RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 SLC29A3Q9BZD2 475 aa12.14□□□□□ -0.47
PTPRF-214ENST00000496043 PCBD2Q9H0N5 130 aa12.14□□□□□ -0.47
PTPRF-214ENST00000496043 KCNF1Q9H3M0 494 aa12.14□□□□□ -0.47
PTPRF-214ENST00000496043 PARVBQ9HBI1 364 aa12.14□□□□□ -0.47
PTPRF-214ENST00000496043 C3orf18Q9UK00 162 aa12.14□□□□□ -0.47
PTPRF-214ENST00000496043 RUVBL1Q9Y265 456 aaKnown RBP12.14□□□□□ -0.47
PTPRF-214ENST00000496043 ANKRD12Q6UB98 2062 aa12.14□□□□□ -0.47
PTPRF-214ENST00000496043 PCM1Q15154 2024 aa12.13□□□□□ -0.47
PTPRF-214ENST00000496043 IGLV3-12A0A075B6K2 115 aa12.13□□□□□ -0.47
PTPRF-214ENST00000496043 SLC16A5O15375 505 aa12.13□□□□□ -0.47
PTPRF-214ENST00000496043 C8GP07360 202 aa12.13□□□□□ -0.47
PTPRF-214ENST00000496043 ANXA5P08758 320 aa12.13□□□□□ -0.47
PTPRF-214ENST00000496043 HIST1H2AGP0C0S8 130 aaPredicted RBP12.13□□□□□ -0.47
PTPRF-214ENST00000496043 HIST1H2ADP20671 130 aa12.13□□□□□ -0.47
PTPRF-214ENST00000496043 CXCR2P25025 360 aa12.13□□□□□ -0.47
PTPRF-214ENST00000496043 IVDP26440 423 aa12.13□□□□□ -0.47
PTPRF-214ENST00000496043 GABRB3P28472 473 aa12.13□□□□□ -0.47
PTPRF-214ENST00000496043 IMPA1P29218 277 aa12.13□□□□□ -0.47
PTPRF-214ENST00000496043 GLRBP48167 497 aa12.13□□□□□ -0.47
PTPRF-214ENST00000496043 GNG11P61952 73 aa12.13□□□□□ -0.47
PTPRF-214ENST00000496043 TIAL1Q01085 375 aaKnown RBP eCLIP12.13□□□□□ -0.47
PTPRF-214ENST00000496043 DSG2Q14126 1118 aa12.13□□□□□ -0.47
PTPRF-214ENST00000496043 MORF4L2Q15014 288 aa12.13□□□□□ -0.47
PTPRF-214ENST00000496043 HKDC1Q2TB90 917 aa12.13□□□□□ -0.47
PTPRF-214ENST00000496043 MSS51Q4VC12 460 aa12.13□□□□□ -0.47
PTPRF-214ENST00000496043 VWA2Q5GFL6 755 aa12.13□□□□□ -0.47
PTPRF-214ENST00000496043 ATG9BQ674R7 924 aa12.13□□□□□ -0.47
PTPRF-214ENST00000496043 PAQR3Q6TCH7 311 aa12.13□□□□□ -0.47
PTPRF-214ENST00000496043 LAPTM4BQ86VI4 370 aa12.13□□□□□ -0.47
PTPRF-214ENST00000496043 IGDCC3Q8IVU1 814 aa12.13□□□□□ -0.47
PTPRF-214ENST00000496043 KLHL7Q8IXQ5 586 aa12.13□□□□□ -0.47
PTPRF-214ENST00000496043 MYO1HQ8N1T3 1032 aa12.13□□□□□ -0.47
PTPRF-214ENST00000496043 CISD2Q8N5K1 135 aaKnown RBP12.13□□□□□ -0.47
PTPRF-214ENST00000496043 OR11G2Q8NGC1 345 aa12.13□□□□□ -0.47
PTPRF-214ENST00000496043 ANP32BQ92688 251 aaKnown RBP12.13□□□□□ -0.47
PTPRF-214ENST00000496043 SNRNP40Q96DI7 357 aaKnown RBP12.13□□□□□ -0.47
PTPRF-214ENST00000496043 HIST1H2AHQ96KK5 128 aa12.13□□□□□ -0.47
PTPRF-214ENST00000496043 NDNQ99608 321 aa12.13□□□□□ -0.47
PTPRF-214ENST00000496043 HIST1H2AJQ99878 128 aa12.13□□□□□ -0.47
PTPRF-214ENST00000496043 H2AFJQ9BTM1 129 aa12.13□□□□□ -0.47
PTPRF-214ENST00000496043 LHPPQ9H008 270 aa12.13□□□□□ -0.47
PTPRF-214ENST00000496043 ILKAPQ9H0C8 392 aaPredicted RBP12.13□□□□□ -0.47
PTPRF-214ENST00000496043 PPANQ9NQ55 473 aaKnown RBP12.13□□□□□ -0.47
PTPRF-214ENST00000496043 CCDC177Q9NQR7 707 aaPredicted RBP12.13□□□□□ -0.47
PTPRF-214ENST00000496043 TRPC4Q9UBN4 977 aa12.13□□□□□ -0.47
PTPRF-214ENST00000496043 PDE10AQ9Y233 779 aa12.13□□□□□ -0.47
PTPRF-214ENST00000496043 UBR5O95071 2799 aaPredicted RBP12.13□□□□□ -0.47
PTPRF-214ENST00000496043 PCSK5Q92824 1860 aa12.12□□□□□ -0.47
PTPRF-214ENST00000496043 FER1L5A0AVI2 2057 aa12.12□□□□□ -0.47
PTPRF-214ENST00000496043 KCNE1BA0A087WTH5 132 aa12.12□□□□□ -0.47
PTPRF-214ENST00000496043 TCP11X1B4DZS4 312 aa12.12□□□□□ -0.47
PTPRF-214ENST00000496043 MAP2K7O14733 419 aa12.12□□□□□ -0.47
PTPRF-214ENST00000496043 HAT1O14929 419 aa12.12□□□□□ -0.47
PTPRF-214ENST00000496043 ALOX12BO75342 701 aa12.12□□□□□ -0.47
PTPRF-214ENST00000496043 BANF1O75531 89 aa12.12□□□□□ -0.47
PTPRF-214ENST00000496043 HPP00738 406 aa12.12□□□□□ -0.47
PTPRF-214ENST00000496043 HEXBP07686 556 aa12.12□□□□□ -0.47
PTPRF-214ENST00000496043 ACPPP15309 386 aa12.12□□□□□ -0.47
PTPRF-214ENST00000496043 SLC26A3P40879 764 aa12.12□□□□□ -0.47
PTPRF-214ENST00000496043 PAFAH1B1P43034 410 aa12.12□□□□□ -0.47
PTPRF-214ENST00000496043 AVPR1BP47901 424 aa12.12□□□□□ -0.47
PTPRF-214ENST00000496043 UQCRFS1P47985 274 aa12.12□□□□□ -0.47
PTPRF-214ENST00000496043 IL2P60568 153 aa12.12□□□□□ -0.47
PTPRF-214ENST00000496043 FAM53BQ14153 422 aa12.12□□□□□ -0.47
PTPRF-214ENST00000496043 PRR30Q53SZ7 412 aaPredicted RBP12.12□□□□□ -0.47
PTPRF-214ENST00000496043 TEDDM1Q5T9Z0 273 aa12.12□□□□□ -0.47
PTPRF-214ENST00000496043 Q6ZS92 163 aa12.12□□□□□ -0.47
PTPRF-214ENST00000496043 NDUFAF7Q7L592 441 aa12.12□□□□□ -0.47
PTPRF-214ENST00000496043 GALNT7Q86SF2 657 aa12.12□□□□□ -0.47
PTPRF-214ENST00000496043 CREG2Q8IUH2 290 aa12.12□□□□□ -0.47
PTPRF-214ENST00000496043 PLD3Q8IV08 490 aa12.12□□□□□ -0.47
PTPRF-214ENST00000496043 CNTN4Q8IWV2 1026 aa12.12□□□□□ -0.47
PTPRF-214ENST00000496043 DNAJB14Q8TBM8 379 aa12.12□□□□□ -0.47
PTPRF-214ENST00000496043 LRRC39Q96DD0 335 aa12.12□□□□□ -0.47
PTPRF-214ENST00000496043 THAP11Q96EK4 314 aa12.12□□□□□ -0.47
PTPRF-214ENST00000496043 C19orf60Q96EN9 201 aa12.12□□□□□ -0.47
PTPRF-214ENST00000496043 CERS2Q96G23 380 aa12.12□□□□□ -0.47
PTPRF-214ENST00000496043 THOC3Q96J01 351 aaKnown RBP12.12□□□□□ -0.47
PTPRF-214ENST00000496043 CAPZA3Q96KX2 299 aa12.12□□□□□ -0.47
PTPRF-214ENST00000496043 LMF1Q96S06 567 aa12.12□□□□□ -0.47
PTPRF-214ENST00000496043 TRIM54Q9BYV2 358 aa12.12□□□□□ -0.47
PTPRF-214ENST00000496043 TGIF2Q9GZN2 237 aa12.12□□□□□ -0.47
PTPRF-214ENST00000496043 ZBTB20Q9HC78 741 aaPredicted RBP12.12□□□□□ -0.47
PTPRF-214ENST00000496043 LRRC4CQ9HCJ2 640 aa12.12□□□□□ -0.47
PTPRF-214ENST00000496043 MKKSQ9NPJ1 570 aaPredicted RBP12.12□□□□□ -0.47
PTPRF-214ENST00000496043 C14orf105Q9NVL8 296 aa12.12□□□□□ -0.47
PTPRF-214ENST00000496043 CUEDC1Q9NWM3 386 aaPredicted RBP12.12□□□□□ -0.47
PTPRF-214ENST00000496043 ADAMTS6Q9UKP5 1117 aa12.12□□□□□ -0.47
PTPRF-214ENST00000496043 VWA7Q9Y334 891 aa12.12□□□□□ -0.47
PTPRF-214ENST00000496043 COPG1Q9Y678 874 aaKnown RBP12.12□□□□□ -0.47
PTPRF-214ENST00000496043 SAR1BQ9Y6B6 198 aa12.12□□□□□ -0.47
PTPRF-214ENST00000496043 A0A0A6YYC8 382 aaPredicted RBP12.11□□□□□ -0.47
PTPRF-214ENST00000496043 PABPN1LA6NDY0 278 aaKnown RBP12.11□□□□□ -0.47
PTPRF-214ENST00000496043 IDSB3KWA1 339 aa12.11□□□□□ -0.47
PTPRF-214ENST00000496043 I3L1I5 382 aaPredicted RBP12.11□□□□□ -0.47
PTPRF-214ENST00000496043 PCDH17O14917 1159 aa12.11□□□□□ -0.47
PTPRF-214ENST00000496043 FOXS1O43638 330 aa12.11□□□□□ -0.47
PTPRF-214ENST00000496043 AGFG2O95081 481 aa12.11□□□□□ -0.47
PTPRF-214ENST00000496043 CCND1P24385 295 aa12.11□□□□□ -0.47
PTPRF-214ENST00000496043 ELK3P41970 407 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms