RNA–Protein interactions for RNA: ENST00000489741.1

PRPF40A-210, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-210ENST00000489741 CAPRIN2Q6IMN6 1127 aaKnown RBP6.18□□□□□ -1.42
PRPF40A-210ENST00000489741 CCDC70Q6NSX1 233 aa6.18□□□□□ -1.42
PRPF40A-210ENST00000489741 IRGCQ6NXR0 463 aa6.18□□□□□ -1.42
PRPF40A-210ENST00000489741 CYB5D1Q6P9G0 228 aa6.18□□□□□ -1.42
PRPF40A-210ENST00000489741 FAM199XQ6PEV8 388 aaPredicted RBP6.18□□□□□ -1.42
PRPF40A-210ENST00000489741 TMEM220Q6QAJ8 160 aa6.18□□□□□ -1.42
PRPF40A-210ENST00000489741 CERS6Q6ZMG9 384 aa6.18□□□□□ -1.42
PRPF40A-210ENST00000489741 BZW1Q7L1Q6 419 aaKnown RBP6.18□□□□□ -1.42
PRPF40A-210ENST00000489741 TRAPPC5Q8IUR0 188 aa6.18□□□□□ -1.42
PRPF40A-210ENST00000489741 LURAP1LQ8IV03 231 aa6.18□□□□□ -1.42
PRPF40A-210ENST00000489741 RHOT2Q8IXI1 618 aa6.18□□□□□ -1.42
PRPF40A-210ENST00000489741 TEX19Q8NA77 164 aa6.18□□□□□ -1.42
PRPF40A-210ENST00000489741 SIDT2Q8NBJ9 832 aaKnown RBP6.18□□□□□ -1.42
PRPF40A-210ENST00000489741 SLC38A9Q8NBW4 561 aa6.18□□□□□ -1.42
PRPF40A-210ENST00000489741 GPR150Q8NGU9 434 aa6.18□□□□□ -1.42
PRPF40A-210ENST00000489741 TFB1MQ8WVM0 346 aaKnown RBP6.18□□□□□ -1.42
PRPF40A-210ENST00000489741 THAP4Q8WY91 577 aa6.18□□□□□ -1.42
PRPF40A-210ENST00000489741 ZNF501Q96CX3 271 aaPredicted RBP6.18□□□□□ -1.42
PRPF40A-210ENST00000489741 RNF31Q96EP0 1072 aa6.18□□□□□ -1.42
PRPF40A-210ENST00000489741 OXNAD1Q96HP4 312 aaPredicted RBP6.18□□□□□ -1.42
PRPF40A-210ENST00000489741 ELMO2Q96JJ3 720 aa6.18□□□□□ -1.42
PRPF40A-210ENST00000489741 ZNF514Q96K75 400 aaPredicted RBP6.18□□□□□ -1.42
PRPF40A-210ENST00000489741 LINC00615Q96LM1 132 aaPredicted RBP6.18□□□□□ -1.42
PRPF40A-210ENST00000489741 LRFN5Q96NI6 719 aa6.18□□□□□ -1.42
PRPF40A-210ENST00000489741 FCRL5Q96RD9 977 aa6.18□□□□□ -1.42
PRPF40A-210ENST00000489741 CD180Q99467 661 aa6.18□□□□□ -1.42
PRPF40A-210ENST00000489741 CHP1Q99653 195 aa6.18□□□□□ -1.42
PRPF40A-210ENST00000489741 MAK16Q9BXY0 300 aaKnown RBP6.18□□□□□ -1.42
PRPF40A-210ENST00000489741 TWSG1Q9GZX9 223 aa6.18□□□□□ -1.42
PRPF40A-210ENST00000489741 ACTL8Q9H568 366 aa6.18□□□□□ -1.42
PRPF40A-210ENST00000489741 PDE7BQ9NP56 450 aa6.18□□□□□ -1.42
PRPF40A-210ENST00000489741 FGF21Q9NSA1 209 aa6.18□□□□□ -1.42
PRPF40A-210ENST00000489741 SMOXQ9NWM0 555 aa6.18□□□□□ -1.42
PRPF40A-210ENST00000489741 ING3Q9NXR8 418 aa6.18□□□□□ -1.42
PRPF40A-210ENST00000489741 DDX56Q9NY93 547 aaKnown RBP6.18□□□□□ -1.42
PRPF40A-210ENST00000489741 HACD3Q9P035 362 aa6.18□□□□□ -1.42
PRPF40A-210ENST00000489741 TRIM10Q9UDY6 481 aa6.18□□□□□ -1.42
PRPF40A-210ENST00000489741 LNPEPQ9UIQ6 1025 aa6.18□□□□□ -1.42
PRPF40A-210ENST00000489741 RARRES3Q9UL19 164 aa6.18□□□□□ -1.42
PRPF40A-210ENST00000489741 PCDHGA9Q9Y5G4 932 aaKnown RBP6.18□□□□□ -1.42
PRPF40A-210ENST00000489741 CELSR2Q9HCU4 2923 aa6.18□□□□□ -1.42
PRPF40A-210ENST00000489741 MYO9AB2RTY4 2548 aa6.18□□□□□ -1.42
PRPF40A-210ENST00000489741 SEC16AO15027 2179 aa6.17□□□□□ -1.42
PRPF40A-210ENST00000489741 DOPEY1Q5JWR5 2465 aa6.17□□□□□ -1.42
PRPF40A-210ENST00000489741 ICE1Q9Y2F5 2266 aa6.17□□□□□ -1.42
PRPF40A-210ENST00000489741 KRTAP23-1A1A580 65 aa6.17□□□□□ -1.42
PRPF40A-210ENST00000489741 SYCE3A1L190 88 aa6.17□□□□□ -1.42
PRPF40A-210ENST00000489741 KLHL33A6NCF5 533 aa6.17□□□□□ -1.42
PRPF40A-210ENST00000489741 MGAT4DA6NG13 374 aa6.17□□□□□ -1.42
PRPF40A-210ENST00000489741 TLCD2A6NGC4 264 aa6.17□□□□□ -1.42
PRPF40A-210ENST00000489741 GPR39O43194 453 aa6.17□□□□□ -1.42
PRPF40A-210ENST00000489741 CST8O60676 142 aa6.17□□□□□ -1.42
PRPF40A-210ENST00000489741 DNAJB5O75953 348 aa6.17□□□□□ -1.42
PRPF40A-210ENST00000489741 CAPN1P07384 714 aa6.17□□□□□ -1.42
PRPF40A-210ENST00000489741 CLEC2LP0C7M8 214 aa6.17□□□□□ -1.42
PRPF40A-210ENST00000489741 EBLN1P0CF75 366 aa6.17□□□□□ -1.42
PRPF40A-210ENST00000489741 MTHFD1P11586 935 aaKnown RBP6.17□□□□□ -1.42
PRPF40A-210ENST00000489741 PECAM1P16284 738 aaPredicted RBP6.17□□□□□ -1.42
PRPF40A-210ENST00000489741 HLA-DPA1P20036 260 aa6.17□□□□□ -1.42
PRPF40A-210ENST00000489741 ADRA1AP35348 466 aa6.17□□□□□ -1.42
PRPF40A-210ENST00000489741 SPAM1P38567 509 aa6.17□□□□□ -1.42
PRPF40A-210ENST00000489741 HALP42357 657 aa6.17□□□□□ -1.42
PRPF40A-210ENST00000489741 MAN2A2P49641 1150 aa6.17□□□□□ -1.42
PRPF40A-210ENST00000489741 HADHBP55084 474 aaKnown RBP6.17□□□□□ -1.42
PRPF40A-210ENST00000489741 TUBB4BP68371 445 aa6.17□□□□□ -1.42
PRPF40A-210ENST00000489741 HSD11B2P80365 405 aa6.17□□□□□ -1.42
PRPF40A-210ENST00000489741 XIAPP98170 497 aa6.17□□□□□ -1.42
PRPF40A-210ENST00000489741 CD69Q07108 199 aa6.17□□□□□ -1.42
PRPF40A-210ENST00000489741 TUBB3Q13509 450 aa6.17□□□□□ -1.42
PRPF40A-210ENST00000489741 TUBB2AQ13885 445 aa6.17□□□□□ -1.42
PRPF40A-210ENST00000489741 TFDP2Q14188 446 aa6.17□□□□□ -1.42
PRPF40A-210ENST00000489741 NFE2L1Q14494 772 aa6.17□□□□□ -1.42
PRPF40A-210ENST00000489741 KCNAB1Q14722 419 aa6.17□□□□□ -1.42
PRPF40A-210ENST00000489741 ZNF658BQ4V348 819 aaPredicted RBP6.17□□□□□ -1.42
PRPF40A-210ENST00000489741 BCL7AQ4VC05 210 aa6.17□□□□□ -1.42
PRPF40A-210ENST00000489741 PLEKHS1Q5SXH7 462 aa6.17□□□□□ -1.42
PRPF40A-210ENST00000489741 GPRC6AQ5T6X5 926 aa6.17□□□□□ -1.42
PRPF40A-210ENST00000489741 LCN10Q6JVE6 187 aa6.17□□□□□ -1.42
PRPF40A-210ENST00000489741 KLHL35Q6PF15 583 aa6.17□□□□□ -1.42
PRPF40A-210ENST00000489741 FAM151BQ6UXP7 276 aa6.17□□□□□ -1.42
PRPF40A-210ENST00000489741 RANBP10Q6VN20 620 aa6.17□□□□□ -1.42
PRPF40A-210ENST00000489741 Q6ZRM9 215 aa6.17□□□□□ -1.42
PRPF40A-210ENST00000489741 SYVN1Q86TM6 617 aa6.17□□□□□ -1.42
PRPF40A-210ENST00000489741 RFX6Q8HWS3 928 aa6.17□□□□□ -1.42
PRPF40A-210ENST00000489741 RHOT1Q8IXI2 618 aa6.17□□□□□ -1.42
PRPF40A-210ENST00000489741 ZNF567Q8N184 647 aa6.17□□□□□ -1.42
PRPF40A-210ENST00000489741 OR2L2Q8NH16 312 aa6.17□□□□□ -1.42
PRPF40A-210ENST00000489741 OR8K5Q8NH50 307 aa6.17□□□□□ -1.42
PRPF40A-210ENST00000489741 ZNF398Q8TD17 642 aa6.17□□□□□ -1.42
PRPF40A-210ENST00000489741 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.17□□□□□ -1.42
PRPF40A-210ENST00000489741 TTC25Q96NG3 672 aa6.17□□□□□ -1.42
PRPF40A-210ENST00000489741 VAT1Q99536 393 aa6.17□□□□□ -1.42
PRPF40A-210ENST00000489741 TTC1Q99614 292 aa6.17□□□□□ -1.42
PRPF40A-210ENST00000489741 C19orf43Q9BQ61 176 aa6.17□□□□□ -1.42
PRPF40A-210ENST00000489741 TUBB2BQ9BVA1 445 aa6.17□□□□□ -1.42
PRPF40A-210ENST00000489741 KIR3DX1Q9H7L2 352 aa6.17□□□□□ -1.42
PRPF40A-210ENST00000489741 IFT22Q9H7X7 185 aa6.17□□□□□ -1.42
PRPF40A-210ENST00000489741 NHEJ1Q9H9Q4 299 aaPredicted RBP6.17□□□□□ -1.42
PRPF40A-210ENST00000489741 PARPBPQ9NWS1 579 aa6.17□□□□□ -1.42
PRPF40A-210ENST00000489741 HRASLS2Q9NWW9 162 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms