RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 UTP11Q9Y3A2 253 aaKnown RBP17.65■□□□□ 0.42
PRKCB-209ENST00000498058 MYO1CO00159 1063 aa17.64■□□□□ 0.41
PRKCB-209ENST00000498058 TTI1O43156 1089 aa17.64■□□□□ 0.41
PRKCB-209ENST00000498058 PSIP1O75475 530 aaKnown RBP17.64■□□□□ 0.41
PRKCB-209ENST00000498058 HPP00738 406 aa17.64■□□□□ 0.41
PRKCB-209ENST00000498058 CELA2AP08217 269 aa17.64■□□□□ 0.41
PRKCB-209ENST00000498058 COX6A1P12074 109 aa17.64■□□□□ 0.41
PRKCB-209ENST00000498058 TPSB2P20231 275 aa17.64■□□□□ 0.41
PRKCB-209ENST00000498058 ATP5DP30049 168 aa17.64■□□□□ 0.41
PRKCB-209ENST00000498058 CMPK1P30085 196 aa17.64■□□□□ 0.41
PRKCB-209ENST00000498058 GPS1Q13098 491 aa17.64■□□□□ 0.41
PRKCB-209ENST00000498058 MFAP5Q13361 173 aa17.64■□□□□ 0.41
PRKCB-209ENST00000498058 TRIP13Q15645 432 aaPredicted RBP17.64■□□□□ 0.41
PRKCB-209ENST00000498058 TPSAB1Q15661 275 aa17.64■□□□□ 0.41
PRKCB-209ENST00000498058 KLHL38Q2WGJ6 581 aa17.64■□□□□ 0.41
PRKCB-209ENST00000498058 ANKRD22Q5VYY1 191 aa17.64■□□□□ 0.41
PRKCB-209ENST00000498058 PRMT9Q6P2P2 845 aa17.64■□□□□ 0.41
PRKCB-209ENST00000498058 ISLR2Q6UXK2 745 aa17.64■□□□□ 0.41
PRKCB-209ENST00000498058 PPFIBP2Q8ND30 876 aa17.64■□□□□ 0.41
PRKCB-209ENST00000498058 GIMAP7Q8NHV1 300 aa17.64■□□□□ 0.41
PRKCB-209ENST00000498058 FOPNLQ96NB1 174 aa17.64■□□□□ 0.41
PRKCB-209ENST00000498058 RUVBL1Q9Y265 456 aaKnown RBP17.64■□□□□ 0.41
PRKCB-209ENST00000498058 CPAMD8Q8IZJ3 1885 aa17.63■□□□□ 0.41
PRKCB-209ENST00000498058 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.63■□□□□ 0.41
PRKCB-209ENST00000498058 RAD51CO43502 376 aa17.63■□□□□ 0.41
PRKCB-209ENST00000498058 FOXS1O43638 330 aa17.63■□□□□ 0.41
PRKCB-209ENST00000498058 ESR1P03372 595 aa17.63■□□□□ 0.41
PRKCB-209ENST00000498058 ACPPP15309 386 aa17.63■□□□□ 0.41
PRKCB-209ENST00000498058 CHRM3P20309 590 aa17.63■□□□□ 0.41
PRKCB-209ENST00000498058 FBLP22087 321 aaKnown RBP17.63■□□□□ 0.41
PRKCB-209ENST00000498058 CLCN7P51798 805 aa17.63■□□□□ 0.41
PRKCB-209ENST00000498058 ADARP55265 1226 aaKnown RBP17.63■□□□□ 0.41
PRKCB-209ENST00000498058 OCA2Q04671 838 aa17.63■□□□□ 0.41
PRKCB-209ENST00000498058 CDC16Q13042 620 aa17.63■□□□□ 0.41
PRKCB-209ENST00000498058 ELOAQ14241 798 aaKnown RBP17.63■□□□□ 0.41
PRKCB-209ENST00000498058 SYT16Q17RD7 645 aa17.63■□□□□ 0.41
PRKCB-209ENST00000498058 MUM1Q2TAK8 710 aa17.63■□□□□ 0.41
PRKCB-209ENST00000498058 ANKRD20A4Q4UJ75 823 aa17.63■□□□□ 0.41
PRKCB-209ENST00000498058 KIAA0930Q6ICG6 404 aaPredicted RBP17.63■□□□□ 0.41
PRKCB-209ENST00000498058 ZNF425Q6IV72 752 aa17.63■□□□□ 0.41
PRKCB-209ENST00000498058 MRNIPQ6NTE8 343 aa17.63■□□□□ 0.41
PRKCB-209ENST00000498058 CAND1Q86VP6 1230 aaKnown RBP17.63■□□□□ 0.41
PRKCB-209ENST00000498058 RAB42Q8N4Z0 105 aa17.63■□□□□ 0.41
PRKCB-209ENST00000498058 AMER3Q8N944 861 aa17.63■□□□□ 0.41
PRKCB-209ENST00000498058 FAR1Q8WVX9 515 aa17.63■□□□□ 0.41
PRKCB-209ENST00000498058 OR2A5Q96R48 311 aa17.63■□□□□ 0.41
PRKCB-209ENST00000498058 MRPS30Q9NP92 439 aaKnown RBP17.63■□□□□ 0.41
PRKCB-209ENST00000498058 AGPAT4Q9NRZ5 378 aa17.63■□□□□ 0.41
PRKCB-209ENST00000498058 PLA2G3Q9NZ20 509 aa17.63■□□□□ 0.41
PRKCB-209ENST00000498058 TAC3Q9UHF0 121 aa17.63■□□□□ 0.41
PRKCB-209ENST00000498058 OSGIN2Q9Y236 505 aa17.63■□□□□ 0.41
PRKCB-209ENST00000498058 MAP2K7O14733 419 aa17.62■□□□□ 0.41
PRKCB-209ENST00000498058 P2RX6O15547 441 aa17.62■□□□□ 0.41
PRKCB-209ENST00000498058 PKMP14618 531 aaKnown RBP17.62■□□□□ 0.41
PRKCB-209ENST00000498058 OGNP20774 298 aaKnown RBP17.62■□□□□ 0.41
PRKCB-209ENST00000498058 SOX11P35716 441 aa17.62■□□□□ 0.41
PRKCB-209ENST00000498058 CARSP49589 748 aaKnown RBP17.62■□□□□ 0.41
PRKCB-209ENST00000498058 VPS41P49754 854 aa17.62■□□□□ 0.41
PRKCB-209ENST00000498058 EEF1A2Q05639 463 aaKnown RBP17.62■□□□□ 0.41
PRKCB-209ENST00000498058 FAAH2Q6GMR7 532 aa17.62■□□□□ 0.41
PRKCB-209ENST00000498058 ZNF549Q6P9A3 640 aa17.62■□□□□ 0.41
PRKCB-209ENST00000498058 PCGF5Q86SE9 256 aa17.62■□□□□ 0.41
PRKCB-209ENST00000498058 SDCCAG8Q86SQ7 713 aaPredicted RBP17.62■□□□□ 0.41
PRKCB-209ENST00000498058 CILP2Q8IUL8 1156 aa17.62■□□□□ 0.41
PRKCB-209ENST00000498058 LRRC56Q8IYG6 542 aaPredicted RBP17.62■□□□□ 0.41
PRKCB-209ENST00000498058 AGGF1Q8N302 714 aaeCLIP17.62■□□□□ 0.418e-10■■■■□ 19.5
PRKCB-209ENST00000498058 CSNK1A1LQ8N752 337 aa17.62■□□□□ 0.41
PRKCB-209ENST00000498058 BBOF1Q8ND07 529 aa17.62■□□□□ 0.41
PRKCB-209ENST00000498058 MAGEC3Q8TD91 643 aa17.62■□□□□ 0.41
PRKCB-209ENST00000498058 ZNF480Q8WV37 535 aa17.62■□□□□ 0.41
PRKCB-209ENST00000498058 SMPDL3AQ92484 453 aa17.62■□□□□ 0.41
PRKCB-209ENST00000498058 CABS1Q96KC9 395 aa17.62■□□□□ 0.41
PRKCB-209ENST00000498058 LMF1Q96S06 567 aa17.62■□□□□ 0.41
PRKCB-209ENST00000498058 TCF12Q99081 682 aa17.62■□□□□ 0.41
PRKCB-209ENST00000498058 ERP44Q9BS26 406 aa17.62■□□□□ 0.41
PRKCB-209ENST00000498058 EPS8L2Q9H6S3 715 aa17.62■□□□□ 0.41
PRKCB-209ENST00000498058 MRPS2Q9Y399 296 aaKnown RBP17.62■□□□□ 0.41
PRKCB-209ENST00000498058 NEU2Q9Y3R4 380 aa17.62■□□□□ 0.41
PRKCB-209ENST00000498058 EFCAB8A8MWE9 144 aa17.61■□□□□ 0.41
PRKCB-209ENST00000498058 IDSB3KWA1 339 aa17.61■□□□□ 0.41
PRKCB-209ENST00000498058 SMAPO00193 183 aa17.61■□□□□ 0.41
PRKCB-209ENST00000498058 LRRTM2O43300 516 aa17.61■□□□□ 0.41
PRKCB-209ENST00000498058 PRR35P0CG20 571 aa17.61■□□□□ 0.41
PRKCB-209ENST00000498058 RPA3P35244 121 aaPredicted RBP17.61■□□□□ 0.41
PRKCB-209ENST00000498058 SLC26A3P40879 764 aa17.61■□□□□ 0.41
PRKCB-209ENST00000498058 MAGEA6P43360 314 aa17.61■□□□□ 0.41
PRKCB-209ENST00000498058 PNLIPRP1P54315 467 aa17.61■□□□□ 0.41
PRKCB-209ENST00000498058 EMP2P54851 167 aa17.61■□□□□ 0.41
PRKCB-209ENST00000498058 EMP3P54852 163 aa17.61■□□□□ 0.41
PRKCB-209ENST00000498058 SRSF11Q05519 484 aaKnown RBP17.61■□□□□ 0.41
PRKCB-209ENST00000498058 CUL1Q13616 776 aa17.61■□□□□ 0.41
PRKCB-209ENST00000498058 TSTA3Q13630 321 aaPredicted RBP17.61■□□□□ 0.41
PRKCB-209ENST00000498058 DSG2Q14126 1118 aa17.61■□□□□ 0.41
PRKCB-209ENST00000498058 TLR1Q15399 786 aa17.61■□□□□ 0.41
PRKCB-209ENST00000498058 RNF187Q5TA31 235 aaPredicted RBP17.61■□□□□ 0.41
PRKCB-209ENST00000498058 IRAK1BP1Q5VVH5 260 aa17.61■□□□□ 0.41
PRKCB-209ENST00000498058 ICE2Q659A1 982 aa17.61■□□□□ 0.41
PRKCB-209ENST00000498058 B3GNTL1Q67FW5 361 aaPredicted RBP17.61■□□□□ 0.41
PRKCB-209ENST00000498058 NEPROQ6NW34 567 aa17.61■□□□□ 0.41
PRKCB-209ENST00000498058 CYHR1Q6ZMK1 362 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms