RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 VEZF1Q14119 521 aa2.97□□□□□ -1.93
HMGN1-218ENST00000490032 TRIM29Q14134 588 aa2.97□□□□□ -1.93
HMGN1-218ENST00000490032 FAM182AQ5T1J6 154 aa2.97□□□□□ -1.93
HMGN1-218ENST00000490032 ZNF841Q6ZN19 808 aa2.97□□□□□ -1.93
HMGN1-218ENST00000490032 APPL2Q8NEU8 664 aa2.97□□□□□ -1.93
HMGN1-218ENST00000490032 PIK3R3Q92569 461 aa2.97□□□□□ -1.93
HMGN1-218ENST00000490032 PTERQ96BW5 349 aa2.97□□□□□ -1.93
HMGN1-218ENST00000490032 MOB3AQ96BX8 217 aa2.97□□□□□ -1.93
HMGN1-218ENST00000490032 ZNF830Q96NB3 372 aaPredicted RBP2.97□□□□□ -1.93
HMGN1-218ENST00000490032 BARD1Q99728 777 aaKnown RBP2.97□□□□□ -1.93
HMGN1-218ENST00000490032 NAP1L4Q99733 375 aaKnown RBP2.97□□□□□ -1.93
HMGN1-218ENST00000490032 GOLPH3LQ9H4A5 285 aa2.97□□□□□ -1.93
HMGN1-218ENST00000490032 GPN1Q9HCN4 374 aaPredicted RBP2.97□□□□□ -1.93
HMGN1-218ENST00000490032 PDE7BQ9NP56 450 aa2.97□□□□□ -1.93
HMGN1-218ENST00000490032 LNPEPQ9UIQ6 1025 aa2.97□□□□□ -1.93
HMGN1-218ENST00000490032 PRDM4Q9UKN5 801 aa2.97□□□□□ -1.93
HMGN1-218ENST00000490032 PA2G4Q9UQ80 394 aaKnown RBP2.97□□□□□ -1.93
HMGN1-218ENST00000490032 NOTCH2Q04721 2471 aa2.96□□□□□ -1.94
HMGN1-218ENST00000490032 A0A1W2PPK0 400 aa2.96□□□□□ -1.94
HMGN1-218ENST00000490032 CASTOR2A6NHX0 329 aa2.96□□□□□ -1.94
HMGN1-218ENST00000490032 POP4O95707 220 aaKnown RBP2.96□□□□□ -1.94
HMGN1-218ENST00000490032 CD27P26842 260 aa2.96□□□□□ -1.94
HMGN1-218ENST00000490032 EIF2DP41214 584 aaKnown RBP2.96□□□□□ -1.94
HMGN1-218ENST00000490032 LHX1P48742 406 aa2.96□□□□□ -1.94
HMGN1-218ENST00000490032 CLNS1AP54105 237 aaKnown RBP2.96□□□□□ -1.94
HMGN1-218ENST00000490032 CLDN15P56746 228 aa2.96□□□□□ -1.94
HMGN1-218ENST00000490032 UBXN2AP68543 259 aa2.96□□□□□ -1.94
HMGN1-218ENST00000490032 TRAP1Q12931 704 aaKnown RBP2.96□□□□□ -1.94
HMGN1-218ENST00000490032 STK4Q13043 487 aa2.96□□□□□ -1.94
HMGN1-218ENST00000490032 SPECC1Q5M775 1068 aa2.96□□□□□ -1.94
HMGN1-218ENST00000490032 C3P1Q6ZMU1 363 aa2.96□□□□□ -1.94
HMGN1-218ENST00000490032 CDHR3Q6ZTQ4 885 aa2.96□□□□□ -1.94
HMGN1-218ENST00000490032 FCRLAQ7L513 359 aa2.96□□□□□ -1.94
HMGN1-218ENST00000490032 CHMP1BQ7LBR1 199 aa2.96□□□□□ -1.94
HMGN1-218ENST00000490032 DNAAF5Q86Y56 855 aa2.96□□□□□ -1.94
HMGN1-218ENST00000490032 KLHDC1Q8N7A1 406 aa2.96□□□□□ -1.94
HMGN1-218ENST00000490032 OR10G7Q8NGN6 311 aa2.96□□□□□ -1.94
HMGN1-218ENST00000490032 JAKMIP2Q96AA8 810 aa2.96□□□□□ -1.94
HMGN1-218ENST00000490032 SDF4Q9BRK5 362 aa2.96□□□□□ -1.94
HMGN1-218ENST00000490032 OLAHQ9NV23 265 aa2.96□□□□□ -1.94
HMGN1-218ENST00000490032 HAO2Q9NYQ3 351 aa2.96□□□□□ -1.94
HMGN1-218ENST00000490032 MRPL15Q9P015 296 aaKnown RBP2.96□□□□□ -1.94
HMGN1-218ENST00000490032 ELF5Q9UKW6 265 aaPredicted RBP2.96□□□□□ -1.94
HMGN1-218ENST00000490032 SELENOKQ9Y6D0 94 aa2.96□□□□□ -1.94
HMGN1-218ENST00000490032 RPS6KL1Q9Y6S9 549 aa2.96□□□□□ -1.94
HMGN1-218ENST00000490032 RALGAPA1Q6GYQ0 2036 aa2.96□□□□□ -1.94
HMGN1-218ENST00000490032 IGSF1Q8N6C5 1336 aa2.95□□□□□ -1.94
HMGN1-218ENST00000490032 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP2.95□□□□□ -1.94
HMGN1-218ENST00000490032 TRIM77I1YAP6 450 aa2.95□□□□□ -1.94
HMGN1-218ENST00000490032 PHOX2AO14813 284 aa2.95□□□□□ -1.94
HMGN1-218ENST00000490032 NXPH4O95158 308 aa2.95□□□□□ -1.94
HMGN1-218ENST00000490032 PGM3O95394 542 aa2.95□□□□□ -1.94
HMGN1-218ENST00000490032 DUX4L4P0CJ87 422 aa2.95□□□□□ -1.94
HMGN1-218ENST00000490032 PAX3P23760 479 aa2.95□□□□□ -1.94
HMGN1-218ENST00000490032 OXTRP30559 389 aa2.95□□□□□ -1.94
HMGN1-218ENST00000490032 FCHO2Q0JRZ9 810 aa2.95□□□□□ -1.94
HMGN1-218ENST00000490032 ZNF177Q13360 481 aaPredicted RBP2.95□□□□□ -1.94
HMGN1-218ENST00000490032 NPTX1Q15818 432 aa2.95□□□□□ -1.94
HMGN1-218ENST00000490032 FAM189A2Q15884 450 aa2.95□□□□□ -1.94
HMGN1-218ENST00000490032 MS4A18Q3C1V0 323 aa2.95□□□□□ -1.94
HMGN1-218ENST00000490032 RILPL1Q5EBL4 403 aa2.95□□□□□ -1.94
HMGN1-218ENST00000490032 GARNL3Q5VVW2 1013 aa2.95□□□□□ -1.94
HMGN1-218ENST00000490032 SLC25A42Q86VD7 318 aa2.95□□□□□ -1.94
HMGN1-218ENST00000490032 SYT2Q8N9I0 419 aaPredicted RBP2.95□□□□□ -1.94
HMGN1-218ENST00000490032 EVI5LQ96CN4 794 aa2.95□□□□□ -1.94
HMGN1-218ENST00000490032 PSMB7Q99436 277 aa2.95□□□□□ -1.94
HMGN1-218ENST00000490032 NOL11Q9H8H0 719 aaKnown RBP2.95□□□□□ -1.94
HMGN1-218ENST00000490032 TMEM5Q9Y2B1 443 aa2.95□□□□□ -1.94
HMGN1-218ENST00000490032 IGLV4-3A0A075B6K6 122 aa2.94□□□□□ -1.94
HMGN1-218ENST00000490032 TRBV4-1A0A0J9YWV2 114 aa2.94□□□□□ -1.94
HMGN1-218ENST00000490032 ANKRD18BA2A2Z9 1011 aa2.94□□□□□ -1.94
HMGN1-218ENST00000490032 A8MV72 311 aaPredicted RBP2.94□□□□□ -1.94
HMGN1-218ENST00000490032 SHISA9B4DS77 424 aa2.94□□□□□ -1.94
HMGN1-218ENST00000490032 TLX2O43763 284 aaPredicted RBP2.94□□□□□ -1.94
HMGN1-218ENST00000490032 GPRIN2O60269 458 aa2.94□□□□□ -1.94
HMGN1-218ENST00000490032 CSN3P07498 182 aa2.94□□□□□ -1.94
HMGN1-218ENST00000490032 SAGP10523 405 aaPredicted RBP2.94□□□□□ -1.94
HMGN1-218ENST00000490032 GP9P14770 177 aa2.94□□□□□ -1.94
HMGN1-218ENST00000490032 EPCAMP16422 314 aa2.94□□□□□ -1.94
HMGN1-218ENST00000490032 ASCL1P50553 236 aa2.94□□□□□ -1.94
HMGN1-218ENST00000490032 CLCN4P51793 760 aa2.94□□□□□ -1.94
HMGN1-218ENST00000490032 GEMIN4P57678 1058 aaKnown RBP2.94□□□□□ -1.94
HMGN1-218ENST00000490032 DHODHQ02127 395 aa2.94□□□□□ -1.94
HMGN1-218ENST00000490032 NOA1Q8NC60 698 aaKnown RBP2.94□□□□□ -1.94
HMGN1-218ENST00000490032 DGAT2Q96PD7 388 aa2.94□□□□□ -1.94
HMGN1-218ENST00000490032 FEVQ99581 238 aa2.94□□□□□ -1.94
HMGN1-218ENST00000490032 CDCA3Q99618 268 aaPredicted RBP2.94□□□□□ -1.94
HMGN1-218ENST00000490032 ATF6BQ99941 703 aa2.94□□□□□ -1.94
HMGN1-218ENST00000490032 CHCHD5Q9BSY4 110 aa2.94□□□□□ -1.94
HMGN1-218ENST00000490032 GPR88Q9GZN0 384 aa2.94□□□□□ -1.94
HMGN1-218ENST00000490032 CDH20Q9HBT6 801 aa2.94□□□□□ -1.94
HMGN1-218ENST00000490032 GTSE1Q9NYZ3 720 aa2.94□□□□□ -1.94
HMGN1-218ENST00000490032 SLC24A2Q9UI40 661 aa2.94□□□□□ -1.94
HMGN1-218ENST00000490032 RNF150Q9ULK6 438 aa2.94□□□□□ -1.94
HMGN1-218ENST00000490032 PCDHGB4Q9UN71 923 aa2.94□□□□□ -1.94
HMGN1-218ENST00000490032 PPIEQ9UNP9 301 aaKnown RBP2.94□□□□□ -1.94
HMGN1-218ENST00000490032 SURF4O15260 269 aa2.93□□□□□ -1.94
HMGN1-218ENST00000490032 GALR3O60755 368 aaPredicted RBP2.93□□□□□ -1.94
HMGN1-218ENST00000490032 MELTFP08582 738 aa2.93□□□□□ -1.94
HMGN1-218ENST00000490032 CD22P20273 847 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms