RNA–Protein interactions for RNA: ENST00000489303.1

LMO4-203, Transcript of LIM domain only 4, humanhuman

TSL 2

Gene LMO4, Length 952 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-203ENST00000489303 FOXK1P85037 733 aa12.9□□□□□ -0.34
LMO4-203ENST00000489303 RELAQ04206 551 aa12.9□□□□□ -0.34
LMO4-203ENST00000489303 NAE1Q13564 534 aa12.9□□□□□ -0.34
LMO4-203ENST00000489303 CAPN13Q6MZZ7 669 aaPredicted RBP12.9□□□□□ -0.34
LMO4-203ENST00000489303 TCTN3Q6NUS6 607 aa12.9□□□□□ -0.34
LMO4-203ENST00000489303 MRPL14Q6P1L8 145 aaKnown RBP12.9□□□□□ -0.34
LMO4-203ENST00000489303 PRMT9Q6P2P2 845 aa12.9□□□□□ -0.34
LMO4-203ENST00000489303 C3orf62Q6ZUJ4 267 aa12.9□□□□□ -0.34
LMO4-203ENST00000489303 CYS1Q717R9 158 aa12.9□□□□□ -0.34
LMO4-203ENST00000489303 MED25Q71SY5 747 aa12.9□□□□□ -0.34
LMO4-203ENST00000489303 OVCH1Q7RTY7 1134 aa12.9□□□□□ -0.34
LMO4-203ENST00000489303 C17orf64Q86WR6 236 aa12.9□□□□□ -0.34
LMO4-203ENST00000489303 SPNS2Q8IVW8 549 aa12.9□□□□□ -0.34
LMO4-203ENST00000489303 LRRC56Q8IYG6 542 aaPredicted RBP12.9□□□□□ -0.34
LMO4-203ENST00000489303 OR4N4Q8N0Y3 316 aa12.9□□□□□ -0.34
LMO4-203ENST00000489303 CSNK1A1LQ8N752 337 aa12.9□□□□□ -0.34
LMO4-203ENST00000489303 TMEM102Q8N9M5 508 aaPredicted RBP12.9□□□□□ -0.34
LMO4-203ENST00000489303 MNS1Q8NEH6 495 aa12.9□□□□□ -0.34
LMO4-203ENST00000489303 OR2Y1Q8NGV0 311 aa12.9□□□□□ -0.34
LMO4-203ENST00000489303 ADAMTS17Q8TE56 1095 aa12.9□□□□□ -0.34
LMO4-203ENST00000489303 TRIM44Q96DX7 344 aaPredicted RBP12.9□□□□□ -0.34
LMO4-203ENST00000489303 TSPAN17Q96FV3 270 aa12.9□□□□□ -0.34
LMO4-203ENST00000489303 PDLIM5Q96HC4 596 aaKnown RBP12.9□□□□□ -0.34
LMO4-203ENST00000489303 CABS1Q96KC9 395 aa12.9□□□□□ -0.34
LMO4-203ENST00000489303 TRIM55Q9BYV6 548 aa12.9□□□□□ -0.34
LMO4-203ENST00000489303 ATG10Q9H0Y0 220 aa12.9□□□□□ -0.34
LMO4-203ENST00000489303 ZNF304Q9HCX3 659 aa12.9□□□□□ -0.34
LMO4-203ENST00000489303 TMEM184CQ9NVA4 438 aa12.9□□□□□ -0.34
LMO4-203ENST00000489303 TLK1Q9UKI8 766 aa12.9□□□□□ -0.34
LMO4-203ENST00000489303 NXT1Q9UKK6 140 aaKnown RBP12.9□□□□□ -0.34
LMO4-203ENST00000489303 PSAT1Q9Y617 370 aa12.9□□□□□ -0.34
LMO4-203ENST00000489303 PTPN13Q12923 2485 aa12.9□□□□□ -0.34
LMO4-203ENST00000489303 TNRC6AQ8NDV7 1962 aaKnown RBP12.9□□□□□ -0.34
LMO4-203ENST00000489303 DOPEY2Q9Y3R5 2298 aa12.89□□□□□ -0.35
LMO4-203ENST00000489303 H7BY64 318 aa12.89□□□□□ -0.35
LMO4-203ENST00000489303 KLF7O75840 302 aaPredicted RBP12.89□□□□□ -0.35
LMO4-203ENST00000489303 TSPAN12O95859 305 aa12.89□□□□□ -0.35
LMO4-203ENST00000489303 ZNF37AP17032 561 aaPredicted RBP12.89□□□□□ -0.35
LMO4-203ENST00000489303 ITGAXP20702 1163 aa12.89□□□□□ -0.35
LMO4-203ENST00000489303 GCGRP47871 477 aa12.89□□□□□ -0.35
LMO4-203ENST00000489303 CCL11P51671 97 aa12.89□□□□□ -0.35
LMO4-203ENST00000489303 MLLT10P55197 1068 aa12.89□□□□□ -0.35
LMO4-203ENST00000489303 POU4F1Q01851 419 aa12.89□□□□□ -0.35
LMO4-203ENST00000489303 OCA2Q04671 838 aa12.89□□□□□ -0.35
LMO4-203ENST00000489303 NDUFA9Q16795 377 aa12.89□□□□□ -0.35
LMO4-203ENST00000489303 PHKG1Q16816 387 aa12.89□□□□□ -0.35
LMO4-203ENST00000489303 FAM69BQ5VUD6 431 aa12.89□□□□□ -0.35
LMO4-203ENST00000489303 GARNL3Q5VVW2 1013 aa12.89□□□□□ -0.35
LMO4-203ENST00000489303 ZNF425Q6IV72 752 aa12.89□□□□□ -0.35
LMO4-203ENST00000489303 LCTLQ6UWM7 567 aa12.89□□□□□ -0.35
LMO4-203ENST00000489303 CEP128Q6ZU80 1094 aa12.89□□□□□ -0.35
LMO4-203ENST00000489303 CTAGE3PQ8IX95 158 aa12.89□□□□□ -0.35
LMO4-203ENST00000489303 FBXO25Q8TCJ0 367 aa12.89□□□□□ -0.35
LMO4-203ENST00000489303 ANKRD7Q92527 254 aa12.89□□□□□ -0.35
LMO4-203ENST00000489303 NACC2Q96BF6 587 aa12.89□□□□□ -0.35
LMO4-203ENST00000489303 VPS50Q96JG6 964 aa12.89□□□□□ -0.35
LMO4-203ENST00000489303 FER1L6-AS2Q96M78 137 aa12.89□□□□□ -0.35
LMO4-203ENST00000489303 PRAP1Q96NZ9 151 aa12.89□□□□□ -0.35
LMO4-203ENST00000489303 CPNE1Q99829 537 aa12.89□□□□□ -0.35
LMO4-203ENST00000489303 HAUS8Q9BT25 410 aa12.89□□□□□ -0.35
LMO4-203ENST00000489303 WDR54Q9H977 334 aa12.89□□□□□ -0.35
LMO4-203ENST00000489303 POPDC3Q9HBV1 291 aa12.89□□□□□ -0.35
LMO4-203ENST00000489303 GPAMQ9HCL2 828 aa12.89□□□□□ -0.35
LMO4-203ENST00000489303 NOVA2Q9UNW9 492 aaKnown RBP12.89□□□□□ -0.35
LMO4-203ENST00000489303 SPTBP11277 2137 aa12.88□□□□□ -0.35
LMO4-203ENST00000489303 IGKV1-8A0A0C4DH67 115 aa12.88□□□□□ -0.35
LMO4-203ENST00000489303 TCRBV9S1A1TA0A576 114 aa12.88□□□□□ -0.35
LMO4-203ENST00000489303 NRP2O60462 931 aa12.88□□□□□ -0.35
LMO4-203ENST00000489303 GUCA1CO95843 209 aa12.88□□□□□ -0.35
LMO4-203ENST00000489303 ONECUT2O95948 504 aa12.88□□□□□ -0.35
LMO4-203ENST00000489303 STX2P32856 288 aa12.88□□□□□ -0.35
LMO4-203ENST00000489303 GP5P40197 560 aa12.88□□□□□ -0.35
LMO4-203ENST00000489303 MAGEA4P43358 317 aa12.88□□□□□ -0.35
LMO4-203ENST00000489303 OR1D4P47884 311 aa12.88□□□□□ -0.35
LMO4-203ENST00000489303 TAS2R39P59534 338 aa12.88□□□□□ -0.35
LMO4-203ENST00000489303 RPS15AP62244 130 aaKnown RBP12.88□□□□□ -0.35
LMO4-203ENST00000489303 SLC7A5Q01650 507 aa12.88□□□□□ -0.35
LMO4-203ENST00000489303 CHAF1BQ13112 559 aa12.88□□□□□ -0.35
LMO4-203ENST00000489303 ATP1A4Q13733 1029 aa12.88□□□□□ -0.35
LMO4-203ENST00000489303 PRTGQ2VWP7 1150 aa12.88□□□□□ -0.35
LMO4-203ENST00000489303 MBOAT1Q6ZNC8 495 aa12.88□□□□□ -0.35
LMO4-203ENST00000489303 ASB18Q6ZVZ8 466 aa12.88□□□□□ -0.35
LMO4-203ENST00000489303 FRA10AC1Q70Z53 315 aa12.88□□□□□ -0.35
LMO4-203ENST00000489303 TBC1D19Q8N5T2 526 aa12.88□□□□□ -0.35
LMO4-203ENST00000489303 METTL27Q8N6F8 245 aaPredicted RBP12.88□□□□□ -0.35
LMO4-203ENST00000489303 CLEC1AQ8NC01 280 aa12.88□□□□□ -0.35
LMO4-203ENST00000489303 FBXL8Q96CD0 374 aa12.88□□□□□ -0.35
LMO4-203ENST00000489303 THAP11Q96EK4 314 aa12.88□□□□□ -0.35
LMO4-203ENST00000489303 MVB12AQ96EY5 273 aa12.88□□□□□ -0.35
LMO4-203ENST00000489303 OR2A5Q96R48 311 aa12.88□□□□□ -0.35
LMO4-203ENST00000489303 LRRC1Q9BTT6 524 aa12.88□□□□□ -0.35
LMO4-203ENST00000489303 SLC25A23Q9BV35 468 aa12.88□□□□□ -0.35
LMO4-203ENST00000489303 SLC26A1Q9H2B4 701 aa12.88□□□□□ -0.35
LMO4-203ENST00000489303 CUEDC1Q9NWM3 386 aaPredicted RBP12.88□□□□□ -0.35
LMO4-203ENST00000489303 CTNNAL1Q9UBT7 734 aa12.88□□□□□ -0.35
LMO4-203ENST00000489303 ANAPC2Q9UJX6 822 aa12.88□□□□□ -0.35
LMO4-203ENST00000489303 MAU2Q9Y6X3 613 aa12.88□□□□□ -0.35
LMO4-203ENST00000489303 NBASA2RRP1 2371 aa12.87□□□□□ -0.35
LMO4-203ENST00000489303 CTAGE15A4D2H0 777 aa12.87□□□□□ -0.35
LMO4-203ENST00000489303 HAT1O14929 419 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms