RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 SLC16A8O95907 504 aa12.76□□□□□ -0.37
CTDSP1-212ENST00000494067 HPP00738 406 aa12.76□□□□□ -0.37
CTDSP1-212ENST00000494067 ZGLP1P0C6A0 271 aa12.76□□□□□ -0.37
CTDSP1-212ENST00000494067 ACPPP15309 386 aa12.76□□□□□ -0.37
CTDSP1-212ENST00000494067 EZRP15311 586 aaKnown RBP12.76□□□□□ -0.37
CTDSP1-212ENST00000494067 IVDP26440 423 aa12.76□□□□□ -0.37
CTDSP1-212ENST00000494067 GABRB3P28472 473 aa12.76□□□□□ -0.37
CTDSP1-212ENST00000494067 ARF3P61204 181 aaPredicted RBP12.76□□□□□ -0.37
CTDSP1-212ENST00000494067 PRDX1Q06830 199 aaKnown RBP12.76□□□□□ -0.37
CTDSP1-212ENST00000494067 KLC1Q07866 573 aa12.76□□□□□ -0.37
CTDSP1-212ENST00000494067 Q0VFX4 171 aa12.76□□□□□ -0.37
CTDSP1-212ENST00000494067 MRPL49Q13405 166 aaKnown RBP12.76□□□□□ -0.37
CTDSP1-212ENST00000494067 PTK6Q13882 451 aa12.76□□□□□ -0.37
CTDSP1-212ENST00000494067 NR6A1Q15406 480 aa12.76□□□□□ -0.37
CTDSP1-212ENST00000494067 PRTGQ2VWP7 1150 aa12.76□□□□□ -0.37
CTDSP1-212ENST00000494067 C4orf17Q53FE4 359 aa12.76□□□□□ -0.37
CTDSP1-212ENST00000494067 GARNL3Q5VVW2 1013 aa12.76□□□□□ -0.37
CTDSP1-212ENST00000494067 ICE2Q659A1 982 aa12.76□□□□□ -0.37
CTDSP1-212ENST00000494067 ZNF425Q6IV72 752 aa12.76□□□□□ -0.37
CTDSP1-212ENST00000494067 LRRC8EQ6NSJ5 796 aa12.76□□□□□ -0.37
CTDSP1-212ENST00000494067 KIRREL2Q6UWL6 708 aa12.76□□□□□ -0.37
CTDSP1-212ENST00000494067 Q6ZS92 163 aa12.76□□□□□ -0.37
CTDSP1-212ENST00000494067 PIWIL4Q7Z3Z4 852 aaKnown RBP12.76□□□□□ -0.37
CTDSP1-212ENST00000494067 PAQR7Q86WK9 346 aa12.76□□□□□ -0.37
CTDSP1-212ENST00000494067 CPNE9Q8IYJ1 553 aa12.76□□□□□ -0.37
CTDSP1-212ENST00000494067 CSNK1A1LQ8N752 337 aa12.76□□□□□ -0.37
CTDSP1-212ENST00000494067 FBXO15Q8NCQ5 510 aaPredicted RBP12.76□□□□□ -0.37
CTDSP1-212ENST00000494067 ACTRT1Q8TDG2 376 aa12.76□□□□□ -0.37
CTDSP1-212ENST00000494067 PPP4R1Q8TF05 950 aa12.76□□□□□ -0.37
CTDSP1-212ENST00000494067 THOC3Q96J01 351 aaKnown RBP12.76□□□□□ -0.37
CTDSP1-212ENST00000494067 GPR21Q99679 349 aa12.76□□□□□ -0.37
CTDSP1-212ENST00000494067 FAM167BQ9BTA0 163 aa12.76□□□□□ -0.37
CTDSP1-212ENST00000494067 DDX47Q9H0S4 455 aaKnown RBP12.76□□□□□ -0.37
CTDSP1-212ENST00000494067 C14orf105Q9NVL8 296 aa12.76□□□□□ -0.37
CTDSP1-212ENST00000494067 ASF1BQ9NVP2 202 aa12.76□□□□□ -0.37
CTDSP1-212ENST00000494067 TRMT1Q9NXH9 659 aaKnown RBP12.76□□□□□ -0.37
CTDSP1-212ENST00000494067 TRPC4Q9UBN4 977 aa12.76□□□□□ -0.37
CTDSP1-212ENST00000494067 C3orf18Q9UK00 162 aa12.76□□□□□ -0.37
CTDSP1-212ENST00000494067 ADAMTS6Q9UKP5 1117 aa12.76□□□□□ -0.37
CTDSP1-212ENST00000494067 SNX12Q9UMY4 172 aa12.76□□□□□ -0.37
CTDSP1-212ENST00000494067 SH2B3Q9UQQ2 575 aa12.76□□□□□ -0.37
CTDSP1-212ENST00000494067 USP9XQ93008 2570 aaPredicted RBP12.76□□□□□ -0.37
CTDSP1-212ENST00000494067 E7ENX8 843 aa12.75□□□□□ -0.37
CTDSP1-212ENST00000494067 SMAPO00193 183 aa12.75□□□□□ -0.37
CTDSP1-212ENST00000494067 P2RX6O15547 441 aa12.75□□□□□ -0.37
CTDSP1-212ENST00000494067 STATHP02808 62 aa12.75□□□□□ -0.37
CTDSP1-212ENST00000494067 HRH2P25021 359 aa12.75□□□□□ -0.37
CTDSP1-212ENST00000494067 EMP2P54851 167 aa12.75□□□□□ -0.37
CTDSP1-212ENST00000494067 AP2B1P63010 937 aa12.75□□□□□ -0.37
CTDSP1-212ENST00000494067 TAP2Q03519 686 aa12.75□□□□□ -0.37
CTDSP1-212ENST00000494067 RELAQ04206 551 aa12.75□□□□□ -0.37
CTDSP1-212ENST00000494067 DHX9Q08211 1270 aaKnown RBP12.75□□□□□ -0.37
CTDSP1-212ENST00000494067 PPP1R7Q15435 360 aa12.75□□□□□ -0.37
CTDSP1-212ENST00000494067 ZXDCQ2QGD7 858 aaPredicted RBP12.75□□□□□ -0.37
CTDSP1-212ENST00000494067 HKDC1Q2TB90 917 aa12.75□□□□□ -0.37
CTDSP1-212ENST00000494067 HSP90AA5PQ58FG0 334 aa12.75□□□□□ -0.37
CTDSP1-212ENST00000494067 RBM20Q5T481 1227 aaKnown RBP12.75□□□□□ -0.37
CTDSP1-212ENST00000494067 ISLR2Q6UXK2 745 aa12.75□□□□□ -0.37
CTDSP1-212ENST00000494067 MBOAT1Q6ZNC8 495 aa12.75□□□□□ -0.37
CTDSP1-212ENST00000494067 PCGF5Q86SE9 256 aa12.75□□□□□ -0.37
CTDSP1-212ENST00000494067 LAPTM4BQ86VI4 370 aa12.75□□□□□ -0.37
CTDSP1-212ENST00000494067 PLD3Q8IV08 490 aa12.75□□□□□ -0.37
CTDSP1-212ENST00000494067 PPIL6Q8IXY8 311 aa12.75□□□□□ -0.37
CTDSP1-212ENST00000494067 PRSS58Q8IYP2 241 aa12.75□□□□□ -0.37
CTDSP1-212ENST00000494067 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.75□□□□□ -0.37
CTDSP1-212ENST00000494067 OR11G2Q8NGC1 345 aa12.75□□□□□ -0.37
CTDSP1-212ENST00000494067 MCOLN3Q8TDD5 553 aa12.75□□□□□ -0.37
CTDSP1-212ENST00000494067 ASB11Q8WXH4 323 aa12.75□□□□□ -0.37
CTDSP1-212ENST00000494067 MMABQ96EY8 250 aaPredicted RBP12.75□□□□□ -0.37
CTDSP1-212ENST00000494067 CNDP1Q96KN2 507 aa12.75□□□□□ -0.37
CTDSP1-212ENST00000494067 NDNQ99608 321 aa12.75□□□□□ -0.37
CTDSP1-212ENST00000494067 IARS2Q9NSE4 1012 aaKnown RBP12.75□□□□□ -0.37
CTDSP1-212ENST00000494067 PLEKHB1Q9UF11 243 aaPredicted RBP12.75□□□□□ -0.37
CTDSP1-212ENST00000494067 PCYOX1Q9UHG3 505 aa12.75□□□□□ -0.37
CTDSP1-212ENST00000494067 FBXO5Q9UKT4 447 aa12.75□□□□□ -0.37
CTDSP1-212ENST00000494067 RUVBL1Q9Y265 456 aaKnown RBP12.75□□□□□ -0.37
CTDSP1-212ENST00000494067 NTNG1Q9Y2I2 539 aa12.75□□□□□ -0.37
CTDSP1-212ENST00000494067 DHRS7Q9Y394 339 aa12.75□□□□□ -0.37
CTDSP1-212ENST00000494067 MRPS2Q9Y399 296 aaKnown RBP12.75□□□□□ -0.37
CTDSP1-212ENST00000494067 NSG1A0A0A6YYJ2 146 aa12.74□□□□□ -0.37
CTDSP1-212ENST00000494067 ANKUB1A6NFN9 424 aa12.74□□□□□ -0.37
CTDSP1-212ENST00000494067 GFYI3L273 518 aa12.74□□□□□ -0.37
CTDSP1-212ENST00000494067 EIF3FO00303 357 aaPredicted RBP12.74□□□□□ -0.37
CTDSP1-212ENST00000494067 TP73O15350 636 aa12.74□□□□□ -0.37
CTDSP1-212ENST00000494067 ZSCAN12O43309 604 aa12.74□□□□□ -0.37
CTDSP1-212ENST00000494067 HEXBP07686 556 aa12.74□□□□□ -0.37
CTDSP1-212ENST00000494067 FDXRP22570 491 aa12.74□□□□□ -0.37
CTDSP1-212ENST00000494067 IMPA1P29218 277 aa12.74□□□□□ -0.37
CTDSP1-212ENST00000494067 SKIV2L2P42285 1042 aaKnown RBP12.74□□□□□ -0.37
CTDSP1-212ENST00000494067 AVPR1BP47901 424 aa12.74□□□□□ -0.37
CTDSP1-212ENST00000494067 FNTAP49354 379 aa12.74□□□□□ -0.37
CTDSP1-212ENST00000494067 RGS4P49798 205 aa12.74□□□□□ -0.37
CTDSP1-212ENST00000494067 CDC16Q13042 620 aa12.74□□□□□ -0.37
CTDSP1-212ENST00000494067 DSG2Q14126 1118 aa12.74□□□□□ -0.37
CTDSP1-212ENST00000494067 CRYMQ14894 314 aa12.74□□□□□ -0.37
CTDSP1-212ENST00000494067 TLR1Q15399 786 aa12.74□□□□□ -0.37
CTDSP1-212ENST00000494067 VWA2Q5GFL6 755 aa12.74□□□□□ -0.37
CTDSP1-212ENST00000494067 CRB2Q5IJ48 1285 aa12.74□□□□□ -0.37
CTDSP1-212ENST00000494067 HIST2H2BCQ6DN03 193 aa12.74□□□□□ -0.37
CTDSP1-212ENST00000494067 UBE2R2Q712K3 238 aaPredicted RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms