RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 GALNT10Q86SR1 603 aa6.68□□□□□ -1.34
VPS13B-205ENST00000493587 STPG2Q8N412 459 aa6.68□□□□□ -1.34
VPS13B-205ENST00000493587 GPR151Q8TDV0 419 aa6.68□□□□□ -1.34
VPS13B-205ENST00000493587 TADA1Q96BN2 335 aa6.68□□□□□ -1.34
VPS13B-205ENST00000493587 RHOVQ96L33 236 aa6.68□□□□□ -1.34
VPS13B-205ENST00000493587 NSMCE2Q96MF7 247 aa6.68□□□□□ -1.34
VPS13B-205ENST00000493587 SPSB2Q99619 263 aa6.68□□□□□ -1.34
VPS13B-205ENST00000493587 ABCG8Q9H221 673 aa6.68□□□□□ -1.34
VPS13B-205ENST00000493587 RERGLQ9H628 205 aa6.68□□□□□ -1.34
VPS13B-205ENST00000493587 TASP1Q9H6P5 420 aa6.68□□□□□ -1.34
VPS13B-205ENST00000493587 LATS2Q9NRM7 1088 aa6.68□□□□□ -1.34
VPS13B-205ENST00000493587 EMCNQ9ULC0 261 aa6.68□□□□□ -1.34
VPS13B-205ENST00000493587 DLGAP4Q9Y2H0 992 aa6.68□□□□□ -1.34
VPS13B-205ENST00000493587 PADI2Q9Y2J8 665 aa6.68□□□□□ -1.34
VPS13B-205ENST00000493587 MTF2Q9Y483 593 aaPredicted RBP6.68□□□□□ -1.34
VPS13B-205ENST00000493587 TEX264Q9Y6I9 313 aa6.68□□□□□ -1.34
VPS13B-205ENST00000493587 LOC100130705A0A1B0GUX0 176 aa6.67□□□□□ -1.34
VPS13B-205ENST00000493587 A6NCN8 305 aa6.67□□□□□ -1.34
VPS13B-205ENST00000493587 FABP12A6NFH5 140 aa6.67□□□□□ -1.34
VPS13B-205ENST00000493587 TMEM233B4DJY2 109 aa6.67□□□□□ -1.34
VPS13B-205ENST00000493587 INMT-MINDY4F8WBC2 141 aa6.67□□□□□ -1.34
VPS13B-205ENST00000493587 GPR25O00155 361 aa6.67□□□□□ -1.34
VPS13B-205ENST00000493587 SCAMP3O14828 347 aaKnown RBP6.67□□□□□ -1.34
VPS13B-205ENST00000493587 SCAMP1O15126 338 aa6.67□□□□□ -1.34
VPS13B-205ENST00000493587 GSRP00390 522 aa6.67□□□□□ -1.34
VPS13B-205ENST00000493587 COX5BP10606 129 aa6.67□□□□□ -1.34
VPS13B-205ENST00000493587 SSTR4P31391 388 aa6.67□□□□□ -1.34
VPS13B-205ENST00000493587 LIPAP38571 399 aa6.67□□□□□ -1.34
VPS13B-205ENST00000493587 GRIA4P48058 902 aa6.67□□□□□ -1.34
VPS13B-205ENST00000493587 GMPSP49915 693 aaPredicted RBP6.67□□□□□ -1.34
VPS13B-205ENST00000493587 GABREP78334 506 aa6.67□□□□□ -1.34
VPS13B-205ENST00000493587 TNFRSF17Q02223 184 aa6.67□□□□□ -1.34
VPS13B-205ENST00000493587 RAB33AQ14088 237 aa6.67□□□□□ -1.34
VPS13B-205ENST00000493587 PUM1Q14671 1186 aaKnown RBP eCLIP6.67□□□□□ -1.34
VPS13B-205ENST00000493587 ETFRF1Q6IPR1 90 aa6.67□□□□□ -1.34
VPS13B-205ENST00000493587 PDE12Q6L8Q7 609 aaKnown RBP6.67□□□□□ -1.34
VPS13B-205ENST00000493587 SCYL2Q6P3W7 929 aa6.67□□□□□ -1.34
VPS13B-205ENST00000493587 NLRC5Q86WI3 1866 aa6.67□□□□□ -1.34
VPS13B-205ENST00000493587 MS4A15Q8N5U1 240 aa6.67□□□□□ -1.34
VPS13B-205ENST00000493587 SETD9Q8NE22 299 aa6.67□□□□□ -1.34
VPS13B-205ENST00000493587 OR8D4Q8NGM9 314 aa6.67□□□□□ -1.34
VPS13B-205ENST00000493587 SHC3Q92529 594 aa6.67□□□□□ -1.34
VPS13B-205ENST00000493587 ACOX2Q99424 681 aa6.67□□□□□ -1.34
VPS13B-205ENST00000493587 SH2D3AQ9BRG2 576 aa6.67□□□□□ -1.34
VPS13B-205ENST00000493587 ZNF436Q9C0F3 470 aaPredicted RBP6.67□□□□□ -1.34
VPS13B-205ENST00000493587 DNTTIP1Q9H147 329 aa6.67□□□□□ -1.34
VPS13B-205ENST00000493587 OR51E2Q9H255 320 aa6.67□□□□□ -1.34
VPS13B-205ENST00000493587 MROH8Q9H579 483 aa6.67□□□□□ -1.34
VPS13B-205ENST00000493587 XKR8Q9H6D3 395 aa6.67□□□□□ -1.34
VPS13B-205ENST00000493587 SMURF1Q9HCE7 757 aa6.67□□□□□ -1.34
VPS13B-205ENST00000493587 MED16Q9Y2X0 877 aa6.67□□□□□ -1.34
VPS13B-205ENST00000493587 ZNF451Q9Y4E5 1061 aa6.67□□□□□ -1.34
VPS13B-205ENST00000493587 PCDHB5Q9Y5E4 795 aa6.67□□□□□ -1.34
VPS13B-205ENST00000493587 RPS10-NUDT3A0A1W2PQS6 291 aa6.67□□□□□ -1.34
VPS13B-205ENST00000493587 RRN3P2A6NIE6 340 aa6.67□□□□□ -1.34
VPS13B-205ENST00000493587 M0QZ92 97 aa6.67□□□□□ -1.34
VPS13B-205ENST00000493587 TRIM3O75382 744 aaPredicted RBP6.67□□□□□ -1.34
VPS13B-205ENST00000493587 YBX3P16989 372 aaKnown RBP eCLIP6.67□□□□□ -1.34
VPS13B-205ENST00000493587 PCMT1P22061 227 aa6.67□□□□□ -1.34
VPS13B-205ENST00000493587 PAICSP22234 425 aaKnown RBP6.67□□□□□ -1.34
VPS13B-205ENST00000493587 PRKACGP22612 351 aa6.67□□□□□ -1.34
VPS13B-205ENST00000493587 DNASE1P24855 282 aa6.67□□□□□ -1.34
VPS13B-205ENST00000493587 RPS12P25398 132 aaKnown RBP6.67□□□□□ -1.34
VPS13B-205ENST00000493587 MAGEA2P43356 314 aa6.67□□□□□ -1.34
VPS13B-205ENST00000493587 BCAR1P56945 870 aa6.67□□□□□ -1.34
VPS13B-205ENST00000493587 YWHAZP63104 245 aaKnown RBP6.67□□□□□ -1.34
VPS13B-205ENST00000493587 ROR1Q01973 937 aa6.67□□□□□ -1.34
VPS13B-205ENST00000493587 TARBP2Q15633 366 aaKnown RBP6.67□□□□□ -1.34
VPS13B-205ENST00000493587 CHRNA6Q15825 494 aa6.67□□□□□ -1.34
VPS13B-205ENST00000493587 UGT8Q16880 541 aa6.67□□□□□ -1.34
VPS13B-205ENST00000493587 MINDY4Q4G0A6 757 aa6.67□□□□□ -1.34
VPS13B-205ENST00000493587 PAN2Q504Q3 1202 aaKnown RBP6.67□□□□□ -1.34
VPS13B-205ENST00000493587 PADI6Q6TGC4 694 aa6.67□□□□□ -1.34
VPS13B-205ENST00000493587 LRRC8DQ7L1W4 858 aa6.67□□□□□ -1.34
VPS13B-205ENST00000493587 LIX1LQ8IVB5 337 aa6.67□□□□□ -1.34
VPS13B-205ENST00000493587 SLC34A3Q8N130 599 aa6.67□□□□□ -1.34
VPS13B-205ENST00000493587 OXR1Q8N573 874 aa6.67□□□□□ -1.34
VPS13B-205ENST00000493587 ARFGAP1Q8N6T3 406 aa6.67□□□□□ -1.34
VPS13B-205ENST00000493587 C2orf69Q8N8R5 385 aa6.67□□□□□ -1.34
VPS13B-205ENST00000493587 CYP2W1Q8TAV3 490 aa6.67□□□□□ -1.34
VPS13B-205ENST00000493587 C19orf60Q96EN9 201 aa6.67□□□□□ -1.34
VPS13B-205ENST00000493587 AURKBQ96GD4 344 aaPredicted RBP6.67□□□□□ -1.34
VPS13B-205ENST00000493587 MRPL4Q9BYD3 311 aaKnown RBP6.67□□□□□ -1.34
VPS13B-205ENST00000493587 GSDMCQ9BYG8 508 aa6.67□□□□□ -1.34
VPS13B-205ENST00000493587 NKX6-2Q9C056 277 aaPredicted RBP6.67□□□□□ -1.34
VPS13B-205ENST00000493587 ST6GALNAC4Q9H4F1 302 aa6.67□□□□□ -1.34
VPS13B-205ENST00000493587 ANKRD19PQ9H560 264 aa6.67□□□□□ -1.34
VPS13B-205ENST00000493587 ELAC1Q9H777 363 aaKnown RBP6.67□□□□□ -1.34
VPS13B-205ENST00000493587 MBD1Q9UIS9 605 aaPredicted RBP6.67□□□□□ -1.34
VPS13B-205ENST00000493587 FZD1Q9UP38 647 aa6.67□□□□□ -1.34
VPS13B-205ENST00000493587 INVSQ9Y283 1065 aa6.67□□□□□ -1.34
VPS13B-205ENST00000493587 PCDHA1Q9Y5I3 950 aa6.67□□□□□ -1.34
VPS13B-205ENST00000493587 PTCH2Q9Y6C5 1203 aa6.67□□□□□ -1.34
VPS13B-205ENST00000493587 TRIP11Q15643 1979 aa6.67□□□□□ -1.34
VPS13B-205ENST00000493587 CCDC85CA6NKD9 419 aa6.67□□□□□ -1.34
VPS13B-205ENST00000493587 SLCO1B7G3V0H7 640 aa6.67□□□□□ -1.34
VPS13B-205ENST00000493587 SULT1C2O00338 296 aa6.67□□□□□ -1.34
VPS13B-205ENST00000493587 ABCD4O14678 606 aa6.67□□□□□ -1.34
VPS13B-205ENST00000493587 SLC31A2O15432 143 aa6.67□□□□□ -1.34
VPS13B-205ENST00000493587 ATP6AP2O75787 350 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms