RNA–Protein interactions for RNA: ENST00000498711.1

CLTC-209, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best)

Gene CLTC, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-209ENST00000498711 NLE1Q9NVX2 485 aaPredicted RBP3.82□□□□□ -1.8
CLTC-209ENST00000498711 PCTPQ9UKL6 214 aa3.82□□□□□ -1.8
CLTC-209ENST00000498711 HS3ST4Q9Y661 456 aa3.82□□□□□ -1.8
CLTC-209ENST00000498711 A0A087WV62 115 aa3.82□□□□□ -1.8
CLTC-209ENST00000498711 A0A1B0GTL3 188 aa3.82□□□□□ -1.8
CLTC-209ENST00000498711 TMEM247A6NEH6 219 aa3.82□□□□□ -1.8
CLTC-209ENST00000498711 C16orf96A6NNT2 1141 aa3.82□□□□□ -1.8
CLTC-209ENST00000498711 E9PAM4 449 aa3.82□□□□□ -1.8
CLTC-209ENST00000498711 NR5A2O00482 541 aa3.82□□□□□ -1.8
CLTC-209ENST00000498711 KPNA4O00629 521 aaPredicted RBP3.82□□□□□ -1.8
CLTC-209ENST00000498711 KIAA0355O15063 1070 aa3.82□□□□□ -1.8
CLTC-209ENST00000498711 ANGPT2O15123 496 aa3.82□□□□□ -1.8
CLTC-209ENST00000498711 AQP9O43315 295 aa3.82□□□□□ -1.8
CLTC-209ENST00000498711 SYNCRIPO60506 623 aaKnown RBP3.82□□□□□ -1.8
CLTC-209ENST00000498711 SLC22A3O75751 556 aa3.82□□□□□ -1.8
CLTC-209ENST00000498711 RPP40O75818 363 aaKnown RBP3.82□□□□□ -1.8
CLTC-209ENST00000498711 MLYCDO95822 493 aa3.82□□□□□ -1.8
CLTC-209ENST00000498711 C1RP00736 705 aa3.82□□□□□ -1.8
CLTC-209ENST00000498711 MSL3P1P0C860 447 aa3.82□□□□□ -1.8
CLTC-209ENST00000498711 THRBP10828 461 aa3.82□□□□□ -1.8
CLTC-209ENST00000498711 AKR1A1P14550 325 aa3.82□□□□□ -1.8
CLTC-209ENST00000498711 TYMPP19971 482 aa3.82□□□□□ -1.8
CLTC-209ENST00000498711 CHRM3P20309 590 aa3.82□□□□□ -1.8
CLTC-209ENST00000498711 MSH3P20585 1137 aa3.82□□□□□ -1.8
CLTC-209ENST00000498711 JAK1P23458 1154 aa3.82□□□□□ -1.8
CLTC-209ENST00000498711 PXNP49023 591 aaPredicted RBP3.82□□□□□ -1.8
CLTC-209ENST00000498711 CLCN4P51793 760 aa3.82□□□□□ -1.8
CLTC-209ENST00000498711 POLR2JP52435 117 aaKnown RBP3.82□□□□□ -1.8
CLTC-209ENST00000498711 ZNF140P52738 457 aaPredicted RBP3.82□□□□□ -1.8
CLTC-209ENST00000498711 ATXN3P54252 364 aaPredicted RBP3.82□□□□□ -1.8
CLTC-209ENST00000498711 SLC12A2P55011 1212 aa3.82□□□□□ -1.8
CLTC-209ENST00000498711 OR4D2P58180 307 aa3.82□□□□□ -1.8
CLTC-209ENST00000498711 IFITM3Q01628 133 aa3.82□□□□□ -1.8
CLTC-209ENST00000498711 MVKQ03426 396 aa3.82□□□□□ -1.8
CLTC-209ENST00000498711 IL10RBQ08334 325 aa3.82□□□□□ -1.8
CLTC-209ENST00000498711 SPCS2Q15005 226 aa3.82□□□□□ -1.8
CLTC-209ENST00000498711 UPP1Q16831 310 aa3.82□□□□□ -1.8
CLTC-209ENST00000498711 CTU2Q2VPK5 515 aaKnown RBP3.82□□□□□ -1.8
CLTC-209ENST00000498711 SIRPB2Q5JXA9 342 aa3.82□□□□□ -1.8
CLTC-209ENST00000498711 GJC2Q5T442 439 aaPredicted RBP3.82□□□□□ -1.8
CLTC-209ENST00000498711 SYT6Q5T7P8 510 aaPredicted RBP3.82□□□□□ -1.8
CLTC-209ENST00000498711 MLIPQ5VWP3 458 aa3.82□□□□□ -1.8
CLTC-209ENST00000498711 METTL2BQ6P1Q9 378 aaKnown RBP3.82□□□□□ -1.8
CLTC-209ENST00000498711 ANKRD33Q7Z3H0 272 aa3.82□□□□□ -1.8
CLTC-209ENST00000498711 ITIH5Q86UX2 942 aa3.82□□□□□ -1.8
CLTC-209ENST00000498711 OR6Q1Q8NGQ2 317 aa3.82□□□□□ -1.8
CLTC-209ENST00000498711 STAG3L4Q8TBR4 150 aa3.82□□□□□ -1.8
CLTC-209ENST00000498711 BRSK1Q8TDC3 778 aa3.82□□□□□ -1.8
CLTC-209ENST00000498711 S100ZQ8WXG8 99 aa3.82□□□□□ -1.8
CLTC-209ENST00000498711 ABTB1Q969K4 478 aaPredicted RBP3.82□□□□□ -1.8
CLTC-209ENST00000498711 REXO5Q96IC2 774 aaKnown RBP3.82□□□□□ -1.8
CLTC-209ENST00000498711 HRASLS5Q96KN8 279 aa3.82□□□□□ -1.8
CLTC-209ENST00000498711 TBATAQ96M53 351 aa3.82□□□□□ -1.8
CLTC-209ENST00000498711 CEP295NLQ96MC4 621 aa3.82□□□□□ -1.8
CLTC-209ENST00000498711 ZNF300Q96RE9 604 aaPredicted RBP3.82□□□□□ -1.8
CLTC-209ENST00000498711 ZNF382Q96SR6 550 aa3.82□□□□□ -1.8
CLTC-209ENST00000498711 KCTD14Q9BQ13 255 aaPredicted RBP3.82□□□□□ -1.8
CLTC-209ENST00000498711 AMBRA1Q9C0C7 1298 aa3.82□□□□□ -1.8
CLTC-209ENST00000498711 ALG9Q9H6U8 611 aa3.82□□□□□ -1.8
CLTC-209ENST00000498711 CARS2Q9HA77 564 aaKnown RBP3.82□□□□□ -1.8
CLTC-209ENST00000498711 FANCEQ9HB96 536 aa3.82□□□□□ -1.8
CLTC-209ENST00000498711 GOLGA2P5Q9HBQ8 144 aa3.82□□□□□ -1.8
CLTC-209ENST00000498711 SYTL2Q9HCH5 934 aa3.82□□□□□ -1.8
CLTC-209ENST00000498711 MIOSQ9NXC5 875 aa3.82□□□□□ -1.8
CLTC-209ENST00000498711 DNAJB9Q9UBS3 223 aa3.82□□□□□ -1.8
CLTC-209ENST00000498711 PAIP2BQ9ULR5 123 aaKnown RBP3.82□□□□□ -1.8
CLTC-209ENST00000498711 MAN2B2Q9Y2E5 1009 aa3.82□□□□□ -1.8
CLTC-209ENST00000498711 TDRKHQ9Y2W6 561 aaKnown RBP3.82□□□□□ -1.8
CLTC-209ENST00000498711 FAM32AQ9Y421 112 aaKnown RBP3.82□□□□□ -1.8
CLTC-209ENST00000498711 A3GALT2U3KPV4 340 aa3.82□□□□□ -1.8
CLTC-209ENST00000498711 MN1Q10571 1320 aaPredicted RBP3.82□□□□□ -1.8
CLTC-209ENST00000498711 FAM149AA5PLN7 773 aa3.81□□□□□ -1.8
CLTC-209ENST00000498711 HTR3EA5X5Y0 456 aa3.81□□□□□ -1.8
CLTC-209ENST00000498711 H7C0S8 307 aa3.81□□□□□ -1.8
CLTC-209ENST00000498711 ZNF623O75123 536 aa3.81□□□□□ -1.8
CLTC-209ENST00000498711 SCELO95171 688 aa3.81□□□□□ -1.8
CLTC-209ENST00000498711 BCL10O95999 233 aa3.81□□□□□ -1.8
CLTC-209ENST00000498711 GOT2P00505 430 aaKnown RBP3.81□□□□□ -1.8
CLTC-209ENST00000498711 RETP07949 1114 aa3.81□□□□□ -1.8
CLTC-209ENST00000498711 ANXA6P08133 673 aa3.81□□□□□ -1.8
CLTC-209ENST00000498711 CELA3BP08861 270 aa3.81□□□□□ -1.8
CLTC-209ENST00000498711 SLC2A3P11169 496 aa3.81□□□□□ -1.8
CLTC-209ENST00000498711 HGFP14210 728 aa3.81□□□□□ -1.8
CLTC-209ENST00000498711 ZNF182P17025 639 aaPredicted RBP3.81□□□□□ -1.8
CLTC-209ENST00000498711 HLA-DPA1P20036 260 aa3.81□□□□□ -1.8
CLTC-209ENST00000498711 PCSK1P29120 753 aa3.81□□□□□ -1.8
CLTC-209ENST00000498711 CCR1P32246 355 aa3.81□□□□□ -1.8
CLTC-209ENST00000498711 IDUAP35475 653 aa3.81□□□□□ -1.8
CLTC-209ENST00000498711 PBX3P40426 434 aa3.81□□□□□ -1.8
CLTC-209ENST00000498711 GPR15P49685 360 aa3.81□□□□□ -1.8
CLTC-209ENST00000498711 HK3P52790 923 aa3.81□□□□□ -1.8
CLTC-209ENST00000498711 UFM1P61960 85 aa3.81□□□□□ -1.8
CLTC-209ENST00000498711 CAP1Q01518 475 aa3.81□□□□□ -1.8
CLTC-209ENST00000498711 MGAT3Q09327 533 aa3.81□□□□□ -1.8
CLTC-209ENST00000498711 TMEM62Q0P6H9 643 aa3.81□□□□□ -1.8
CLTC-209ENST00000498711 DBPQ10586 325 aaPredicted RBP3.81□□□□□ -1.8
CLTC-209ENST00000498711 IL10RAQ13651 578 aa3.81□□□□□ -1.8
CLTC-209ENST00000498711 CAPRIN1Q14444 709 aaKnown RBP3.81□□□□□ -1.8
CLTC-209ENST00000498711 SMAD1Q15797 465 aaKnown RBP3.81□□□□□ -1.8
CLTC-209ENST00000498711 CYP51A1Q16850 503 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms