RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 SPATA19Q7Z5L4 167 aa13.63□□□□□ -0.23
VPS26A-205ENST00000489656 SFTPA2Q8IWL1 248 aa13.63□□□□□ -0.23
VPS26A-205ENST00000489656 KRT78Q8N1N4 520 aa13.63□□□□□ -0.23
VPS26A-205ENST00000489656 SLC25A45Q8N413 288 aa13.63□□□□□ -0.23
VPS26A-205ENST00000489656 ARL14Q8N4G2 192 aa13.63□□□□□ -0.23
VPS26A-205ENST00000489656 OR2L3Q8NG85 312 aa13.63□□□□□ -0.23
VPS26A-205ENST00000489656 OR7G3Q8NG95 312 aa13.63□□□□□ -0.23
VPS26A-205ENST00000489656 FLVCR1-AS1Q8TAF5 88 aa13.63□□□□□ -0.23
VPS26A-205ENST00000489656 PRR11Q96HE9 360 aaPredicted RBP13.63□□□□□ -0.23
VPS26A-205ENST00000489656 METTL2AQ96IZ6 378 aaKnown RBP13.63□□□□□ -0.23
VPS26A-205ENST00000489656 PPP3R2Q96LZ3 170 aa13.63□□□□□ -0.23
VPS26A-205ENST00000489656 AIF1LQ9BQI0 150 aa13.63□□□□□ -0.23
VPS26A-205ENST00000489656 ACAT2Q9BWD1 397 aa13.63□□□□□ -0.23
VPS26A-205ENST00000489656 FARSBQ9NSD9 589 aaKnown RBP13.63□□□□□ -0.23
VPS26A-205ENST00000489656 UCKL1Q9NWZ5 548 aa13.63□□□□□ -0.23
VPS26A-205ENST00000489656 SPHK1Q9NYA1 384 aa13.63□□□□□ -0.23
VPS26A-205ENST00000489656 ADGRE2Q9UHX3 823 aa13.63□□□□□ -0.23
VPS26A-205ENST00000489656 A0A0C4DFX4 3053 aa13.63□□□□□ -0.23
VPS26A-205ENST00000489656 USP34Q70CQ2 3546 aa13.63□□□□□ -0.23
VPS26A-205ENST00000489656 CROCCQ5TZA2 2017 aa13.63□□□□□ -0.23
VPS26A-205ENST00000489656 ERICH4A6NGS2 130 aa13.62□□□□□ -0.23
VPS26A-205ENST00000489656 PRR33A8MZF0 331 aa13.62□□□□□ -0.23
VPS26A-205ENST00000489656 FOXE1O00358 373 aaPredicted RBP13.62□□□□□ -0.23
VPS26A-205ENST00000489656 SDC3O75056 442 aa13.62□□□□□ -0.23
VPS26A-205ENST00000489656 RSL1D1O76021 490 aaKnown RBP13.62□□□□□ -0.23
VPS26A-205ENST00000489656 UBOX5O94941 541 aa13.62□□□□□ -0.23
VPS26A-205ENST00000489656 EPN2O95208 641 aa13.62□□□□□ -0.23
VPS26A-205ENST00000489656 GIMD1P0DJR0 217 aa13.62□□□□□ -0.23
VPS26A-205ENST00000489656 NCF2P19878 526 aaPredicted RBP13.62□□□□□ -0.23
VPS26A-205ENST00000489656 CMPK1P30085 196 aa13.62□□□□□ -0.23
VPS26A-205ENST00000489656 SERPINB1P30740 379 aa13.62□□□□□ -0.23
VPS26A-205ENST00000489656 PIK3CBP42338 1070 aa13.62□□□□□ -0.23
VPS26A-205ENST00000489656 ERVK-8P63133 956 aa13.62□□□□□ -0.23
VPS26A-205ENST00000489656 DEFB133Q30KQ1 61 aa13.62□□□□□ -0.23
VPS26A-205ENST00000489656 C14orf28Q4W4Y0 310 aa13.62□□□□□ -0.23
VPS26A-205ENST00000489656 ATP6AP1LQ52LC2 224 aa13.62□□□□□ -0.23
VPS26A-205ENST00000489656 LACTB2Q53H82 288 aaPredicted RBP13.62□□□□□ -0.23
VPS26A-205ENST00000489656 C6orf136Q5SQH8 315 aa13.62□□□□□ -0.23
VPS26A-205ENST00000489656 TMEM198Q66K66 360 aa13.62□□□□□ -0.23
VPS26A-205ENST00000489656 SCIMPQ6UWF3 145 aa13.62□□□□□ -0.23
VPS26A-205ENST00000489656 JPH3Q8WXH2 748 aaPredicted RBP13.62□□□□□ -0.23
VPS26A-205ENST00000489656 TUBB6Q9BUF5 446 aa13.62□□□□□ -0.23
VPS26A-205ENST00000489656 SARGQ9BW04 601 aa13.62□□□□□ -0.23
VPS26A-205ENST00000489656 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.62□□□□□ -0.23
VPS26A-205ENST00000489656 ACPTQ9BZG2 426 aa13.62□□□□□ -0.23
VPS26A-205ENST00000489656 SPNS1Q9H2V7 528 aa13.62□□□□□ -0.23
VPS26A-205ENST00000489656 RHBGQ9H310 441 aa13.62□□□□□ -0.23
VPS26A-205ENST00000489656 MRPS30Q9NP92 439 aaKnown RBP13.62□□□□□ -0.23
VPS26A-205ENST00000489656 TMEM184CQ9NVA4 438 aa13.62□□□□□ -0.23
VPS26A-205ENST00000489656 CUEDC1Q9NWM3 386 aaPredicted RBP13.62□□□□□ -0.23
VPS26A-205ENST00000489656 ASIC5Q9NY37 505 aa13.62□□□□□ -0.23
VPS26A-205ENST00000489656 SLC6A14Q9UN76 642 aa13.62□□□□□ -0.23
VPS26A-205ENST00000489656 PCDHGA5Q9Y5G8 931 aa13.62□□□□□ -0.23
VPS26A-205ENST00000489656 KLK4Q9Y5K2 254 aa13.62□□□□□ -0.23
VPS26A-205ENST00000489656 RP1P56715 2156 aa13.62□□□□□ -0.23
VPS26A-205ENST00000489656 DNAH14Q0VDD8 3507 aa13.61□□□□□ -0.23
VPS26A-205ENST00000489656 IGKV1-8A0A0C4DH67 115 aa13.61□□□□□ -0.23
VPS26A-205ENST00000489656 C2orf72A6NCS6 295 aa13.61□□□□□ -0.23
VPS26A-205ENST00000489656 ISM1B1AKI9 464 aa13.61□□□□□ -0.23
VPS26A-205ENST00000489656 PPM1DO15297 605 aa13.61□□□□□ -0.23
VPS26A-205ENST00000489656 ALDOCP09972 364 aaKnown RBP13.61□□□□□ -0.23
VPS26A-205ENST00000489656 ACPPP15309 386 aa13.61□□□□□ -0.23
VPS26A-205ENST00000489656 PCSK2P16519 638 aa13.61□□□□□ -0.23
VPS26A-205ENST00000489656 GSTM2P28161 218 aa13.61□□□□□ -0.23
VPS26A-205ENST00000489656 MAZP56270 477 aaKnown RBP13.61□□□□□ -0.23
VPS26A-205ENST00000489656 YBX1P67809 324 aaKnown RBP13.61□□□□□ -0.23
VPS26A-205ENST00000489656 CSNK1G2P78368 415 aa13.61□□□□□ -0.23
VPS26A-205ENST00000489656 FOXK1P85037 733 aa13.61□□□□□ -0.23
VPS26A-205ENST00000489656 EMX2Q04743 252 aa13.61□□□□□ -0.23
VPS26A-205ENST00000489656 BNIP1Q12981 228 aa13.61□□□□□ -0.23
VPS26A-205ENST00000489656 BNIP3Q12983 259 aa13.61□□□□□ -0.23
VPS26A-205ENST00000489656 MAD2L1Q13257 205 aaPredicted RBP13.61□□□□□ -0.23
VPS26A-205ENST00000489656 UBAP2LQ14157 1087 aaKnown RBP13.61□□□□□ -0.23
VPS26A-205ENST00000489656 SQLEQ14534 574 aa13.61□□□□□ -0.23
VPS26A-205ENST00000489656 NAA25Q14CX7 972 aa13.61□□□□□ -0.23
VPS26A-205ENST00000489656 NR6A1Q15406 480 aa13.61□□□□□ -0.23
VPS26A-205ENST00000489656 SF1Q15637 639 aaKnown RBP13.61□□□□□ -0.23
VPS26A-205ENST00000489656 GSTA3Q16772 222 aa13.61□□□□□ -0.23
VPS26A-205ENST00000489656 IMPG1Q17R60 797 aa13.61□□□□□ -0.23
VPS26A-205ENST00000489656 SLC5A12Q1EHB4 618 aa13.61□□□□□ -0.23
VPS26A-205ENST00000489656 HLA-BQ31612 363 aa13.61□□□□□ -0.23
VPS26A-205ENST00000489656 ZNF425Q6IV72 752 aa13.61□□□□□ -0.23
VPS26A-205ENST00000489656 TMIGD1Q6UXZ0 262 aa13.61□□□□□ -0.23
VPS26A-205ENST00000489656 PRR23BQ6ZRT6 265 aa13.61□□□□□ -0.23
VPS26A-205ENST00000489656 PARP9Q8IXQ6 854 aa13.61□□□□□ -0.23
VPS26A-205ENST00000489656 HUS1BQ8NHY5 278 aa13.61□□□□□ -0.23
VPS26A-205ENST00000489656 CMTM7Q96FZ5 175 aa13.61□□□□□ -0.23
VPS26A-205ENST00000489656 CATSPER2Q96P56 530 aa13.61□□□□□ -0.23
VPS26A-205ENST00000489656 OR2A14Q96R47 310 aa13.61□□□□□ -0.23
VPS26A-205ENST00000489656 HBEGFQ99075 208 aa13.61□□□□□ -0.23
VPS26A-205ENST00000489656 SLC6A20Q9NP91 592 aa13.61□□□□□ -0.23
VPS26A-205ENST00000489656 TMEM45AQ9NWC5 275 aa13.61□□□□□ -0.23
VPS26A-205ENST00000489656 C1orf109Q9NX04 203 aa13.61□□□□□ -0.23
VPS26A-205ENST00000489656 NLGN3Q9NZ94 848 aa13.61□□□□□ -0.23
VPS26A-205ENST00000489656 ARMCX1Q9P291 453 aa13.61□□□□□ -0.23
VPS26A-205ENST00000489656 ANKMY1Q9P2S6 941 aa13.61□□□□□ -0.23
VPS26A-205ENST00000489656 COPG1Q9Y678 874 aaKnown RBP13.61□□□□□ -0.23
VPS26A-205ENST00000489656 CAPN7Q9Y6W3 813 aa13.61□□□□□ -0.23
VPS26A-205ENST00000489656 UNC13CQ8NB66 2214 aa13.61□□□□□ -0.23
VPS26A-205ENST00000489656 TRBC2A0A5B9 178 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms