RNA–Protein interactions for RNA: ENST00000494795.1

SAMM50-206, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 3,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-206ENST00000494795 THAP10Q9P2Z0 257 aaPredicted RBP10.03□□□□□ -0.8
SAMM50-206ENST00000494795 ADGRE2Q9UHX3 823 aa10.03□□□□□ -0.8
SAMM50-206ENST00000494795 ANAPC2Q9UJX6 822 aa10.03□□□□□ -0.8
SAMM50-206ENST00000494795 INVSQ9Y283 1065 aa10.03□□□□□ -0.8
SAMM50-206ENST00000494795 FEZF1A0PJY2 475 aa10.03□□□□□ -0.8
SAMM50-206ENST00000494795 WASHC1A8K0Z3 465 aa10.03□□□□□ -0.8
SAMM50-206ENST00000494795 GABRR3A8MPY1 467 aa10.03□□□□□ -0.8
SAMM50-206ENST00000494795 K7EQS6 105 aa10.03□□□□□ -0.8
SAMM50-206ENST00000494795 RTCAO00442 366 aaKnown RBP10.03□□□□□ -0.8
SAMM50-206ENST00000494795 B4GAT1O43505 415 aa10.03□□□□□ -0.8
SAMM50-206ENST00000494795 ABCB1P08183 1280 aaPredicted RBP10.03□□□□□ -0.8
SAMM50-206ENST00000494795 ACPPP15309 386 aa10.03□□□□□ -0.8
SAMM50-206ENST00000494795 ACADLP28330 430 aa10.03□□□□□ -0.8
SAMM50-206ENST00000494795 S100A3P33764 101 aa10.03□□□□□ -0.8
SAMM50-206ENST00000494795 SP140Q13342 867 aa10.03□□□□□ -0.8
SAMM50-206ENST00000494795 PLCL1Q15111 1095 aa10.03□□□□□ -0.8
SAMM50-206ENST00000494795 PDGFRLQ15198 375 aa10.03□□□□□ -0.8
SAMM50-206ENST00000494795 GGTA1PQ4G0N0 100 aa10.03□□□□□ -0.8
SAMM50-206ENST00000494795 WASH2PQ6VEQ5 465 aa10.03□□□□□ -0.8
SAMM50-206ENST00000494795 RTL10Q7L3V2 364 aa10.03□□□□□ -0.8
SAMM50-206ENST00000494795 FAM124AQ86V42 546 aa10.03□□□□□ -0.8
SAMM50-206ENST00000494795 SYT12Q8IV01 421 aa10.03□□□□□ -0.8
SAMM50-206ENST00000494795 ANKFN1Q8N957 763 aa10.03□□□□□ -0.8
SAMM50-206ENST00000494795 FAM47BQ8NA70 645 aa10.03□□□□□ -0.8
SAMM50-206ENST00000494795 C11orf24Q96F05 449 aaPredicted RBP10.03□□□□□ -0.8
SAMM50-206ENST00000494795 NSMCE2Q96MF7 247 aa10.03□□□□□ -0.8
SAMM50-206ENST00000494795 UCN2Q96RP3 112 aa10.03□□□□□ -0.8
SAMM50-206ENST00000494795 ABCG4Q9H172 646 aa10.03□□□□□ -0.8
SAMM50-206ENST00000494795 XKR8Q9H6D3 395 aa10.03□□□□□ -0.8
SAMM50-206ENST00000494795 OLAHQ9NV23 265 aa10.03□□□□□ -0.8
SAMM50-206ENST00000494795 CUEDC1Q9NWM3 386 aaPredicted RBP10.03□□□□□ -0.8
SAMM50-206ENST00000494795 VPS29Q9UBQ0 182 aa10.03□□□□□ -0.8
SAMM50-206ENST00000494795 CDH7Q9ULB5 785 aa10.03□□□□□ -0.8
SAMM50-206ENST00000494795 ASF1AQ9Y294 204 aa10.03□□□□□ -0.8
SAMM50-206ENST00000494795 PCDHB3Q9Y5E6 796 aa10.03□□□□□ -0.8
SAMM50-206ENST00000494795 RNF103-CHMP3A0A140T963 221 aa10.03□□□□□ -0.8
SAMM50-206ENST00000494795 C2orf72A6NCS6 295 aa10.03□□□□□ -0.8
SAMM50-206ENST00000494795 PABPN1LA6NDY0 278 aaKnown RBP10.03□□□□□ -0.8
SAMM50-206ENST00000494795 KIF1CO43896 1103 aaKnown RBP10.03□□□□□ -0.8
SAMM50-206ENST00000494795 NOBOXO60393 691 aa10.03□□□□□ -0.8
SAMM50-206ENST00000494795 TBX6O95947 436 aaPredicted RBP10.03□□□□□ -0.8
SAMM50-206ENST00000494795 CATP04040 527 aaKnown RBP10.03□□□□□ -0.8
SAMM50-206ENST00000494795 FUT4P22083 530 aa10.03□□□□□ -0.8
SAMM50-206ENST00000494795 FASP25445 335 aa10.03□□□□□ -0.8
SAMM50-206ENST00000494795 SLBPQ14493 270 aaKnown RBP eCLIP10.03□□□□□ -0.8
SAMM50-206ENST00000494795 FXNQ16595 210 aa10.03□□□□□ -0.8
SAMM50-206ENST00000494795 PPP4R4Q6NUP7 873 aa10.03□□□□□ -0.8
SAMM50-206ENST00000494795 ZNF557Q8N988 423 aaPredicted RBP10.03□□□□□ -0.8
SAMM50-206ENST00000494795 CXorf40AQ8TE69 158 aa10.03□□□□□ -0.8
SAMM50-206ENST00000494795 CMTM7Q96FZ5 175 aa10.03□□□□□ -0.8
SAMM50-206ENST00000494795 CCDC138Q96M89 665 aa10.03□□□□□ -0.8
SAMM50-206ENST00000494795 ZBTB18Q99592 522 aa10.03□□□□□ -0.8
SAMM50-206ENST00000494795 TMUB1Q9BVT8 246 aa10.03□□□□□ -0.8
SAMM50-206ENST00000494795 OR52A5Q9H2C5 316 aa10.03□□□□□ -0.8
SAMM50-206ENST00000494795 SMURF2Q9HAU4 748 aa10.03□□□□□ -0.8
SAMM50-206ENST00000494795 PFDN4Q9NQP4 134 aa10.03□□□□□ -0.8
SAMM50-206ENST00000494795 DYRK4Q9NR20 520 aa10.03□□□□□ -0.8
SAMM50-206ENST00000494795 SPATA6Q9NWH7 488 aaPredicted RBP10.03□□□□□ -0.8
SAMM50-206ENST00000494795 THG1LQ9NWX6 298 aaKnown RBP10.03□□□□□ -0.8
SAMM50-206ENST00000494795 VNN3Q9NY84 501 aa10.03□□□□□ -0.8
SAMM50-206ENST00000494795 C5AR2Q9P296 337 aa10.03□□□□□ -0.8
SAMM50-206ENST00000494795 RAB26Q9ULW5 256 aa10.03□□□□□ -0.8
SAMM50-206ENST00000494795 SLC16A5O15375 505 aa10.02□□□□□ -0.81
SAMM50-206ENST00000494795 SNRNP200O75643 2136 aaKnown RBP10.02□□□□□ -0.81
SAMM50-206ENST00000494795 NTRK1P04629 796 aa10.02□□□□□ -0.81
SAMM50-206ENST00000494795 IL6P05231 212 aa10.02□□□□□ -0.81
SAMM50-206ENST00000494795 ZNF23P17027 643 aa10.02□□□□□ -0.81
SAMM50-206ENST00000494795 COL9A1P20849 921 aa10.02□□□□□ -0.81
SAMM50-206ENST00000494795 AQP1P29972 269 aa10.02□□□□□ -0.81
SAMM50-206ENST00000494795 PTGER1P34995 402 aa10.02□□□□□ -0.81
SAMM50-206ENST00000494795 CDK3Q00526 305 aa10.02□□□□□ -0.81
SAMM50-206ENST00000494795 FOXD4Q12950 439 aaPredicted RBP10.02□□□□□ -0.81
SAMM50-206ENST00000494795 GAB1Q13480 694 aa10.02□□□□□ -0.81
SAMM50-206ENST00000494795 PNCKQ6P2M8 343 aa10.02□□□□□ -0.81
SAMM50-206ENST00000494795 VN1R5Q7Z5H4 357 aa10.02□□□□□ -0.81
SAMM50-206ENST00000494795 CARM1Q86X55 608 aa10.02□□□□□ -0.81
SAMM50-206ENST00000494795 HDDC3Q8N4P3 179 aa10.02□□□□□ -0.81
SAMM50-206ENST00000494795 SGCDQ92629 289 aa10.02□□□□□ -0.81
SAMM50-206ENST00000494795 CIDECQ96AQ7 238 aaPredicted RBP10.02□□□□□ -0.81
SAMM50-206ENST00000494795 CPPED1Q9BRF8 314 aaPredicted RBP10.02□□□□□ -0.81
SAMM50-206ENST00000494795 MTIF3Q9H2K0 278 aaKnown RBP10.02□□□□□ -0.81
SAMM50-206ENST00000494795 VCXQ9H320 206 aa10.02□□□□□ -0.81
SAMM50-206ENST00000494795 NPDC1Q9NQX5 325 aaPredicted RBP10.02□□□□□ -0.81
SAMM50-206ENST00000494795 NFKBIL1Q9UBC1 381 aaPredicted RBP10.02□□□□□ -0.81
SAMM50-206ENST00000494795 A0A0G2JN53 185 aa10.02□□□□□ -0.81
SAMM50-206ENST00000494795 H0Y8X5 98 aa10.02□□□□□ -0.81
SAMM50-206ENST00000494795 EIF3FO00303 357 aaPredicted RBP10.02□□□□□ -0.81
SAMM50-206ENST00000494795 NARSO43776 548 aaKnown RBP10.02□□□□□ -0.81
SAMM50-206ENST00000494795 CDH1P12830 882 aa10.02□□□□□ -0.81
SAMM50-206ENST00000494795 IL10P22301 178 aa10.02□□□□□ -0.81
SAMM50-206ENST00000494795 POLR2IP36954 125 aaKnown RBP10.02□□□□□ -0.81
SAMM50-206ENST00000494795 CST6Q15828 149 aa10.02□□□□□ -0.81
SAMM50-206ENST00000494795 MPEG1Q2M385 716 aa10.02□□□□□ -0.81
SAMM50-206ENST00000494795 CYP27C1Q4G0S4 372 aa10.02□□□□□ -0.81
SAMM50-206ENST00000494795 THEMIS2Q5TEJ8 643 aa10.02□□□□□ -0.81
SAMM50-206ENST00000494795 ZNF621Q6ZSS3 439 aa10.02□□□□□ -0.81
SAMM50-206ENST00000494795 NEK10Q6ZWH5 1172 aa10.02□□□□□ -0.81
SAMM50-206ENST00000494795 CYGBQ8WWM9 190 aa10.02□□□□□ -0.81
SAMM50-206ENST00000494795 NCLNQ969V3 563 aa10.02□□□□□ -0.81
SAMM50-206ENST00000494795 TIFAQ96CG3 184 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms