RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 SUV39H1O43463 412 aa11.12□□□□□ -0.63
CTSA-209ENST00000493522 NRP2O60462 931 aa11.12□□□□□ -0.63
CTSA-209ENST00000493522 CDH16O75309 829 aa11.12□□□□□ -0.63
CTSA-209ENST00000493522 KRT15P19012 456 aa11.12□□□□□ -0.63
CTSA-209ENST00000493522 GRIA3P42263 894 aa11.12□□□□□ -0.63
CTSA-209ENST00000493522 HNMTP50135 292 aa11.12□□□□□ -0.63
CTSA-209ENST00000493522 YBX1P67809 324 aaKnown RBP11.12□□□□□ -0.63
CTSA-209ENST00000493522 ABATP80404 500 aa11.12□□□□□ -0.63
CTSA-209ENST00000493522 NFKB2Q00653 900 aa11.12□□□□□ -0.63
CTSA-209ENST00000493522 IL11RAQ14626 422 aa11.12□□□□□ -0.63
CTSA-209ENST00000493522 TBR1Q16650 682 aa11.12□□□□□ -0.63
CTSA-209ENST00000493522 C18orf21Q32NC0 220 aaPredicted RBP11.12□□□□□ -0.63
CTSA-209ENST00000493522 TECRLQ5HYJ1 363 aa11.12□□□□□ -0.63
CTSA-209ENST00000493522 FCRL6Q6DN72 434 aa11.12□□□□□ -0.63
CTSA-209ENST00000493522 LCTLQ6UWM7 567 aa11.12□□□□□ -0.63
CTSA-209ENST00000493522 C17orf64Q86WR6 236 aa11.12□□□□□ -0.63
CTSA-209ENST00000493522 ZFAND4Q86XD8 727 aa11.12□□□□□ -0.63
CTSA-209ENST00000493522 PPP1R3BQ86XI6 285 aa11.12□□□□□ -0.63
CTSA-209ENST00000493522 DTX1Q86Y01 620 aa11.12□□□□□ -0.63
CTSA-209ENST00000493522 TDRPQ86YL5 185 aa11.12□□□□□ -0.63
CTSA-209ENST00000493522 CNPY4Q8N129 248 aa11.12□□□□□ -0.63
CTSA-209ENST00000493522 PLD6Q8N2A8 252 aaKnown RBP11.12□□□□□ -0.63
CTSA-209ENST00000493522 TCAIMQ8N3R3 496 aa11.12□□□□□ -0.63
CTSA-209ENST00000493522 OR56A3Q8NH54 315 aa11.12□□□□□ -0.63
CTSA-209ENST00000493522 ZPBPQ9BS86 351 aa11.12□□□□□ -0.63
CTSA-209ENST00000493522 SGPP1Q9BX95 441 aa11.12□□□□□ -0.63
CTSA-209ENST00000493522 SLC25A18Q9H1K4 315 aa11.12□□□□□ -0.63
CTSA-209ENST00000493522 CPSF2Q9P2I0 782 aaKnown RBP11.12□□□□□ -0.63
CTSA-209ENST00000493522 ANKMY1Q9P2S6 941 aa11.12□□□□□ -0.63
CTSA-209ENST00000493522 SH2B3Q9UQQ2 575 aa11.12□□□□□ -0.63
CTSA-209ENST00000493522 PLAAQ9Y263 795 aa11.12□□□□□ -0.63
CTSA-209ENST00000493522 DYRK1BQ9Y463 629 aa11.12□□□□□ -0.63
CTSA-209ENST00000493522 PCDHGA3Q9Y5H0 932 aa11.12□□□□□ -0.63
CTSA-209ENST00000493522 CCDC88CQ9P219 2028 aa11.12□□□□□ -0.63
CTSA-209ENST00000493522 FLNCQ14315 2725 aa11.12□□□□□ -0.63
CTSA-209ENST00000493522 SPENQ96T58 3664 aaKnown RBP11.12□□□□□ -0.63
CTSA-209ENST00000493522 A0A0J9YVX5 310 aa11.11□□□□□ -0.63
CTSA-209ENST00000493522 SYCE1LA8MT33 242 aa11.11□□□□□ -0.63
CTSA-209ENST00000493522 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.11□□□□□ -0.63
CTSA-209ENST00000493522 STMND1H3BQB6 276 aa11.11□□□□□ -0.63
CTSA-209ENST00000493522 RFPL1O75677 317 aa11.11□□□□□ -0.63
CTSA-209ENST00000493522 IPO13O94829 963 aaKnown RBP11.11□□□□□ -0.63
CTSA-209ENST00000493522 WDR47O94967 919 aa11.11□□□□□ -0.63
CTSA-209ENST00000493522 MT-ND3P03897 115 aa11.11□□□□□ -0.63
CTSA-209ENST00000493522 FGF5P12034 268 aa11.11□□□□□ -0.63
CTSA-209ENST00000493522 COL6A2P12110 1019 aa11.11□□□□□ -0.63
CTSA-209ENST00000493522 ITGA1P56199 1179 aa11.11□□□□□ -0.63
CTSA-209ENST00000493522 PRDX1Q06830 199 aaKnown RBP11.11□□□□□ -0.63
CTSA-209ENST00000493522 ACAP2Q15057 778 aa11.11□□□□□ -0.63
CTSA-209ENST00000493522 ZXDCQ2QGD7 858 aaPredicted RBP11.11□□□□□ -0.63
CTSA-209ENST00000493522 PTCHD3Q3KNS1 767 aa11.11□□□□□ -0.63
CTSA-209ENST00000493522 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.11□□□□□ -0.63
CTSA-209ENST00000493522 FBXO48Q5FWF7 155 aa11.11□□□□□ -0.63
CTSA-209ENST00000493522 SULT1C3Q6IMI6 304 aa11.11□□□□□ -0.63
CTSA-209ENST00000493522 TIFABQ6ZNK6 161 aa11.11□□□□□ -0.63
CTSA-209ENST00000493522 ISCA2Q86U28 154 aa11.11□□□□□ -0.63
CTSA-209ENST00000493522 THOC6Q86W42 341 aaKnown RBP11.11□□□□□ -0.63
CTSA-209ENST00000493522 TMEM126BQ8IUX1 230 aa11.11□□□□□ -0.63
CTSA-209ENST00000493522 RIBC1Q8N443 379 aaPredicted RBP11.11□□□□□ -0.63
CTSA-209ENST00000493522 PDPRQ8NCN5 879 aa11.11□□□□□ -0.63
CTSA-209ENST00000493522 OR8K5Q8NH50 307 aa11.11□□□□□ -0.63
CTSA-209ENST00000493522 OR1L3Q8NH93 324 aa11.11□□□□□ -0.63
CTSA-209ENST00000493522 MZB1Q8WU39 189 aa11.11□□□□□ -0.63
CTSA-209ENST00000493522 RHBDF1Q96CC6 855 aa11.11□□□□□ -0.63
CTSA-209ENST00000493522 ZNF501Q96CX3 271 aaPredicted RBP11.11□□□□□ -0.63
CTSA-209ENST00000493522 ATOH8Q96SQ7 321 aa11.11□□□□□ -0.63
CTSA-209ENST00000493522 TMEM79Q9BSE2 394 aa11.11□□□□□ -0.63
CTSA-209ENST00000493522 HAUS8Q9BT25 410 aa11.11□□□□□ -0.63
CTSA-209ENST00000493522 ULBP3Q9BZM4 244 aa11.11□□□□□ -0.63
CTSA-209ENST00000493522 CHRNA10Q9GZZ6 450 aa11.11□□□□□ -0.63
CTSA-209ENST00000493522 CNOT10Q9H9A5 744 aaKnown RBP11.11□□□□□ -0.63
CTSA-209ENST00000493522 ZNF358Q9NW07 568 aa11.11□□□□□ -0.63
CTSA-209ENST00000493522 GEMIN8Q9NWZ8 242 aaKnown RBP11.11□□□□□ -0.63
CTSA-209ENST00000493522 XPR1Q9UBH6 696 aa11.11□□□□□ -0.63
CTSA-209ENST00000493522 PLCL2Q9UPR0 1127 aa11.11□□□□□ -0.63
CTSA-209ENST00000493522 SCN3AQ9NY46 2000 aa11.11□□□□□ -0.63
CTSA-209ENST00000493522 IGKV1-8A0A0C4DH67 115 aa11.1□□□□□ -0.63
CTSA-209ENST00000493522 CCDC189A1A4V9 331 aa11.1□□□□□ -0.63
CTSA-209ENST00000493522 OR2A25A4D2G3 310 aa11.1□□□□□ -0.63
CTSA-209ENST00000493522 CCDC151A5D8V7 595 aa11.1□□□□□ -0.63
CTSA-209ENST00000493522 FOXO6A8MYZ6 492 aa11.1□□□□□ -0.63
CTSA-209ENST00000493522 TARM1B6A8C7 271 aa11.1□□□□□ -0.63
CTSA-209ENST00000493522 HCRTR1O43613 425 aa11.1□□□□□ -0.63
CTSA-209ENST00000493522 CTSVO60911 334 aa11.1□□□□□ -0.63
CTSA-209ENST00000493522 SCRG1O75711 98 aa11.1□□□□□ -0.63
CTSA-209ENST00000493522 OR2B3O76000 313 aa11.1□□□□□ -0.63
CTSA-209ENST00000493522 STK17BO94768 372 aa11.1□□□□□ -0.63
CTSA-209ENST00000493522 KIAA0754O94854 1291 aa11.1□□□□□ -0.63
CTSA-209ENST00000493522 TIAF1O95411 115 aa11.1□□□□□ -0.63
CTSA-209ENST00000493522 RBP1P09455 135 aa11.1□□□□□ -0.63
CTSA-209ENST00000493522 PYGBP11216 843 aa11.1□□□□□ -0.63
CTSA-209ENST00000493522 CDH1P12830 882 aa11.1□□□□□ -0.63
CTSA-209ENST00000493522 GFAPP14136 432 aa11.1□□□□□ -0.63
CTSA-209ENST00000493522 ZNF28P17035 718 aa11.1□□□□□ -0.63
CTSA-209ENST00000493522 SLC6A12P48065 614 aa11.1□□□□□ -0.63
CTSA-209ENST00000493522 GABRA4P48169 554 aa11.1□□□□□ -0.63
CTSA-209ENST00000493522 HSPA7P48741 367 aa11.1□□□□□ -0.63
CTSA-209ENST00000493522 ATP1A2P50993 1020 aa11.1□□□□□ -0.63
CTSA-209ENST00000493522 CYP4F2P78329 520 aa11.1□□□□□ -0.63
CTSA-209ENST00000493522 ZC3H12BQ5HYM0 836 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms