RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 SDC3O75056 442 aa2.8□□□□□ -1.96
UBXN4-208ENST00000490163 PROP1O75360 226 aa2.8□□□□□ -1.96
UBXN4-208ENST00000490163 CDKL5O76039 1030 aa2.8□□□□□ -1.96
UBXN4-208ENST00000490163 CT45A8P0DMV1 189 aa2.8□□□□□ -1.96
UBXN4-208ENST00000490163 CT45A9P0DMV2 189 aa2.8□□□□□ -1.96
UBXN4-208ENST00000490163 ETFAP13804 333 aa2.8□□□□□ -1.96
UBXN4-208ENST00000490163 GP9P14770 177 aa2.8□□□□□ -1.96
UBXN4-208ENST00000490163 GM2AP17900 193 aa2.8□□□□□ -1.96
UBXN4-208ENST00000490163 IL4RP24394 825 aa2.8□□□□□ -1.96
UBXN4-208ENST00000490163 ETV1P50549 477 aa2.8□□□□□ -1.96
UBXN4-208ENST00000490163 PGGT1BP53609 377 aa2.8□□□□□ -1.96
UBXN4-208ENST00000490163 RCN2Q14257 317 aa2.8□□□□□ -1.96
UBXN4-208ENST00000490163 INPP5JQ15735 1006 aaPredicted RBP2.8□□□□□ -1.96
UBXN4-208ENST00000490163 CD300EQ496F6 205 aaPredicted RBP2.8□□□□□ -1.96
UBXN4-208ENST00000490163 CT45A2Q5DJT8 189 aa2.8□□□□□ -1.96
UBXN4-208ENST00000490163 IGSF11Q5DX21 431 aa2.8□□□□□ -1.96
UBXN4-208ENST00000490163 DCST1Q5T197 706 aa2.8□□□□□ -1.96
UBXN4-208ENST00000490163 ZDHHC20Q5W0Z9 365 aa2.8□□□□□ -1.96
UBXN4-208ENST00000490163 KRT40Q6A162 431 aa2.8□□□□□ -1.96
UBXN4-208ENST00000490163 ETFRF1Q6IPR1 90 aa2.8□□□□□ -1.96
UBXN4-208ENST00000490163 NIPAL3Q6P499 406 aa2.8□□□□□ -1.96
UBXN4-208ENST00000490163 TAF8Q7Z7C8 310 aa2.8□□□□□ -1.96
UBXN4-208ENST00000490163 KLBQ86Z14 1044 aa2.8□□□□□ -1.96
UBXN4-208ENST00000490163 LIPHQ8WWY8 451 aa2.8□□□□□ -1.96
UBXN4-208ENST00000490163 ESAMQ96AP7 390 aa2.8□□□□□ -1.96
UBXN4-208ENST00000490163 MOB3AQ96BX8 217 aa2.8□□□□□ -1.96
UBXN4-208ENST00000490163 LRRC37BQ96QE4 947 aa2.8□□□□□ -1.96
UBXN4-208ENST00000490163 ZBTB18Q99592 522 aa2.8□□□□□ -1.96
UBXN4-208ENST00000490163 JPH2Q9BR39 696 aaPredicted RBP2.8□□□□□ -1.96
UBXN4-208ENST00000490163 KRT23Q9C075 422 aa2.8□□□□□ -1.96
UBXN4-208ENST00000490163 CRLF2Q9HC73 371 aa2.8□□□□□ -1.96
UBXN4-208ENST00000490163 APMAPQ9HDC9 416 aa2.8□□□□□ -1.96
UBXN4-208ENST00000490163 KIF13BQ9NQT8 1826 aa2.8□□□□□ -1.96
UBXN4-208ENST00000490163 FAM240BA0A1B0GVZ2 78 aa2.8□□□□□ -1.96
UBXN4-208ENST00000490163 A0A1W2PNV4 684 aa2.8□□□□□ -1.96
UBXN4-208ENST00000490163 KCNN4O15554 427 aa2.8□□□□□ -1.96
UBXN4-208ENST00000490163 SPOPO43791 374 aa2.8□□□□□ -1.96
UBXN4-208ENST00000490163 CRYGBP07316 175 aa2.8□□□□□ -1.96
UBXN4-208ENST00000490163 MMP3P08254 477 aa2.8□□□□□ -1.96
UBXN4-208ENST00000490163 H2AFXP16104 143 aaPredicted RBP2.8□□□□□ -1.96
UBXN4-208ENST00000490163 HRH2P25021 359 aa2.8□□□□□ -1.96
UBXN4-208ENST00000490163 DDX6P26196 483 aaKnown RBP eCLIP2.8□□□□□ -1.96
UBXN4-208ENST00000490163 GSTM2P28161 218 aa2.8□□□□□ -1.96
UBXN4-208ENST00000490163 TNFRSF4P43489 277 aa2.8□□□□□ -1.96
UBXN4-208ENST00000490163 MAZP56270 477 aaKnown RBP2.8□□□□□ -1.96
UBXN4-208ENST00000490163 CETN1Q12798 172 aa2.8□□□□□ -1.96
UBXN4-208ENST00000490163 SLC15A2Q16348 729 aa2.8□□□□□ -1.96
UBXN4-208ENST00000490163 HSP90B2PQ58FF3 399 aa2.8□□□□□ -1.96
UBXN4-208ENST00000490163 CYB5D1Q6P9G0 228 aa2.8□□□□□ -1.96
UBXN4-208ENST00000490163 ZNF367Q7RTV3 350 aa2.8□□□□□ -1.96
UBXN4-208ENST00000490163 SLC16A9Q7RTY1 509 aa2.8□□□□□ -1.96
UBXN4-208ENST00000490163 SLC22A16Q86VW1 577 aa2.8□□□□□ -1.96
UBXN4-208ENST00000490163 BATF2Q8N1L9 274 aa2.8□□□□□ -1.96
UBXN4-208ENST00000490163 CD99L2Q8TCZ2 262 aa2.8□□□□□ -1.96
UBXN4-208ENST00000490163 GANCQ8TET4 914 aa2.8□□□□□ -1.96
UBXN4-208ENST00000490163 METTL21AQ8WXB1 218 aa2.8□□□□□ -1.96
UBXN4-208ENST00000490163 THOC1Q96FV9 657 aaKnown RBP2.8□□□□□ -1.96
UBXN4-208ENST00000490163 FAM20AQ96MK3 541 aa2.8□□□□□ -1.96
UBXN4-208ENST00000490163 TSSK2Q96PF2 358 aa2.8□□□□□ -1.96
UBXN4-208ENST00000490163 TGS1Q96RS0 853 aaKnown RBP2.8□□□□□ -1.96
UBXN4-208ENST00000490163 IFIH1Q9BYX4 1025 aaKnown RBP2.8□□□□□ -1.96
UBXN4-208ENST00000490163 GOLPH3LQ9H4A5 285 aa2.8□□□□□ -1.96
UBXN4-208ENST00000490163 DPEP3Q9H4B8 488 aa2.8□□□□□ -1.96
UBXN4-208ENST00000490163 LRRC40Q9H9A6 602 aa2.8□□□□□ -1.96
UBXN4-208ENST00000490163 RNPEPL1Q9HAU8 725 aa2.8□□□□□ -1.96
UBXN4-208ENST00000490163 SMOXQ9NWM0 555 aa2.8□□□□□ -1.96
UBXN4-208ENST00000490163 B9D1Q9UPM9 204 aa2.8□□□□□ -1.96
UBXN4-208ENST00000490163 ELP1O95163 1332 aa2.8□□□□□ -1.96
UBXN4-208ENST00000490163 ATP10DQ9P241 1426 aa2.79□□□□□ -1.96
UBXN4-208ENST00000490163 A0A0U1RQV5 110 aa2.79□□□□□ -1.96
UBXN4-208ENST00000490163 C5orf60A6NFR6 353 aa2.79□□□□□ -1.96
UBXN4-208ENST00000490163 CFAP73A6NFT4 308 aa2.79□□□□□ -1.96
UBXN4-208ENST00000490163 SRRM4A7MD48 611 aaKnown RBP2.79□□□□□ -1.96
UBXN4-208ENST00000490163 BTN3A3O00478 584 aa2.79□□□□□ -1.96
UBXN4-208ENST00000490163 TTI1O43156 1089 aa2.79□□□□□ -1.96
UBXN4-208ENST00000490163 PGLSO95336 258 aa2.79□□□□□ -1.96
UBXN4-208ENST00000490163 WNT11O96014 354 aa2.79□□□□□ -1.96
UBXN4-208ENST00000490163 RLN1P04808 185 aa2.79□□□□□ -1.96
UBXN4-208ENST00000490163 ENO3P13929 434 aaPredicted RBP2.79□□□□□ -1.96
UBXN4-208ENST00000490163 AKR1A1P14550 325 aa2.79□□□□□ -1.96
UBXN4-208ENST00000490163 MPZP25189 248 aa2.79□□□□□ -1.96
UBXN4-208ENST00000490163 PRPHP41219 470 aa2.79□□□□□ -1.96
UBXN4-208ENST00000490163 MAGEA8P43361 318 aa2.79□□□□□ -1.96
UBXN4-208ENST00000490163 SULT1E1P49888 294 aa2.79□□□□□ -1.96
UBXN4-208ENST00000490163 DOC2BQ14184 412 aa2.79□□□□□ -1.96
UBXN4-208ENST00000490163 SYT14P1Q58G82 188 aa2.79□□□□□ -1.96
UBXN4-208ENST00000490163 TCTE1Q5JU00 501 aa2.79□□□□□ -1.96
UBXN4-208ENST00000490163 GGNBP1Q5YKI7 109 aa2.79□□□□□ -1.96
UBXN4-208ENST00000490163 TCTN3Q6NUS6 607 aa2.79□□□□□ -1.96
UBXN4-208ENST00000490163 PPP1R21Q6ZMI0 780 aa2.79□□□□□ -1.96
UBXN4-208ENST00000490163 ZNF813Q6ZN06 617 aa2.79□□□□□ -1.96
UBXN4-208ENST00000490163 ARMCX2Q7L311 632 aa2.79□□□□□ -1.96
UBXN4-208ENST00000490163 KRTAP19-1Q8IUB9 90 aa2.79□□□□□ -1.96
UBXN4-208ENST00000490163 SERPINA12Q8IW75 414 aa2.79□□□□□ -1.96
UBXN4-208ENST00000490163 CPSF7Q8N684 471 aaKnown RBP2.79□□□□□ -1.96
UBXN4-208ENST00000490163 OR4C5Q8NGB2 326 aa2.79□□□□□ -1.96
UBXN4-208ENST00000490163 TBC1D16Q8TBP0 767 aa2.79□□□□□ -1.96
UBXN4-208ENST00000490163 R3HDM4Q96D70 268 aa2.79□□□□□ -1.96
UBXN4-208ENST00000490163 ZNF48Q96MX3 618 aaPredicted RBP2.79□□□□□ -1.96
UBXN4-208ENST00000490163 GSDMAQ96QA5 445 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms