RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 RUVBL1Q9Y265 456 aaKnown RBP18.85■□□□□ 0.61
SMC4-222ENST00000490207 VWA7Q9Y334 891 aa18.85■□□□□ 0.61
SMC4-222ENST00000490207 PSAT1Q9Y617 370 aa18.85■□□□□ 0.61
SMC4-222ENST00000490207 A6NL46 340 aa18.84■□□□□ 0.61
SMC4-222ENST00000490207 IGHEP01854 428 aa18.84■□□□□ 0.61
SMC4-222ENST00000490207 CSRP3P50461 194 aa18.84■□□□□ 0.61
SMC4-222ENST00000490207 EMP3P54852 163 aa18.84■□□□□ 0.61
SMC4-222ENST00000490207 RELAQ04206 551 aa18.84■□□□□ 0.61
SMC4-222ENST00000490207 HKDC1Q2TB90 917 aa18.84■□□□□ 0.61
SMC4-222ENST00000490207 PRMT9Q6P2P2 845 aa18.84■□□□□ 0.61
SMC4-222ENST00000490207 AGTRAPQ6RW13 159 aa18.84■□□□□ 0.61
SMC4-222ENST00000490207 CAPN12Q6ZSI9 719 aa18.84■□□□□ 0.61
SMC4-222ENST00000490207 STRA8Q7Z7C7 330 aa18.84■□□□□ 0.61
SMC4-222ENST00000490207 SLC26A11Q86WA9 606 aa18.84■□□□□ 0.61
SMC4-222ENST00000490207 FDCSPQ8NFU4 85 aa18.84■□□□□ 0.61
SMC4-222ENST00000490207 COL26A1Q96A83 441 aa18.84■□□□□ 0.61
SMC4-222ENST00000490207 OR2A5Q96R48 311 aa18.84■□□□□ 0.61
SMC4-222ENST00000490207 NUDT9Q9BW91 350 aa18.84■□□□□ 0.61
SMC4-222ENST00000490207 SOX17Q9H6I2 414 aaPredicted RBP18.84■□□□□ 0.61
SMC4-222ENST00000490207 P4HTMQ9NXG6 502 aa18.84■□□□□ 0.61
SMC4-222ENST00000490207 NSMCE4AQ9NXX6 385 aa18.84■□□□□ 0.61
SMC4-222ENST00000490207 GPR83Q9NYM4 423 aa18.84■□□□□ 0.61
SMC4-222ENST00000490207 MOCS1Q9NZB8 636 aa18.84■□□□□ 0.61
SMC4-222ENST00000490207 ZNF451Q9Y4E5 1061 aa18.84■□□□□ 0.61
SMC4-222ENST00000490207 PCDHGB7Q9Y5F8 929 aa18.84■□□□□ 0.61
SMC4-222ENST00000490207 FAM95CA0A1B0GW59 222 aa18.83■□□□□ 0.6
SMC4-222ENST00000490207 H7BY64 318 aa18.83■□□□□ 0.6
SMC4-222ENST00000490207 HIST1H2AGP0C0S8 130 aaPredicted RBP18.83■□□□□ 0.6
SMC4-222ENST00000490207 HIST1H2ADP20671 130 aa18.83■□□□□ 0.6
SMC4-222ENST00000490207 FBLP22087 321 aaKnown RBP18.83■□□□□ 0.6
SMC4-222ENST00000490207 KCNC4Q03721 635 aa18.83■□□□□ 0.6
SMC4-222ENST00000490207 CBLBQ13191 982 aa18.83■□□□□ 0.6
SMC4-222ENST00000490207 DCAF10Q5QP82 559 aa18.83■□□□□ 0.6
SMC4-222ENST00000490207 ZC3HC1Q86WB0 502 aaKnown RBP18.83■□□□□ 0.6
SMC4-222ENST00000490207 PLD3Q8IV08 490 aa18.83■□□□□ 0.6
SMC4-222ENST00000490207 CLEC1AQ8NC01 280 aa18.83■□□□□ 0.6
SMC4-222ENST00000490207 ALKBH8Q96BT7 664 aaKnown RBP18.83■□□□□ 0.6
SMC4-222ENST00000490207 HIST1H2AHQ96KK5 128 aa18.83■□□□□ 0.6
SMC4-222ENST00000490207 PRAP1Q96NZ9 151 aa18.83■□□□□ 0.6
SMC4-222ENST00000490207 HIST1H2AJQ99878 128 aa18.83■□□□□ 0.6
SMC4-222ENST00000490207 H2AFJQ9BTM1 129 aa18.83■□□□□ 0.6
SMC4-222ENST00000490207 ATG10Q9H0Y0 220 aa18.83■□□□□ 0.6
SMC4-222ENST00000490207 CLMPQ9H6B4 373 aa18.83■□□□□ 0.6
SMC4-222ENST00000490207 SAYSD1Q9NPB0 183 aa18.83■□□□□ 0.6
SMC4-222ENST00000490207 CDC23Q9UJX2 597 aa18.83■□□□□ 0.6
SMC4-222ENST00000490207 EIF3HO15372 352 aaKnown RBP eCLIP18.82■□□□□ 0.6
SMC4-222ENST00000490207 P2RX6O15547 441 aa18.82■□□□□ 0.6
SMC4-222ENST00000490207 ZNF37AP17032 561 aaPredicted RBP18.82■□□□□ 0.6
SMC4-222ENST00000490207 SAT1P21673 171 aa18.82■□□□□ 0.6
SMC4-222ENST00000490207 MMP11P24347 488 aa18.82■□□□□ 0.6
SMC4-222ENST00000490207 CCND1P24385 295 aa18.82■□□□□ 0.6
SMC4-222ENST00000490207 HRH2P25021 359 aa18.82■□□□□ 0.6
SMC4-222ENST00000490207 AP1S2P56377 157 aa18.82■□□□□ 0.6
SMC4-222ENST00000490207 NAE1Q13564 534 aa18.82■□□□□ 0.6
SMC4-222ENST00000490207 RAPSNQ13702 412 aa18.82■□□□□ 0.6
SMC4-222ENST00000490207 DUPD1Q68J44 220 aa18.82■□□□□ 0.6
SMC4-222ENST00000490207 LCTLQ6UWM7 567 aa18.82■□□□□ 0.6
SMC4-222ENST00000490207 SHISA6Q6ZSJ9 500 aa18.82■□□□□ 0.6
SMC4-222ENST00000490207 C17orf64Q86WR6 236 aa18.82■□□□□ 0.6
SMC4-222ENST00000490207 PYROXD1Q8WU10 500 aa18.82■□□□□ 0.6
SMC4-222ENST00000490207 MVB12AQ96EY5 273 aa18.82■□□□□ 0.6
SMC4-222ENST00000490207 TRIM54Q9BYV2 358 aa18.82■□□□□ 0.6
SMC4-222ENST00000490207 TMEM184CQ9NVA4 438 aa18.82■□□□□ 0.6
SMC4-222ENST00000490207 ARL15Q9NXU5 204 aa18.82■□□□□ 0.6
SMC4-222ENST00000490207 GRHL1Q9NZI5 618 aa18.82■□□□□ 0.6
SMC4-222ENST00000490207 SH2B3Q9UQQ2 575 aa18.82■□□□□ 0.6
SMC4-222ENST00000490207 UTP11Q9Y3A2 253 aaKnown RBP18.82■□□□□ 0.6
SMC4-222ENST00000490207 VSTM2BA6NLU5 285 aa18.81■□□□□ 0.6
SMC4-222ENST00000490207 AGPSO00116 658 aa18.81■□□□□ 0.6
SMC4-222ENST00000490207 TXNDC9O14530 226 aa18.81■□□□□ 0.6
SMC4-222ENST00000490207 PRPF4O43172 522 aaKnown RBP eCLIP18.81■□□□□ 0.6
SMC4-222ENST00000490207 ENO2P09104 434 aaPredicted RBP18.81■□□□□ 0.6
SMC4-222ENST00000490207 RPS15AP62244 130 aaKnown RBP18.81■□□□□ 0.6
SMC4-222ENST00000490207 OCA2Q04671 838 aa18.81■□□□□ 0.6
SMC4-222ENST00000490207 ZNF460Q14592 562 aa18.81■□□□□ 0.6
SMC4-222ENST00000490207 RBBP7Q16576 425 aa18.81■□□□□ 0.6
SMC4-222ENST00000490207 GARNL3Q5VVW2 1013 aa18.81■□□□□ 0.6
SMC4-222ENST00000490207 GALNT16Q8N428 558 aa18.81■□□□□ 0.6
SMC4-222ENST00000490207 STT3BQ8TCJ2 826 aa18.81■□□□□ 0.6
SMC4-222ENST00000490207 NACC2Q96BF6 587 aa18.81■□□□□ 0.6
SMC4-222ENST00000490207 MIEF2Q96C03 454 aa18.81■□□□□ 0.6
SMC4-222ENST00000490207 SGPP1Q9BX95 441 aa18.81■□□□□ 0.6
SMC4-222ENST00000490207 RAB17Q9H0T7 212 aa18.81■□□□□ 0.6
SMC4-222ENST00000490207 RHOJQ9H4E5 214 aa18.81■□□□□ 0.6
SMC4-222ENST00000490207 ZNF282Q9UDV7 671 aaPredicted RBP18.81■□□□□ 0.6
SMC4-222ENST00000490207 CDC14AQ9UNH5 594 aa18.81■□□□□ 0.6
SMC4-222ENST00000490207 SOCS6O14544 535 aa18.8■□□□□ 0.6
SMC4-222ENST00000490207 DPM1O60762 260 aa18.8■□□□□ 0.6
SMC4-222ENST00000490207 SSTR1P30872 391 aa18.8■□□□□ 0.6
SMC4-222ENST00000490207 CSNK1G2P78368 415 aa18.8■□□□□ 0.6
SMC4-222ENST00000490207 VWA5B1Q5TIE3 1220 aa18.8■□□□□ 0.6
SMC4-222ENST00000490207 CAPN13Q6MZZ7 669 aaPredicted RBP18.8■□□□□ 0.6
SMC4-222ENST00000490207 SBSNQ6UWP8 590 aa18.8■□□□□ 0.6
SMC4-222ENST00000490207 ZNF572Q7Z3I7 529 aaPredicted RBP18.8■□□□□ 0.6
SMC4-222ENST00000490207 HPS6Q86YV9 775 aa18.8■□□□□ 0.6
SMC4-222ENST00000490207 PDLIM5Q96HC4 596 aaKnown RBP18.8■□□□□ 0.6
SMC4-222ENST00000490207 VPS39Q96JC1 886 aa18.8■□□□□ 0.6
SMC4-222ENST00000490207 SMAD5Q99717 465 aaKnown RBP18.8■□□□□ 0.6
SMC4-222ENST00000490207 CRB3Q9BUF7 120 aa18.8■□□□□ 0.6
SMC4-222ENST00000490207 DRC3Q9H069 523 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms