP	7.21	□□□□□ -1.26
GARNL3-222	ENST00000498801	RPS3	P23396	243 aa	Known RBP eCLIP	7.21	□□□□□ -1.26
GARNL3-222	ENST00000498801	GABRB3	P28472	473 aa		7.21	□□□□□ -1.26
GARNL3-222	ENST00000498801	FMO4	P31512	558 aa		7.21	□□□□□ -1.26
GARNL3-222	ENST00000498801	HSD17B3	P37058	310 aa		7.21	□□□□□ -1.26
GARNL3-222	ENST00000498801	GNPDA1	P46926	289 aa		7.21	□□□□□ -1.26
GARNL3-222	ENST00000498801	LEPR	P48357	1165 aa	Known RBP	7.21	□□□□□ -1.26
GARNL3-222	ENST00000498801	PRLHR	P49683	370 aa		7.21	□□□□□ -1.26
GARNL3-222	ENST00000498801	CLCNKA	P51800	687 aa		7.21	□□□□□ -1.26
GARNL3-222	ENST00000498801	MAP2K6	P52564	334 aa		7.21	□□□□□ -1.26
GARNL3-222	ENST00000498801	CTSC	P53634	463 aa		7.21	□□□□□ -1.26
GARNL3-222	ENST00000498801	ADAR	P55265	1226 aa	Known RBP	7.21	□□□□□ -1.26
GARNL3-222	ENST00000498801	EIF3B	P55884	814 aa	Known RBP	7.21	□□□□□ -1.26
GARNL3-222	ENST00000498801	HGFAC	Q04756	655 aa		7.21	□□□□□ -1.26
GARNL3-222	ENST00000498801	TARDBP	Q13148	414 aa	Known RBP eCLIP	7.21	□□□□□ -1.26
GARNL3-222	ENST00000498801	ILK	Q13418	452 aa		7.21	□□□□□ -1.26
GARNL3-222	ENST00000498801	SLC29A2	Q14542	456 aa		7.21	□□□□□ -1.26
GARNL3-222	ENST00000498801	EFTUD2	Q15029	972 aa	Known RBP eCLIP	7.21	□□□□□ -1.26
GARNL3-222	ENST00000498801	UAP1	Q16222	522 aa	Predicted RBP	7.21	□□□□□ -1.26
GARNL3-222	ENST00000498801	VMAC	Q2NL98	169 aa		7.21	□□□□□ -1.26
GARNL3-222	ENST00000498801	KLHL38	Q2WGJ6	581 aa		7.21	□□□□□ -1.26
GARNL3-222	ENST00000498801	BCL7A	Q4VC05	210 aa		7.21	□□□□□ -1.26
GARNL3-222	ENST00000498801	PYCR3	Q53H96	274 aa		7.21	□□□□□ -1.26
GARNL3-222	ENST00000498801	ZNF542P	Q5EBM4	170 aa		7.21	□□□□□ -1.26
GARNL3-222	ENST00000498801	PTRHD1	Q6GMV3	140 aa	Known RBP	7.21	□□□□□ -1.26
GARNL3-222	ENST00000498801	PPP4R4	Q6NUP7	873 aa		7.21	□□□□□ -1.26
GARNL3-222	ENST00000498801	CNST	Q6PJW8	725 aa		7.21	□□□□□ -1.26
GARNL3-222	ENST00000498801	RD3	Q7Z3Z2	195 aa		7.21	□□□□□ -1.26
GARNL3-222	ENST00000498801	LRRTM4	Q86VH4	590 aa		7.21	□□□□□ -1.26
GARNL3-222	ENST00000498801	LRRC6	Q86X45	466 aa		7.21	□□□□□ -1.26
GARNL3-222	ENST00000498801	C17orf82	Q86X59	251 aa	Predicted RBP	7.21	□□□□□ -1.26
GARNL3-222	ENST00000498801	GALNT13	Q8IUC8	556 aa		7.21	□□□□□ -1.26
GARNL3-222	ENST00000498801	TRAPPC5	Q8IUR0	188 aa		7.21	□□□□□ -1.26
GARNL3-222	ENST00000498801	ZNF547	Q8IVP9	402 aa		7.21	□□□□□ -1.26

Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms