RNA–Protein interactions for RNA: ENST00000492601.2

SGMS1-204, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-204ENST00000492601 RNF224P0DH78 156 aa16.43■□□□□ 0.22
SGMS1-204ENST00000492601 ACPPP15309 386 aa16.43■□□□□ 0.22
SGMS1-204ENST00000492601 CARSP49589 748 aaKnown RBP16.43■□□□□ 0.22
SGMS1-204ENST00000492601 Q0VFX4 171 aa16.43■□□□□ 0.22
SGMS1-204ENST00000492601 PPP1R7Q15435 360 aa16.43■□□□□ 0.22
SGMS1-204ENST00000492601 AGAP7PQ5VUJ5 663 aa16.43■□□□□ 0.22
SGMS1-204ENST00000492601 HIST2H2BCQ6DN03 193 aa16.43■□□□□ 0.22
SGMS1-204ENST00000492601 ZNF425Q6IV72 752 aa16.43■□□□□ 0.22
SGMS1-204ENST00000492601 UBE2R2Q712K3 238 aaPredicted RBP16.43■□□□□ 0.22
SGMS1-204ENST00000492601 PIWIL4Q7Z3Z4 852 aaKnown RBP16.43■□□□□ 0.22
SGMS1-204ENST00000492601 LAPTM4BQ86VI4 370 aa16.43■□□□□ 0.22
SGMS1-204ENST00000492601 KCNMB4Q86W47 210 aa16.43■□□□□ 0.22
SGMS1-204ENST00000492601 PLD3Q8IV08 490 aa16.43■□□□□ 0.22
SGMS1-204ENST00000492601 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.43■□□□□ 0.22
SGMS1-204ENST00000492601 FBXO15Q8NCQ5 510 aaPredicted RBP16.43■□□□□ 0.22
SGMS1-204ENST00000492601 ACTRT1Q8TDG2 376 aa16.43■□□□□ 0.22
SGMS1-204ENST00000492601 GRK7Q8WTQ7 553 aa16.43■□□□□ 0.22
SGMS1-204ENST00000492601 RERGQ96A58 199 aaPredicted RBP16.43■□□□□ 0.22
SGMS1-204ENST00000492601 VPS50Q96JG6 964 aa16.43■□□□□ 0.22
SGMS1-204ENST00000492601 AGAP4Q96P64 663 aa16.43■□□□□ 0.22
SGMS1-204ENST00000492601 WDR77Q9BQA1 342 aaPredicted RBP16.43■□□□□ 0.22
SGMS1-204ENST00000492601 ZNF160Q9HCG1 818 aa16.43■□□□□ 0.22
SGMS1-204ENST00000492601 CUEDC1Q9NWM3 386 aaPredicted RBP16.43■□□□□ 0.22
SGMS1-204ENST00000492601 KLHL42Q9P2K6 505 aa16.43■□□□□ 0.22
SGMS1-204ENST00000492601 TRPC4Q9UBN4 977 aa16.43■□□□□ 0.22
SGMS1-204ENST00000492601 PCDHGA10Q9Y5H3 936 aa16.43■□□□□ 0.22
SGMS1-204ENST00000492601 COPG1Q9Y678 874 aaKnown RBP16.43■□□□□ 0.22
SGMS1-204ENST00000492601 NOTCH2Q04721 2471 aa16.42■□□□□ 0.22
SGMS1-204ENST00000492601 TEX15Q9BXT5 2789 aa16.42■□□□□ 0.22
SGMS1-204ENST00000492601 GOLGA6L10A0A0M3HER8 536 aa16.42■□□□□ 0.22
SGMS1-204ENST00000492601 GFYI3L273 518 aa16.42■□□□□ 0.22
SGMS1-204ENST00000492601 MAP2K7O14733 419 aa16.42■□□□□ 0.22
SGMS1-204ENST00000492601 HAT1O14929 419 aa16.42■□□□□ 0.22
SGMS1-204ENST00000492601 STATHP02808 62 aa16.42■□□□□ 0.22
SGMS1-204ENST00000492601 ENO3P13929 434 aaPredicted RBP16.42■□□□□ 0.22
SGMS1-204ENST00000492601 EZRP15311 586 aaKnown RBP16.42■□□□□ 0.22
SGMS1-204ENST00000492601 IMPA1P29218 277 aa16.42■□□□□ 0.22
SGMS1-204ENST00000492601 FNTAP49354 379 aa16.42■□□□□ 0.22
SGMS1-204ENST00000492601 RNASEH2BQ5TBB1 312 aaKnown RBP16.42■□□□□ 0.22
SGMS1-204ENST00000492601 FAAH2Q6GMR7 532 aa16.42■□□□□ 0.22
SGMS1-204ENST00000492601 LMNTD2Q8IXW0 634 aa16.42■□□□□ 0.22
SGMS1-204ENST00000492601 LRRC56Q8IYG6 542 aaPredicted RBP16.42■□□□□ 0.22
SGMS1-204ENST00000492601 SSC4DQ8WTU2 575 aa16.42■□□□□ 0.22
SGMS1-204ENST00000492601 MMABQ96EY8 250 aaPredicted RBP16.42■□□□□ 0.22
SGMS1-204ENST00000492601 CNDP1Q96KN2 507 aa16.42■□□□□ 0.22
SGMS1-204ENST00000492601 OR2A5Q96R48 311 aa16.42■□□□□ 0.22
SGMS1-204ENST00000492601 NDNQ99608 321 aa16.42■□□□□ 0.22
SGMS1-204ENST00000492601 FAM167BQ9BTA0 163 aa16.42■□□□□ 0.22
SGMS1-204ENST00000492601 AARSD1Q9BTE6 412 aaKnown RBP16.42■□□□□ 0.22
SGMS1-204ENST00000492601 LHPPQ9H008 270 aa16.42■□□□□ 0.22
SGMS1-204ENST00000492601 UTP6Q9NYH9 597 aaKnown RBP16.42■□□□□ 0.22
SGMS1-204ENST00000492601 CDC14AQ9UNH5 594 aa16.42■□□□□ 0.22
SGMS1-204ENST00000492601 NTNG1Q9Y2I2 539 aa16.42■□□□□ 0.22
SGMS1-204ENST00000492601 COMMD10Q9Y6G5 202 aa16.42■□□□□ 0.22
SGMS1-204ENST00000492601 UNC79Q9P2D8 2635 aa16.42■□□□□ 0.22
SGMS1-204ENST00000492601 IGLV3-12A0A075B6K2 115 aa16.41■□□□□ 0.22
SGMS1-204ENST00000492601 A0A0A6YYC8 382 aaPredicted RBP16.41■□□□□ 0.22
SGMS1-204ENST00000492601 H7BY64 318 aa16.41■□□□□ 0.22
SGMS1-204ENST00000492601 I3L1I5 382 aaPredicted RBP16.41■□□□□ 0.22
SGMS1-204ENST00000492601 P2RX6O15547 441 aa16.41■□□□□ 0.22
SGMS1-204ENST00000492601 CBX6O95503 412 aa16.41■□□□□ 0.22
SGMS1-204ENST00000492601 PGAM1P18669 254 aa16.41■□□□□ 0.22
SGMS1-204ENST00000492601 SKIV2L2P42285 1042 aaKnown RBP16.41■□□□□ 0.22
SGMS1-204ENST00000492601 EMP3P54852 163 aa16.41■□□□□ 0.22
SGMS1-204ENST00000492601 DSG2Q14126 1118 aa16.41■□□□□ 0.22
SGMS1-204ENST00000492601 CRYMQ14894 314 aa16.41■□□□□ 0.22
SGMS1-204ENST00000492601 SYT16Q17RD7 645 aa16.41■□□□□ 0.22
SGMS1-204ENST00000492601 CRB2Q5IJ48 1285 aa16.41■□□□□ 0.22
SGMS1-204ENST00000492601 LINC00696Q6ZRV3 163 aa16.41■□□□□ 0.22
SGMS1-204ENST00000492601 AMER3Q8N944 861 aa16.41■□□□□ 0.22
SGMS1-204ENST00000492601 DNAJB14Q8TBM8 379 aa16.41■□□□□ 0.22
SGMS1-204ENST00000492601 PRAP1Q96NZ9 151 aa16.41■□□□□ 0.22
SGMS1-204ENST00000492601 DDX47Q9H0S4 455 aaKnown RBP16.41■□□□□ 0.22
SGMS1-204ENST00000492601 ASIC3Q9UHC3 531 aa16.41■□□□□ 0.22
SGMS1-204ENST00000492601 TRMT6Q9UJA5 497 aaKnown RBP16.41■□□□□ 0.22
SGMS1-204ENST00000492601 SNX12Q9UMY4 172 aa16.41■□□□□ 0.22
SGMS1-204ENST00000492601 NOVA2Q9UNW9 492 aaKnown RBP16.41■□□□□ 0.22
SGMS1-204ENST00000492601 IDSB3KWA1 339 aa16.4■□□□□ 0.22
SGMS1-204ENST00000492601 HPP00738 406 aa16.4■□□□□ 0.22
SGMS1-204ENST00000492601 ANXA5P08758 320 aa16.4■□□□□ 0.22
SGMS1-204ENST00000492601 EMP2P54851 167 aa16.4■□□□□ 0.22
SGMS1-204ENST00000492601 ABATP80404 500 aa16.4■□□□□ 0.22
SGMS1-204ENST00000492601 TIAL1Q01085 375 aaKnown RBP eCLIP16.4■□□□□ 0.22
SGMS1-204ENST00000492601 EEF1A2Q05639 463 aaKnown RBP16.4■□□□□ 0.22
SGMS1-204ENST00000492601 DHX9Q08211 1270 aaKnown RBP16.4■□□□□ 0.22
SGMS1-204ENST00000492601 PTK6Q13882 451 aa16.4■□□□□ 0.22
SGMS1-204ENST00000492601 MSS51Q4VC12 460 aa16.4■□□□□ 0.22
SGMS1-204ENST00000492601 ATG9BQ674R7 924 aa16.4■□□□□ 0.22
SGMS1-204ENST00000492601 IGFL2Q6UWQ7 119 aa16.4■□□□□ 0.22
SGMS1-204ENST00000492601 MBOAT1Q6ZNC8 495 aa16.4■□□□□ 0.22
SGMS1-204ENST00000492601 C2CD4AQ8NCU7 369 aaPredicted RBP16.4■□□□□ 0.22
SGMS1-204ENST00000492601 PPP4R1Q8TF05 950 aa16.4■□□□□ 0.22
SGMS1-204ENST00000492601 EEF1AKMT1Q8WVE0 214 aa16.4■□□□□ 0.22
SGMS1-204ENST00000492601 MVB12AQ96EY5 273 aa16.4■□□□□ 0.22
SGMS1-204ENST00000492601 DRC3Q9H069 523 aa16.4■□□□□ 0.22
SGMS1-204ENST00000492601 TRMT1Q9NXH9 659 aaKnown RBP16.4■□□□□ 0.22
SGMS1-204ENST00000492601 PLEKHB1Q9UF11 243 aaPredicted RBP16.4■□□□□ 0.22
SGMS1-204ENST00000492601 ADAMTS6Q9UKP5 1117 aa16.4■□□□□ 0.22
SGMS1-204ENST00000492601 MRPS2Q9Y399 296 aaKnown RBP16.4■□□□□ 0.22
SGMS1-204ENST00000492601 NSG1A0A0A6YYJ2 146 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms