RNA–Protein interactions for RNA: ENST00000489130.2

SRRM1-216, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-216ENST00000489130 CUEDC1Q9NWM3 386 aaPredicted RBP11.96□□□□□ -0.49
SRRM1-216ENST00000489130 STOX2Q9P2F5 926 aaPredicted RBP11.96□□□□□ -0.49
SRRM1-216ENST00000489130 ADAMTS6Q9UKP5 1117 aa11.96□□□□□ -0.49
SRRM1-216ENST00000489130 VPS4AQ9UN37 437 aa11.96□□□□□ -0.49
SRRM1-216ENST00000489130 PDE10AQ9Y233 779 aa11.96□□□□□ -0.49
SRRM1-216ENST00000489130 SAR1BQ9Y6B6 198 aa11.96□□□□□ -0.49
SRRM1-216ENST00000489130 TEX264Q9Y6I9 313 aa11.96□□□□□ -0.49
SRRM1-216ENST00000489130 NUP210LQ5VU65 1888 aa11.95□□□□□ -0.5
SRRM1-216ENST00000489130 TXNDC9O14530 226 aa11.95□□□□□ -0.5
SRRM1-216ENST00000489130 HAT1O14929 419 aa11.95□□□□□ -0.5
SRRM1-216ENST00000489130 TP73O15350 636 aa11.95□□□□□ -0.5
SRRM1-216ENST00000489130 SLC16A5O15375 505 aa11.95□□□□□ -0.5
SRRM1-216ENST00000489130 PRPF4O43172 522 aaKnown RBP eCLIP11.95□□□□□ -0.5
SRRM1-216ENST00000489130 SEC31AO94979 1220 aaKnown RBP11.95□□□□□ -0.5
SRRM1-216ENST00000489130 FBLP22087 321 aaKnown RBP11.95□□□□□ -0.5
SRRM1-216ENST00000489130 HRH2P25021 359 aa11.95□□□□□ -0.5
SRRM1-216ENST00000489130 VARSP26640 1264 aaKnown RBP11.95□□□□□ -0.5
SRRM1-216ENST00000489130 SLC26A3P40879 764 aa11.95□□□□□ -0.5
SRRM1-216ENST00000489130 ELK3P41970 407 aa11.95□□□□□ -0.5
SRRM1-216ENST00000489130 OCA2Q04671 838 aa11.95□□□□□ -0.5
SRRM1-216ENST00000489130 KLC1Q07866 573 aa11.95□□□□□ -0.5
SRRM1-216ENST00000489130 FRG1Q14331 258 aaKnown RBP11.95□□□□□ -0.5
SRRM1-216ENST00000489130 INPP5JQ15735 1006 aaPredicted RBP11.95□□□□□ -0.5
SRRM1-216ENST00000489130 RBBP7Q16576 425 aa11.95□□□□□ -0.5
SRRM1-216ENST00000489130 HIF1AQ16665 826 aa11.95□□□□□ -0.5
SRRM1-216ENST00000489130 TUBB8Q3ZCM7 444 aa11.95□□□□□ -0.5
SRRM1-216ENST00000489130 PRR30Q53SZ7 412 aaPredicted RBP11.95□□□□□ -0.5
SRRM1-216ENST00000489130 TEDDM1Q5T9Z0 273 aa11.95□□□□□ -0.5
SRRM1-216ENST00000489130 THEMIS2Q5TEJ8 643 aa11.95□□□□□ -0.5
SRRM1-216ENST00000489130 STEAP4Q687X5 459 aa11.95□□□□□ -0.5
SRRM1-216ENST00000489130 PAQR3Q6TCH7 311 aa11.95□□□□□ -0.5
SRRM1-216ENST00000489130 ADCK2Q7Z695 626 aa11.95□□□□□ -0.5
SRRM1-216ENST00000489130 KLHL7Q8IXQ5 586 aa11.95□□□□□ -0.5
SRRM1-216ENST00000489130 MYO1HQ8N1T3 1032 aa11.95□□□□□ -0.5
SRRM1-216ENST00000489130 FAM26EQ8N5C1 309 aa11.95□□□□□ -0.5
SRRM1-216ENST00000489130 OR11G2Q8NGC1 345 aa11.95□□□□□ -0.5
SRRM1-216ENST00000489130 MCOLN3Q8TDD5 553 aa11.95□□□□□ -0.5
SRRM1-216ENST00000489130 TM9SF4Q92544 642 aa11.95□□□□□ -0.5
SRRM1-216ENST00000489130 MIEF2Q96C03 454 aa11.95□□□□□ -0.5
SRRM1-216ENST00000489130 VPS50Q96JG6 964 aa11.95□□□□□ -0.5
SRRM1-216ENST00000489130 CRB3Q9BUF7 120 aa11.95□□□□□ -0.5
SRRM1-216ENST00000489130 PCBD2Q9H0N5 130 aa11.95□□□□□ -0.5
SRRM1-216ENST00000489130 PARVBQ9HBI1 364 aa11.95□□□□□ -0.5
SRRM1-216ENST00000489130 LUZP4Q9P127 313 aa11.95□□□□□ -0.5
SRRM1-216ENST00000489130 SLC17A6Q9P2U8 582 aa11.95□□□□□ -0.5
SRRM1-216ENST00000489130 C3orf18Q9UK00 162 aa11.95□□□□□ -0.5
SRRM1-216ENST00000489130 CORO1CQ9ULV4 474 aaPredicted RBP11.95□□□□□ -0.5
SRRM1-216ENST00000489130 CDC14AQ9UNH5 594 aa11.95□□□□□ -0.5
SRRM1-216ENST00000489130 B3GNT3Q9Y2A9 372 aa11.95□□□□□ -0.5
SRRM1-216ENST00000489130 KCNE1BA0A087WTH5 132 aa11.94□□□□□ -0.5
SRRM1-216ENST00000489130 H7BY64 318 aa11.94□□□□□ -0.5
SRRM1-216ENST00000489130 CCDC188H7C350 402 aa11.94□□□□□ -0.5
SRRM1-216ENST00000489130 P2RX6O15547 441 aa11.94□□□□□ -0.5
SRRM1-216ENST00000489130 FOXS1O43638 330 aa11.94□□□□□ -0.5
SRRM1-216ENST00000489130 ALOX12BO75342 701 aa11.94□□□□□ -0.5
SRRM1-216ENST00000489130 TSPAN12O95859 305 aa11.94□□□□□ -0.5
SRRM1-216ENST00000489130 ITGA3P26006 1051 aa11.94□□□□□ -0.5
SRRM1-216ENST00000489130 UQCRFS1P47985 274 aa11.94□□□□□ -0.5
SRRM1-216ENST00000489130 FAM53BQ14153 422 aa11.94□□□□□ -0.5
SRRM1-216ENST00000489130 PLEKHN1Q494U1 663 aaPredicted RBP11.94□□□□□ -0.5
SRRM1-216ENST00000489130 VWA2Q5GFL6 755 aa11.94□□□□□ -0.5
SRRM1-216ENST00000489130 TRMT10BQ6PF06 316 aaKnown RBP11.94□□□□□ -0.5
SRRM1-216ENST00000489130 IGFL2Q6UWQ7 119 aa11.94□□□□□ -0.5
SRRM1-216ENST00000489130 MBOAT1Q6ZNC8 495 aa11.94□□□□□ -0.5
SRRM1-216ENST00000489130 Q6ZS92 163 aa11.94□□□□□ -0.5
SRRM1-216ENST00000489130 PALM2Q8IXS6 379 aa11.94□□□□□ -0.5
SRRM1-216ENST00000489130 AMER3Q8N944 861 aa11.94□□□□□ -0.5
SRRM1-216ENST00000489130 ANP32BQ92688 251 aaKnown RBP11.94□□□□□ -0.5
SRRM1-216ENST00000489130 LINGO1Q96FE5 620 aa11.94□□□□□ -0.5
SRRM1-216ENST00000489130 CFAP36Q96G28 342 aa11.94□□□□□ -0.5
SRRM1-216ENST00000489130 PWWP2AQ96N64 755 aa11.94□□□□□ -0.5
SRRM1-216ENST00000489130 PRAP1Q96NZ9 151 aa11.94□□□□□ -0.5
SRRM1-216ENST00000489130 TRIM51Q9BSJ1 452 aa11.94□□□□□ -0.5
SRRM1-216ENST00000489130 TGIF2Q9GZN2 237 aa11.94□□□□□ -0.5
SRRM1-216ENST00000489130 DRC3Q9H069 523 aa11.94□□□□□ -0.5
SRRM1-216ENST00000489130 ZBTB20Q9HC78 741 aaPredicted RBP11.94□□□□□ -0.5
SRRM1-216ENST00000489130 PPANQ9NQ55 473 aaKnown RBP11.94□□□□□ -0.5
SRRM1-216ENST00000489130 ABCF3Q9NUQ8 709 aa11.94□□□□□ -0.5
SRRM1-216ENST00000489130 TMEM184CQ9NVA4 438 aa11.94□□□□□ -0.5
SRRM1-216ENST00000489130 C14orf105Q9NVL8 296 aa11.94□□□□□ -0.5
SRRM1-216ENST00000489130 PYCARDQ9ULZ3 195 aa11.94□□□□□ -0.5
SRRM1-216ENST00000489130 CHMP2BQ9UQN3 213 aa11.94□□□□□ -0.5
SRRM1-216ENST00000489130 CCDC88CQ9P219 2028 aa11.94□□□□□ -0.5
SRRM1-216ENST00000489130 FLNCQ14315 2725 aa11.94□□□□□ -0.5
SRRM1-216ENST00000489130 NBASA2RRP1 2371 aa11.93□□□□□ -0.5
SRRM1-216ENST00000489130 COL12A1Q99715 3063 aa11.93□□□□□ -0.5
SRRM1-216ENST00000489130 A0A1W2PQ72 361 aa11.93□□□□□ -0.5
SRRM1-216ENST00000489130 FANCGO15287 622 aa11.93□□□□□ -0.5
SRRM1-216ENST00000489130 TTI1O43156 1089 aa11.93□□□□□ -0.5
SRRM1-216ENST00000489130 HPP00738 406 aa11.93□□□□□ -0.5
SRRM1-216ENST00000489130 ACPPP15309 386 aa11.93□□□□□ -0.5
SRRM1-216ENST00000489130 FDXRP22570 491 aa11.93□□□□□ -0.5
SRRM1-216ENST00000489130 GNLYP22749 145 aa11.93□□□□□ -0.5
SRRM1-216ENST00000489130 CCND1P24385 295 aa11.93□□□□□ -0.5
SRRM1-216ENST00000489130 ITGA8P53708 1063 aa11.93□□□□□ -0.5
SRRM1-216ENST00000489130 ARL4CP56559 192 aa11.93□□□□□ -0.5
SRRM1-216ENST00000489130 RPS15AP62244 130 aaKnown RBP11.93□□□□□ -0.5
SRRM1-216ENST00000489130 PDAP1Q13442 181 aaKnown RBP11.93□□□□□ -0.5
SRRM1-216ENST00000489130 PHKG1Q16816 387 aa11.93□□□□□ -0.5
SRRM1-216ENST00000489130 HP1BP3Q5SSJ5 553 aaPredicted RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms