RNA–Protein interactions for RNA: ENST00000495457.1

RPRD1B-206, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 4

Gene RPRD1B, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-206ENST00000495457 UQCRFS1P47985 274 aa13.57□□□□□ -0.24
RPRD1B-206ENST00000495457 RGS4P49798 205 aa13.57□□□□□ -0.24
RPRD1B-206ENST00000495457 SOX8P57073 446 aa13.57□□□□□ -0.24
RPRD1B-206ENST00000495457 KLC1Q07866 573 aa13.57□□□□□ -0.24
RPRD1B-206ENST00000495457 SRSF1Q07955 248 aaKnown RBP eCLIP13.57□□□□□ -0.24
RPRD1B-206ENST00000495457 RBBP7Q16576 425 aa13.57□□□□□ -0.24
RPRD1B-206ENST00000495457 HIF1AQ16665 826 aa13.57□□□□□ -0.24
RPRD1B-206ENST00000495457 PHKG1Q16816 387 aa13.57□□□□□ -0.24
RPRD1B-206ENST00000495457 PRMT9Q6P2P2 845 aa13.57□□□□□ -0.24
RPRD1B-206ENST00000495457 KIAA0408Q6ZU52 694 aa13.57□□□□□ -0.24
RPRD1B-206ENST00000495457 ATCAYQ86WG3 371 aa13.57□□□□□ -0.24
RPRD1B-206ENST00000495457 ANKMY2Q8IV38 441 aa13.57□□□□□ -0.24
RPRD1B-206ENST00000495457 MYO1HQ8N1T3 1032 aa13.57□□□□□ -0.24
RPRD1B-206ENST00000495457 ARHGEF39Q8N4T4 335 aa13.57□□□□□ -0.24
RPRD1B-206ENST00000495457 ANP32BQ92688 251 aaKnown RBP13.57□□□□□ -0.24
RPRD1B-206ENST00000495457 NACC2Q96BF6 587 aa13.57□□□□□ -0.24
RPRD1B-206ENST00000495457 MIEF2Q96C03 454 aa13.57□□□□□ -0.24
RPRD1B-206ENST00000495457 LINGO1Q96FE5 620 aa13.57□□□□□ -0.24
RPRD1B-206ENST00000495457 RUNDC3BQ96NL0 473 aa13.57□□□□□ -0.24
RPRD1B-206ENST00000495457 OLFM1Q99784 485 aa13.57□□□□□ -0.24
RPRD1B-206ENST00000495457 CRB3Q9BUF7 120 aa13.57□□□□□ -0.24
RPRD1B-206ENST00000495457 ATG10Q9H0Y0 220 aa13.57□□□□□ -0.24
RPRD1B-206ENST00000495457 CCDC177Q9NQR7 707 aaPredicted RBP13.57□□□□□ -0.24
RPRD1B-206ENST00000495457 C5AR2Q9P296 337 aa13.57□□□□□ -0.24
RPRD1B-206ENST00000495457 ZNF282Q9UDV7 671 aaPredicted RBP13.57□□□□□ -0.24
RPRD1B-206ENST00000495457 SH2B3Q9UQQ2 575 aa13.57□□□□□ -0.24
RPRD1B-206ENST00000495457 MAP4K5Q9Y4K4 846 aa13.57□□□□□ -0.24
RPRD1B-206ENST00000495457 FLNCQ14315 2725 aa13.56□□□□□ -0.24
RPRD1B-206ENST00000495457 FOXS1O43638 330 aa13.56□□□□□ -0.24
RPRD1B-206ENST00000495457 TSPAN12O95859 305 aa13.56□□□□□ -0.24
RPRD1B-206ENST00000495457 C8GP07360 202 aa13.56□□□□□ -0.24
RPRD1B-206ENST00000495457 FBLP22087 321 aaKnown RBP13.56□□□□□ -0.24
RPRD1B-206ENST00000495457 EMP3P54852 163 aa13.56□□□□□ -0.24
RPRD1B-206ENST00000495457 OCA2Q04671 838 aa13.56□□□□□ -0.24
RPRD1B-206ENST00000495457 AIMP2Q13155 320 aaKnown RBP13.56□□□□□ -0.24
RPRD1B-206ENST00000495457 UBAP2LQ14157 1087 aaKnown RBP13.56□□□□□ -0.24
RPRD1B-206ENST00000495457 FASTKD3Q14CZ7 662 aaKnown RBP13.56□□□□□ -0.24
RPRD1B-206ENST00000495457 INPP5JQ15735 1006 aaPredicted RBP13.56□□□□□ -0.24
RPRD1B-206ENST00000495457 ZXDCQ2QGD7 858 aaPredicted RBP13.56□□□□□ -0.24
RPRD1B-206ENST00000495457 HECTD2Q5U5R9 776 aa13.56□□□□□ -0.24
RPRD1B-206ENST00000495457 PRAMEF13Q5VWM6 474 aa13.56□□□□□ -0.24
RPRD1B-206ENST00000495457 STEAP4Q687X5 459 aa13.56□□□□□ -0.24
RPRD1B-206ENST00000495457 LRRC8EQ6NSJ5 796 aa13.56□□□□□ -0.24
RPRD1B-206ENST00000495457 AGTRAPQ6RW13 159 aa13.56□□□□□ -0.24
RPRD1B-206ENST00000495457 GALNT7Q86SF2 657 aa13.56□□□□□ -0.24
RPRD1B-206ENST00000495457 LAPTM4BQ86VI4 370 aa13.56□□□□□ -0.24
RPRD1B-206ENST00000495457 HPS6Q86YV9 775 aa13.56□□□□□ -0.24
RPRD1B-206ENST00000495457 PARP9Q8IXQ6 854 aa13.56□□□□□ -0.24
RPRD1B-206ENST00000495457 EFCAB3Q8N7B9 438 aa13.56□□□□□ -0.24
RPRD1B-206ENST00000495457 GPATCH11Q8N954 259 aa13.56□□□□□ -0.24
RPRD1B-206ENST00000495457 OR11G2Q8NGC1 345 aa13.56□□□□□ -0.24
RPRD1B-206ENST00000495457 GABPB2Q8TAK5 448 aaPredicted RBP13.56□□□□□ -0.24
RPRD1B-206ENST00000495457 MCOLN3Q8TDD5 553 aa13.56□□□□□ -0.24
RPRD1B-206ENST00000495457 RERGQ96A58 199 aaPredicted RBP13.56□□□□□ -0.24
RPRD1B-206ENST00000495457 PNPLA2Q96AD5 504 aa13.56□□□□□ -0.24
RPRD1B-206ENST00000495457 ALKBH8Q96BT7 664 aaKnown RBP13.56□□□□□ -0.24
RPRD1B-206ENST00000495457 C8orf44Q96CB5 159 aa13.56□□□□□ -0.24
RPRD1B-206ENST00000495457 CCDC138Q96M89 665 aa13.56□□□□□ -0.24
RPRD1B-206ENST00000495457 KRT12Q99456 494 aa13.56□□□□□ -0.24
RPRD1B-206ENST00000495457 YIPF2Q9BWQ6 316 aa13.56□□□□□ -0.24
RPRD1B-206ENST00000495457 PARVBQ9HBI1 364 aa13.56□□□□□ -0.24
RPRD1B-206ENST00000495457 SLAMF7Q9NQ25 335 aa13.56□□□□□ -0.24
RPRD1B-206ENST00000495457 SEMA3GQ9NS98 782 aa13.56□□□□□ -0.24
RPRD1B-206ENST00000495457 UTP6Q9NYH9 597 aaKnown RBP13.56□□□□□ -0.24
RPRD1B-206ENST00000495457 TRPC4Q9UBN4 977 aa13.56□□□□□ -0.24
RPRD1B-206ENST00000495457 C3orf18Q9UK00 162 aa13.56□□□□□ -0.24
RPRD1B-206ENST00000495457 MRPS2Q9Y399 296 aaKnown RBP13.56□□□□□ -0.24
RPRD1B-206ENST00000495457 CCDC88CQ9P219 2028 aa13.56□□□□□ -0.24
RPRD1B-206ENST00000495457 IGLV3-12A0A075B6K2 115 aa13.55□□□□□ -0.24
RPRD1B-206ENST00000495457 A0A0A6YYC8 382 aaPredicted RBP13.55□□□□□ -0.24
RPRD1B-206ENST00000495457 CYSRT1A8MQ03 144 aa13.55□□□□□ -0.24
RPRD1B-206ENST00000495457 CCDC188H7C350 402 aa13.55□□□□□ -0.24
RPRD1B-206ENST00000495457 I3L1I5 382 aaPredicted RBP13.55□□□□□ -0.24
RPRD1B-206ENST00000495457 SLC16A5O15375 505 aa13.55□□□□□ -0.24
RPRD1B-206ENST00000495457 VPS4BO75351 444 aa13.55□□□□□ -0.24
RPRD1B-206ENST00000495457 ALPPP05187 535 aa13.55□□□□□ -0.24
RPRD1B-206ENST00000495457 FDXRP22570 491 aa13.55□□□□□ -0.24
RPRD1B-206ENST00000495457 GNLYP22749 145 aa13.55□□□□□ -0.24
RPRD1B-206ENST00000495457 PAFAH1B1P43034 410 aa13.55□□□□□ -0.24
RPRD1B-206ENST00000495457 ARL4CP56559 192 aa13.55□□□□□ -0.24
RPRD1B-206ENST00000495457 RELAQ04206 551 aa13.55□□□□□ -0.24
RPRD1B-206ENST00000495457 Q0VFX4 171 aa13.55□□□□□ -0.24
RPRD1B-206ENST00000495457 PDIA2Q13087 525 aaKnown RBP13.55□□□□□ -0.24
RPRD1B-206ENST00000495457 SP140Q13342 867 aa13.55□□□□□ -0.24
RPRD1B-206ENST00000495457 PDAP1Q13442 181 aaKnown RBP13.55□□□□□ -0.24
RPRD1B-206ENST00000495457 NAE1Q13564 534 aa13.55□□□□□ -0.24
RPRD1B-206ENST00000495457 DSG2Q14126 1118 aa13.55□□□□□ -0.24
RPRD1B-206ENST00000495457 SYT16Q17RD7 645 aa13.55□□□□□ -0.24
RPRD1B-206ENST00000495457 TUBB8Q3ZCM7 444 aa13.55□□□□□ -0.24
RPRD1B-206ENST00000495457 PLEKHN1Q494U1 663 aaPredicted RBP13.55□□□□□ -0.24
RPRD1B-206ENST00000495457 GARNL3Q5VVW2 1013 aa13.55□□□□□ -0.24
RPRD1B-206ENST00000495457 VN1R4Q7Z5H5 301 aa13.55□□□□□ -0.24
RPRD1B-206ENST00000495457 PALM2Q8IXS6 379 aa13.55□□□□□ -0.24
RPRD1B-206ENST00000495457 SHISA5Q8N114 240 aa13.55□□□□□ -0.24
RPRD1B-206ENST00000495457 AMER3Q8N944 861 aa13.55□□□□□ -0.24
RPRD1B-206ENST00000495457 FBXO36Q8NEA4 188 aa13.55□□□□□ -0.24
RPRD1B-206ENST00000495457 LRRC39Q96DD0 335 aa13.55□□□□□ -0.24
RPRD1B-206ENST00000495457 MVB12AQ96EY5 273 aa13.55□□□□□ -0.24
RPRD1B-206ENST00000495457 MMABQ96EY8 250 aaPredicted RBP13.55□□□□□ -0.24
RPRD1B-206ENST00000495457 SNF8Q96H20 258 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms