RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 CFAP58Q5T655 872 aa4.76□□□□□ -1.65
SF3B1-212ENST00000496458 SECISBP2LQ93073 1101 aaKnown RBP4.76□□□□□ -1.65
SF3B1-212ENST00000496458 PRRG4Q9BZD6 226 aa4.76□□□□□ -1.65
SF3B1-212ENST00000496458 ZMYND12Q9H0C1 365 aa4.76□□□□□ -1.65
SF3B1-212ENST00000496458 Q9H8V8 135 aa4.76□□□□□ -1.65
SF3B1-212ENST00000496458 ARGLU1Q9NWB6 273 aaPredicted RBP4.76□□□□□ -1.65
SF3B1-212ENST00000496458 THEGQ9P2T0 379 aa4.76□□□□□ -1.65
SF3B1-212ENST00000496458 ABCA10Q8WWZ4 1543 aa4.76□□□□□ -1.65
SF3B1-212ENST00000496458 GRIN2BQ13224 1484 aa4.75□□□□□ -1.65
SF3B1-212ENST00000496458 EDDM13A0A1B0GTR0 161 aa4.75□□□□□ -1.65
SF3B1-212ENST00000496458 TCRBV21S2A2A0A5A6 115 aa4.75□□□□□ -1.65
SF3B1-212ENST00000496458 SNURFLB1AK76 121 aa4.75□□□□□ -1.65
SF3B1-212ENST00000496458 ACSL3O95573 720 aa4.75□□□□□ -1.65
SF3B1-212ENST00000496458 AKR1B1P15121 316 aa4.75□□□□□ -1.65
SF3B1-212ENST00000496458 CD27P26842 260 aa4.75□□□□□ -1.65
SF3B1-212ENST00000496458 PCGF2P35227 344 aa4.75□□□□□ -1.65
SF3B1-212ENST00000496458 LHX1P48742 406 aa4.75□□□□□ -1.65
SF3B1-212ENST00000496458 SLC8A3P57103 927 aa4.75□□□□□ -1.65
SF3B1-212ENST00000496458 FASTKD3Q14CZ7 662 aaKnown RBP4.75□□□□□ -1.65
SF3B1-212ENST00000496458 EFTUD2Q15029 972 aaKnown RBP eCLIP4.75□□□□□ -1.65
SF3B1-212ENST00000496458 EXT1Q16394 746 aa4.75□□□□□ -1.65
SF3B1-212ENST00000496458 HECTD3Q5T447 861 aa4.75□□□□□ -1.65
SF3B1-212ENST00000496458 CENPVQ7Z7K6 275 aaPredicted RBP4.75□□□□□ -1.65
SF3B1-212ENST00000496458 LMNTD2Q8IXW0 634 aa4.75□□□□□ -1.65
SF3B1-212ENST00000496458 KLHDC1Q8N7A1 406 aa4.75□□□□□ -1.65
SF3B1-212ENST00000496458 SLC37A3Q8NCC5 494 aa4.75□□□□□ -1.65
SF3B1-212ENST00000496458 MTMR12Q9C0I1 747 aa4.75□□□□□ -1.65
SF3B1-212ENST00000496458 PIH1D3Q9NQM4 214 aaKnown RBP4.75□□□□□ -1.65
SF3B1-212ENST00000496458 MRGBPQ9NV56 204 aa4.75□□□□□ -1.65
SF3B1-212ENST00000496458 TEX10Q9NXF1 929 aaPredicted RBP4.75□□□□□ -1.65
SF3B1-212ENST00000496458 MORF4L1Q9UBU8 362 aa4.75□□□□□ -1.65
SF3B1-212ENST00000496458 KLK13Q9UKR3 277 aa4.75□□□□□ -1.65
SF3B1-212ENST00000496458 SNX5Q9Y5X3 404 aa4.75□□□□□ -1.65
SF3B1-212ENST00000496458 CSNK1G3Q9Y6M4 447 aa4.75□□□□□ -1.65
SF3B1-212ENST00000496458 WDR97A6NE52 1622 aa4.75□□□□□ -1.65
SF3B1-212ENST00000496458 SNAPC4Q5SXM2 1469 aa4.75□□□□□ -1.65
SF3B1-212ENST00000496458 CHD1O14646 1710 aa4.75□□□□□ -1.65
SF3B1-212ENST00000496458 PASKQ96RG2 1323 aa4.74□□□□□ -1.65
SF3B1-212ENST00000496458 PBRM1Q86U86 1689 aa4.74□□□□□ -1.65
SF3B1-212ENST00000496458 SOCS3O14543 225 aa4.74□□□□□ -1.65
SF3B1-212ENST00000496458 PTGESO14684 152 aa4.74□□□□□ -1.65
SF3B1-212ENST00000496458 P4HA2O15460 535 aa4.74□□□□□ -1.65
SF3B1-212ENST00000496458 IDH3BO43837 385 aa4.74□□□□□ -1.65
SF3B1-212ENST00000496458 PSMD10O75832 226 aa4.74□□□□□ -1.65
SF3B1-212ENST00000496458 BAG2O95816 211 aa4.74□□□□□ -1.65
SF3B1-212ENST00000496458 IGHEP01854 428 aa4.74□□□□□ -1.65
SF3B1-212ENST00000496458 DNTTP04053 509 aa4.74□□□□□ -1.65
SF3B1-212ENST00000496458 ACADSP16219 412 aa4.74□□□□□ -1.65
SF3B1-212ENST00000496458 CYP11B2P19099 503 aa4.74□□□□□ -1.65
SF3B1-212ENST00000496458 CD22P20273 847 aa4.74□□□□□ -1.65
SF3B1-212ENST00000496458 SHC1P29353 583 aa4.74□□□□□ -1.65
SF3B1-212ENST00000496458 ALDH3A2P51648 485 aa4.74□□□□□ -1.65
SF3B1-212ENST00000496458 VAMP7P51809 220 aa4.74□□□□□ -1.65
SF3B1-212ENST00000496458 XGP55808 180 aa4.74□□□□□ -1.65
SF3B1-212ENST00000496458 CALCOCO2Q13137 446 aa4.74□□□□□ -1.65
SF3B1-212ENST00000496458 NFATC2Q13469 925 aa4.74□□□□□ -1.65
SF3B1-212ENST00000496458 ALCAMQ13740 583 aa4.74□□□□□ -1.65
SF3B1-212ENST00000496458 BECN1Q14457 450 aa4.74□□□□□ -1.65
SF3B1-212ENST00000496458 GPR139Q6DWJ6 353 aa4.74□□□□□ -1.65
SF3B1-212ENST00000496458 CASC1Q6TDU7 716 aa4.74□□□□□ -1.65
SF3B1-212ENST00000496458 ZBTB49Q6ZSB9 765 aa4.74□□□□□ -1.65
SF3B1-212ENST00000496458 P2RY8Q86VZ1 359 aa4.74□□□□□ -1.65
SF3B1-212ENST00000496458 POMGNT2Q8NAT1 580 aa4.74□□□□□ -1.65
SF3B1-212ENST00000496458 POGLUT1Q8NBL1 392 aa4.74□□□□□ -1.65
SF3B1-212ENST00000496458 SLC4A11Q8NBS3 891 aa4.74□□□□□ -1.65
SF3B1-212ENST00000496458 GTF3AQ92664 365 aaKnown RBP4.74□□□□□ -1.65
SF3B1-212ENST00000496458 LINC00615Q96LM1 132 aaPredicted RBP4.74□□□□□ -1.65
SF3B1-212ENST00000496458 SPAG5Q96R06 1193 aa4.74□□□□□ -1.65
SF3B1-212ENST00000496458 LPAR4Q99677 370 aa4.74□□□□□ -1.65
SF3B1-212ENST00000496458 BAG1Q99933 345 aaPredicted RBP4.74□□□□□ -1.65
SF3B1-212ENST00000496458 GPATCH1Q9BRR8 931 aaKnown RBP4.74□□□□□ -1.65
SF3B1-212ENST00000496458 MRPL9Q9BYD2 267 aaKnown RBP4.74□□□□□ -1.65
SF3B1-212ENST00000496458 RPS10P5Q9NQ39 176 aa4.74□□□□□ -1.65
SF3B1-212ENST00000496458 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.74□□□□□ -1.65
SF3B1-212ENST00000496458 CFDP1Q9UEE9 299 aaPredicted RBP4.74□□□□□ -1.65
SF3B1-212ENST00000496458 ODF2LQ9ULJ1 636 aa4.74□□□□□ -1.65
SF3B1-212ENST00000496458 ABCA5Q8WWZ7 1642 aa4.73□□□□□ -1.65
SF3B1-212ENST00000496458 TRBC2A0A5B9 178 aa4.73□□□□□ -1.65
SF3B1-212ENST00000496458 H7C0S8 307 aa4.73□□□□□ -1.65
SF3B1-212ENST00000496458 O00370 1275 aa4.73□□□□□ -1.65
SF3B1-212ENST00000496458 SPRY1O43609 319 aaPredicted RBP4.73□□□□□ -1.65
SF3B1-212ENST00000496458 C22orf31O95567 290 aa4.73□□□□□ -1.65
SF3B1-212ENST00000496458 TSFMP43897 325 aaKnown RBP4.73□□□□□ -1.65
SF3B1-212ENST00000496458 DNA2P51530 1060 aa4.73□□□□□ -1.65
SF3B1-212ENST00000496458 MS4A2Q01362 244 aa4.73□□□□□ -1.65
SF3B1-212ENST00000496458 ELAVL2Q12926 359 aaKnown RBP4.73□□□□□ -1.65
SF3B1-212ENST00000496458 RAPSNQ13702 412 aa4.73□□□□□ -1.65
SF3B1-212ENST00000496458 PTPRCAPQ14761 206 aa4.73□□□□□ -1.65
SF3B1-212ENST00000496458 MTF1Q14872 753 aa4.73□□□□□ -1.65
SF3B1-212ENST00000496458 MOGAT2Q3SYC2 334 aa4.73□□□□□ -1.65
SF3B1-212ENST00000496458 OR4A47Q6IF82 309 aa4.73□□□□□ -1.65
SF3B1-212ENST00000496458 PLBD1Q6P4A8 553 aa4.73□□□□□ -1.65
SF3B1-212ENST00000496458 LEKR1Q6ZMV7 388 aa4.73□□□□□ -1.65
SF3B1-212ENST00000496458 DET1Q7L5Y6 550 aa4.73□□□□□ -1.65
SF3B1-212ENST00000496458 KRT74Q7RTS7 529 aa4.73□□□□□ -1.65
SF3B1-212ENST00000496458 CATSPERDQ86XM0 798 aa4.73□□□□□ -1.65
SF3B1-212ENST00000496458 PRSS33Q8NF86 280 aa4.73□□□□□ -1.65
SF3B1-212ENST00000496458 NUP37Q8NFH4 326 aa4.73□□□□□ -1.65
SF3B1-212ENST00000496458 RADILQ96JH8 1075 aa4.73□□□□□ -1.65
SF3B1-212ENST00000496458 CPNE1Q99829 537 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms