RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 IRAK4Q9NWZ3 460 aa7.97□□□□□ -1.13
SMARCB1-207ENST00000491967 PLEKHB1Q9UF11 243 aaPredicted RBP7.97□□□□□ -1.13
SMARCB1-207ENST00000491967 FBXO5Q9UKT4 447 aa7.97□□□□□ -1.13
SMARCB1-207ENST00000491967 CDC14AQ9UNH5 594 aa7.97□□□□□ -1.13
SMARCB1-207ENST00000491967 RUVBL1Q9Y265 456 aaKnown RBP7.97□□□□□ -1.13
SMARCB1-207ENST00000491967 CSAG2Q9Y5P2 127 aa7.97□□□□□ -1.13
SMARCB1-207ENST00000491967 MAU2Q9Y6X3 613 aa7.97□□□□□ -1.13
SMARCB1-207ENST00000491967 MYO7BQ6PIF6 2116 aa7.97□□□□□ -1.13
SMARCB1-207ENST00000491967 IDSB3KWA1 339 aa7.96□□□□□ -1.14
SMARCB1-207ENST00000491967 KLHL18O94889 574 aa7.96□□□□□ -1.14
SMARCB1-207ENST00000491967 AGFG2O95081 481 aa7.96□□□□□ -1.14
SMARCB1-207ENST00000491967 CCNDBP1O95273 360 aa7.96□□□□□ -1.14
SMARCB1-207ENST00000491967 SERPINA7P05543 415 aa7.96□□□□□ -1.14
SMARCB1-207ENST00000491967 COX6A1P12074 109 aa7.96□□□□□ -1.14
SMARCB1-207ENST00000491967 ACPPP15309 386 aa7.96□□□□□ -1.14
SMARCB1-207ENST00000491967 FDXRP22570 491 aa7.96□□□□□ -1.14
SMARCB1-207ENST00000491967 ITGA3P26006 1051 aa7.96□□□□□ -1.14
SMARCB1-207ENST00000491967 IMPA1P29218 277 aa7.96□□□□□ -1.14
SMARCB1-207ENST00000491967 RPA3P35244 121 aaPredicted RBP7.96□□□□□ -1.14
SMARCB1-207ENST00000491967 SLC1A2P43004 574 aa7.96□□□□□ -1.14
SMARCB1-207ENST00000491967 FNTAP49354 379 aa7.96□□□□□ -1.14
SMARCB1-207ENST00000491967 VPS41P49754 854 aa7.96□□□□□ -1.14
SMARCB1-207ENST00000491967 EFNA3P52797 238 aa7.96□□□□□ -1.14
SMARCB1-207ENST00000491967 SNRPNP63162 240 aaKnown RBP7.96□□□□□ -1.14
SMARCB1-207ENST00000491967 OCA2Q04671 838 aa7.96□□□□□ -1.14
SMARCB1-207ENST00000491967 MFAP5Q13361 173 aa7.96□□□□□ -1.14
SMARCB1-207ENST00000491967 RBBP7Q16576 425 aa7.96□□□□□ -1.14
SMARCB1-207ENST00000491967 ZXDCQ2QGD7 858 aaPredicted RBP7.96□□□□□ -1.14
SMARCB1-207ENST00000491967 VWA2Q5GFL6 755 aa7.96□□□□□ -1.14
SMARCB1-207ENST00000491967 CASC4Q6P4E1 433 aa7.96□□□□□ -1.14
SMARCB1-207ENST00000491967 ISLR2Q6UXK2 745 aa7.96□□□□□ -1.14
SMARCB1-207ENST00000491967 RIPOR1Q6ZS17 1223 aa7.96□□□□□ -1.14
SMARCB1-207ENST00000491967 SHISA6Q6ZSJ9 500 aa7.96□□□□□ -1.14
SMARCB1-207ENST00000491967 VN1R4Q7Z5H5 301 aa7.96□□□□□ -1.14
SMARCB1-207ENST00000491967 KCNMB4Q86W47 210 aa7.96□□□□□ -1.14
SMARCB1-207ENST00000491967 SPNS2Q8IVW8 549 aa7.96□□□□□ -1.14
SMARCB1-207ENST00000491967 PPIL6Q8IXY8 311 aa7.96□□□□□ -1.14
SMARCB1-207ENST00000491967 OTUD6BQ8N6M0 293 aa7.96□□□□□ -1.14
SMARCB1-207ENST00000491967 CSNK1A1LQ8N752 337 aa7.96□□□□□ -1.14
SMARCB1-207ENST00000491967 ST6GALNAC3Q8NDV1 305 aa7.96□□□□□ -1.14
SMARCB1-207ENST00000491967 CALML6Q8TD86 181 aa7.96□□□□□ -1.14
SMARCB1-207ENST00000491967 HAS2Q92819 552 aa7.96□□□□□ -1.14
SMARCB1-207ENST00000491967 ZNF669Q96BR6 464 aaPredicted RBP7.96□□□□□ -1.14
SMARCB1-207ENST00000491967 MIEF2Q96C03 454 aa7.96□□□□□ -1.14
SMARCB1-207ENST00000491967 THAP11Q96EK4 314 aa7.96□□□□□ -1.14
SMARCB1-207ENST00000491967 IMMP1LQ96LU5 166 aa7.96□□□□□ -1.14
SMARCB1-207ENST00000491967 OSBPL9Q96SU4 736 aa7.96□□□□□ -1.14
SMARCB1-207ENST00000491967 GPR21Q99679 349 aa7.96□□□□□ -1.14
SMARCB1-207ENST00000491967 EBNA1BP2Q99848 306 aaKnown RBP7.96□□□□□ -1.14
SMARCB1-207ENST00000491967 AARSD1Q9BTE6 412 aaKnown RBP7.96□□□□□ -1.14
SMARCB1-207ENST00000491967 CRB3Q9BUF7 120 aa7.96□□□□□ -1.14
SMARCB1-207ENST00000491967 SARGQ9BW04 601 aa7.96□□□□□ -1.14
SMARCB1-207ENST00000491967 ACAT2Q9BWD1 397 aa7.96□□□□□ -1.14
SMARCB1-207ENST00000491967 PLAC1Q9HBJ0 212 aa7.96□□□□□ -1.14
SMARCB1-207ENST00000491967 MKKSQ9NPJ1 570 aaPredicted RBP7.96□□□□□ -1.14
SMARCB1-207ENST00000491967 TMEM184CQ9NVA4 438 aa7.96□□□□□ -1.14
SMARCB1-207ENST00000491967 C14orf105Q9NVL8 296 aa7.96□□□□□ -1.14
SMARCB1-207ENST00000491967 UTP6Q9NYH9 597 aaKnown RBP7.96□□□□□ -1.14
SMARCB1-207ENST00000491967 SAMD15Q9P1V8 674 aa7.96□□□□□ -1.14
SMARCB1-207ENST00000491967 STOX2Q9P2F5 926 aaPredicted RBP7.96□□□□□ -1.14
SMARCB1-207ENST00000491967 TAC3Q9UHF0 121 aa7.96□□□□□ -1.14
SMARCB1-207ENST00000491967 PCYOX1Q9UHG3 505 aa7.96□□□□□ -1.14
SMARCB1-207ENST00000491967 ERRFI1Q9UJM3 462 aaPredicted RBP7.96□□□□□ -1.14
SMARCB1-207ENST00000491967 C3orf18Q9UK00 162 aa7.96□□□□□ -1.14
SMARCB1-207ENST00000491967 NOVA2Q9UNW9 492 aaKnown RBP7.96□□□□□ -1.14
SMARCB1-207ENST00000491967 COPG1Q9Y678 874 aaKnown RBP7.96□□□□□ -1.14
SMARCB1-207ENST00000491967 PCNX1Q96RV3 2341 aa7.96□□□□□ -1.14
SMARCB1-207ENST00000491967 CREBBPQ92793 2442 aa7.95□□□□□ -1.14
SMARCB1-207ENST00000491967 CELSR2Q9HCU4 2923 aa7.95□□□□□ -1.14
SMARCB1-207ENST00000491967 IGHV1-45A0A0A0MS14 117 aa7.95□□□□□ -1.14
SMARCB1-207ENST00000491967 CTAGE9A4FU28 777 aa7.95□□□□□ -1.14
SMARCB1-207ENST00000491967 ANKUB1A6NFN9 424 aa7.95□□□□□ -1.14
SMARCB1-207ENST00000491967 E5RI56 91 aa7.95□□□□□ -1.14
SMARCB1-207ENST00000491967 H0YIG0 161 aa7.95□□□□□ -1.14
SMARCB1-207ENST00000491967 GOLGA8MH3BSY2 632 aa7.95□□□□□ -1.14
SMARCB1-207ENST00000491967 SMAPO00193 183 aa7.95□□□□□ -1.14
SMARCB1-207ENST00000491967 PGRMC1O00264 195 aaKnown RBP7.95□□□□□ -1.14
SMARCB1-207ENST00000491967 E2F3O00716 465 aa7.95□□□□□ -1.14
SMARCB1-207ENST00000491967 SLC16A5O15375 505 aa7.95□□□□□ -1.14
SMARCB1-207ENST00000491967 P2RX6O15547 441 aa7.95□□□□□ -1.14
SMARCB1-207ENST00000491967 PRPF4O43172 522 aaKnown RBP eCLIP7.95□□□□□ -1.14
SMARCB1-207ENST00000491967 ZBTB14O43829 449 aa7.95□□□□□ -1.14
SMARCB1-207ENST00000491967 ALOX12BO75342 701 aa7.95□□□□□ -1.14
SMARCB1-207ENST00000491967 VPS26AO75436 327 aa7.95□□□□□ -1.14
SMARCB1-207ENST00000491967 BMP10O95393 424 aa7.95□□□□□ -1.14
SMARCB1-207ENST00000491967 TTC4O95801 387 aa7.95□□□□□ -1.14
SMARCB1-207ENST00000491967 TSPAN12O95859 305 aa7.95□□□□□ -1.14
SMARCB1-207ENST00000491967 F7P08709 466 aaPredicted RBP7.95□□□□□ -1.14
SMARCB1-207ENST00000491967 PRR35P0CG20 571 aa7.95□□□□□ -1.14
SMARCB1-207ENST00000491967 FBLP22087 321 aaKnown RBP7.95□□□□□ -1.14
SMARCB1-207ENST00000491967 EMP2P54851 167 aa7.95□□□□□ -1.14
SMARCB1-207ENST00000491967 CUL1Q13616 776 aa7.95□□□□□ -1.14
SMARCB1-207ENST00000491967 THOC5Q13769 683 aaKnown RBP7.95□□□□□ -1.14
SMARCB1-207ENST00000491967 FRG1Q14331 258 aaKnown RBP7.95□□□□□ -1.14
SMARCB1-207ENST00000491967 ZNF169Q14929 603 aaPredicted RBP7.95□□□□□ -1.14
SMARCB1-207ENST00000491967 TLR1Q15399 786 aa7.95□□□□□ -1.14
SMARCB1-207ENST00000491967 NR6A1Q15406 480 aa7.95□□□□□ -1.14
SMARCB1-207ENST00000491967 HIF1AQ16665 826 aa7.95□□□□□ -1.14
SMARCB1-207ENST00000491967 HKDC1Q2TB90 917 aa7.95□□□□□ -1.14
SMARCB1-207ENST00000491967 HSP90AA5PQ58FG0 334 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms