RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 OR2T29Q8NH02 315 aa9.34□□□□□ -0.91
NPHP3-209ENST00000493732 NUDT8Q8WV74 236 aa9.34□□□□□ -0.91
NPHP3-209ENST00000493732 UBE2E3Q969T4 207 aa9.34□□□□□ -0.91
NPHP3-209ENST00000493732 THAP11Q96EK4 314 aa9.34□□□□□ -0.91
NPHP3-209ENST00000493732 EFCAB11Q9BUY7 163 aa9.34□□□□□ -0.91
NPHP3-209ENST00000493732 DUSP26Q9BV47 211 aa9.34□□□□□ -0.91
NPHP3-209ENST00000493732 EHD1Q9H4M9 534 aa9.34□□□□□ -0.91
NPHP3-209ENST00000493732 CARS2Q9HA77 564 aaKnown RBP9.34□□□□□ -0.91
NPHP3-209ENST00000493732 ITM2CQ9NQX7 267 aa9.34□□□□□ -0.91
NPHP3-209ENST00000493732 TLR9Q9NR96 1032 aa9.34□□□□□ -0.91
NPHP3-209ENST00000493732 HCFC1R1Q9NWW0 138 aa9.34□□□□□ -0.91
NPHP3-209ENST00000493732 ETAA1Q9NY74 926 aa9.34□□□□□ -0.91
NPHP3-209ENST00000493732 ZNF282Q9UDV7 671 aaPredicted RBP9.34□□□□□ -0.91
NPHP3-209ENST00000493732 SLC27A6Q9Y2P4 619 aa9.34□□□□□ -0.91
NPHP3-209ENST00000493732 HTTP42858 3142 aa9.34□□□□□ -0.91
NPHP3-209ENST00000493732 C17orf113A0A1B0GUU1 675 aa9.33□□□□□ -0.92
NPHP3-209ENST00000493732 FADS2P1A8MWK0 482 aa9.33□□□□□ -0.92
NPHP3-209ENST00000493732 TTC34A8MYJ7 566 aa9.33□□□□□ -0.92
NPHP3-209ENST00000493732 H3BM21 787 aa9.33□□□□□ -0.92
NPHP3-209ENST00000493732 FOXE1O00358 373 aaPredicted RBP9.33□□□□□ -0.92
NPHP3-209ENST00000493732 MTX2O75431 263 aa9.33□□□□□ -0.92
NPHP3-209ENST00000493732 SEC14L2O76054 403 aa9.33□□□□□ -0.92
NPHP3-209ENST00000493732 LRATO95237 230 aa9.33□□□□□ -0.92
NPHP3-209ENST00000493732 KCNK5O95279 499 aa9.33□□□□□ -0.92
NPHP3-209ENST00000493732 FKBP9O95302 570 aa9.33□□□□□ -0.92
NPHP3-209ENST00000493732 ZNF682O95780 498 aa9.33□□□□□ -0.92
NPHP3-209ENST00000493732 LINC00271P0C7V0 271 aa9.33□□□□□ -0.92
NPHP3-209ENST00000493732 BMP1P13497 986 aa9.33□□□□□ -0.92
NPHP3-209ENST00000493732 FPR1P21462 350 aa9.33□□□□□ -0.92
NPHP3-209ENST00000493732 WEE1P30291 646 aa9.33□□□□□ -0.92
NPHP3-209ENST00000493732 KDELR2P33947 212 aa9.33□□□□□ -0.92
NPHP3-209ENST00000493732 BMPR1AP36894 532 aa9.33□□□□□ -0.92
NPHP3-209ENST00000493732 CXCR4P61073 352 aa9.33□□□□□ -0.92
NPHP3-209ENST00000493732 KCNAB2Q13303 367 aa9.33□□□□□ -0.92
NPHP3-209ENST00000493732 KEAP1Q14145 624 aa9.33□□□□□ -0.92
NPHP3-209ENST00000493732 ELOAQ14241 798 aaKnown RBP9.33□□□□□ -0.92
NPHP3-209ENST00000493732 UGT8Q16880 541 aa9.33□□□□□ -0.92
NPHP3-209ENST00000493732 LRRC73Q5JTD7 316 aa9.33□□□□□ -0.92
NPHP3-209ENST00000493732 EP400NLQ6ZTU2 488 aa9.33□□□□□ -0.92
NPHP3-209ENST00000493732 OTOP2Q7RTS6 562 aa9.33□□□□□ -0.92
NPHP3-209ENST00000493732 PIWIL3Q7Z3Z3 882 aaKnown RBP9.33□□□□□ -0.92
NPHP3-209ENST00000493732 ANKRD46Q86W74 232 aa9.33□□□□□ -0.92
NPHP3-209ENST00000493732 DCP2Q8IU60 420 aaKnown RBP9.33□□□□□ -0.92
NPHP3-209ENST00000493732 CELF5Q8N6W0 485 aaKnown RBP9.33□□□□□ -0.92
NPHP3-209ENST00000493732 RASGEF1AQ8N9B8 481 aa9.33□□□□□ -0.92
NPHP3-209ENST00000493732 PIK3C3Q8NEB9 887 aa9.33□□□□□ -0.92
NPHP3-209ENST00000493732 TMIEQ8NEW7 156 aa9.33□□□□□ -0.92
NPHP3-209ENST00000493732 GAB3Q8WWW8 586 aa9.33□□□□□ -0.92
NPHP3-209ENST00000493732 SNX19Q92543 992 aa9.33□□□□□ -0.92
NPHP3-209ENST00000493732 ZNF566Q969W8 418 aa9.33□□□□□ -0.92
NPHP3-209ENST00000493732 TCEAL4Q96EI5 215 aa9.33□□□□□ -0.92
NPHP3-209ENST00000493732 WDR34Q96EX3 536 aa9.33□□□□□ -0.92
NPHP3-209ENST00000493732 C11orf24Q96F05 449 aaPredicted RBP9.33□□□□□ -0.92
NPHP3-209ENST00000493732 MED8Q96G25 268 aa9.33□□□□□ -0.92
NPHP3-209ENST00000493732 MBOAT4Q96T53 435 aa9.33□□□□□ -0.92
NPHP3-209ENST00000493732 APOL4Q9BPW4 351 aa9.33□□□□□ -0.92
NPHP3-209ENST00000493732 BCL7BQ9BQE9 202 aa9.33□□□□□ -0.92
NPHP3-209ENST00000493732 LINC00597Q9H2U6 94 aa9.33□□□□□ -0.92
NPHP3-209ENST00000493732 TRIT1Q9H3H1 467 aaKnown RBP9.33□□□□□ -0.92
NPHP3-209ENST00000493732 SMURF2Q9HAU4 748 aa9.33□□□□□ -0.92
NPHP3-209ENST00000493732 SLC6A13Q9NSD5 602 aa9.33□□□□□ -0.92
NPHP3-209ENST00000493732 ADPRHL2Q9NX46 363 aa9.33□□□□□ -0.92
NPHP3-209ENST00000493732 VPS4AQ9UN37 437 aa9.33□□□□□ -0.92
NPHP3-209ENST00000493732 FAF1Q9UNN5 650 aaPredicted RBP9.33□□□□□ -0.92
NPHP3-209ENST00000493732 DYRK1BQ9Y463 629 aa9.33□□□□□ -0.92
NPHP3-209ENST00000493732 PLXNA2O75051 1894 aa9.33□□□□□ -0.92
NPHP3-209ENST00000493732 TRIM43BA6NCK2 446 aa9.33□□□□□ -0.92
NPHP3-209ENST00000493732 ANKRD33BA6NCL7 494 aa9.33□□□□□ -0.92
NPHP3-209ENST00000493732 E7EQ34 232 aa9.33□□□□□ -0.92
NPHP3-209ENST00000493732 H3BMQ9 156 aa9.33□□□□□ -0.92
NPHP3-209ENST00000493732 M0QX08 132 aa9.33□□□□□ -0.92
NPHP3-209ENST00000493732 RNASET2O00584 256 aaKnown RBP9.33□□□□□ -0.92
NPHP3-209ENST00000493732 HOXC11O43248 304 aaPredicted RBP9.33□□□□□ -0.92
NPHP3-209ENST00000493732 PRAMEF4O60810 478 aa9.33□□□□□ -0.92
NPHP3-209ENST00000493732 SCN2BO60939 215 aa9.33□□□□□ -0.92
NPHP3-209ENST00000493732 FGBP02675 491 aa9.33□□□□□ -0.92
NPHP3-209ENST00000493732 ANXA4P09525 319 aaPredicted RBP9.33□□□□□ -0.92
NPHP3-209ENST00000493732 ACRP10323 421 aa9.33□□□□□ -0.92
NPHP3-209ENST00000493732 MYCLP1P12525 358 aaPredicted RBP9.33□□□□□ -0.92
NPHP3-209ENST00000493732 DDX5P17844 614 aaKnown RBP9.33□□□□□ -0.92
NPHP3-209ENST00000493732 CCNA2P20248 432 aa9.33□□□□□ -0.92
NPHP3-209ENST00000493732 IGFBP5P24593 272 aa9.33□□□□□ -0.92
NPHP3-209ENST00000493732 PTX3P26022 381 aaPredicted RBP9.33□□□□□ -0.92
NPHP3-209ENST00000493732 CDKN2CP42773 168 aa9.33□□□□□ -0.92
NPHP3-209ENST00000493732 ERVFC1P60507 584 aa9.33□□□□□ -0.92
NPHP3-209ENST00000493732 CSNK2BP67870 215 aa9.33□□□□□ -0.92
NPHP3-209ENST00000493732 PPIGQ13427 754 aaKnown RBP eCLIP9.33□□□□□ -0.92
NPHP3-209ENST00000493732 GTF2H3Q13889 308 aa9.33□□□□□ -0.92
NPHP3-209ENST00000493732 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.33□□□□□ -0.92
NPHP3-209ENST00000493732 ZNF691Q5VV52 312 aa9.33□□□□□ -0.92
NPHP3-209ENST00000493732 GPR107Q5VW38 600 aa9.33□□□□□ -0.92
NPHP3-209ENST00000493732 PRAMEF9Q5VWM5 478 aa9.33□□□□□ -0.92
NPHP3-209ENST00000493732 PLPP4Q5VZY2 271 aa9.33□□□□□ -0.92
NPHP3-209ENST00000493732 TMEM215Q68D42 235 aa9.33□□□□□ -0.92
NPHP3-209ENST00000493732 TMEM220Q6QAJ8 160 aa9.33□□□□□ -0.92
NPHP3-209ENST00000493732 CBLL1Q75N03 491 aa9.33□□□□□ -0.92
NPHP3-209ENST00000493732 HORMAD1Q86X24 394 aa9.33□□□□□ -0.92
NPHP3-209ENST00000493732 ZZZ3Q8IYH5 903 aa9.33□□□□□ -0.92
NPHP3-209ENST00000493732 CHDHQ8NE62 594 aaPredicted RBP9.33□□□□□ -0.92
NPHP3-209ENST00000493732 OR7G3Q8NG95 312 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms