RNA–Protein interactions for RNA: ENST00000488839.1

SFXN5-219, Transcript of sideroflexin 5, humanhuman

TSL 3

Gene SFXN5, Length 671 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN5-219ENST00000488839 CASQ1P31415 396 aa11.8□□□□□ -0.52
SFXN5-219ENST00000488839 RPL21P46778 160 aaKnown RBP11.8□□□□□ -0.52
SFXN5-219ENST00000488839 CCL11P51671 97 aa11.8□□□□□ -0.52
SFXN5-219ENST00000488839 ARF3P61204 181 aaPredicted RBP11.8□□□□□ -0.52
SFXN5-219ENST00000488839 NFKB2Q00653 900 aa11.8□□□□□ -0.52
SFXN5-219ENST00000488839 CAV1Q03135 178 aa11.8□□□□□ -0.52
SFXN5-219ENST00000488839 PDIA2Q13087 525 aaKnown RBP11.8□□□□□ -0.52
SFXN5-219ENST00000488839 FAM53BQ14153 422 aa11.8□□□□□ -0.52
SFXN5-219ENST00000488839 NKG7Q16617 165 aa11.8□□□□□ -0.52
SFXN5-219ENST00000488839 THEMIS2Q5TEJ8 643 aa11.8□□□□□ -0.52
SFXN5-219ENST00000488839 HECTD2Q5U5R9 776 aa11.8□□□□□ -0.52
SFXN5-219ENST00000488839 FRMPD2BQ6IN97 320 aa11.8□□□□□ -0.52
SFXN5-219ENST00000488839 SUSD1Q6UWL2 747 aa11.8□□□□□ -0.52
SFXN5-219ENST00000488839 PIWIL4Q7Z3Z4 852 aaKnown RBP11.8□□□□□ -0.52
SFXN5-219ENST00000488839 MRGPREQ86SM8 312 aa11.8□□□□□ -0.52
SFXN5-219ENST00000488839 CLEC1AQ8NC01 280 aa11.8□□□□□ -0.52
SFXN5-219ENST00000488839 ATL1Q8WXF7 558 aa11.8□□□□□ -0.52
SFXN5-219ENST00000488839 NDNQ99608 321 aa11.8□□□□□ -0.52
SFXN5-219ENST00000488839 SMAD5Q99717 465 aaKnown RBP11.8□□□□□ -0.52
SFXN5-219ENST00000488839 TRIM51Q9BSJ1 452 aa11.8□□□□□ -0.52
SFXN5-219ENST00000488839 ACAT2Q9BWD1 397 aa11.8□□□□□ -0.52
SFXN5-219ENST00000488839 PLAC1Q9HBJ0 212 aa11.8□□□□□ -0.52
SFXN5-219ENST00000488839 ZNF304Q9HCX3 659 aa11.8□□□□□ -0.52
SFXN5-219ENST00000488839 SLC6A20Q9NP91 592 aa11.8□□□□□ -0.52
SFXN5-219ENST00000488839 ATP13A2Q9NQ11 1180 aa11.8□□□□□ -0.52
SFXN5-219ENST00000488839 SEMA3GQ9NS98 782 aa11.8□□□□□ -0.52
SFXN5-219ENST00000488839 ZFATQ9P243 1243 aa11.8□□□□□ -0.52
SFXN5-219ENST00000488839 NOVA2Q9UNW9 492 aaKnown RBP11.8□□□□□ -0.52
SFXN5-219ENST00000488839 CHMP2BQ9UQN3 213 aa11.8□□□□□ -0.52
SFXN5-219ENST00000488839 PDE10AQ9Y233 779 aa11.8□□□□□ -0.52
SFXN5-219ENST00000488839 PCM1Q15154 2024 aa11.8□□□□□ -0.52
SFXN5-219ENST00000488839 LOC105369274A0A096LPK9 316 aa11.79□□□□□ -0.52
SFXN5-219ENST00000488839 IGKV1-8A0A0C4DH67 115 aa11.79□□□□□ -0.52
SFXN5-219ENST00000488839 LOC102723532A0A0G2JNH3 316 aa11.79□□□□□ -0.52
SFXN5-219ENST00000488839 KRT87PA6NCN2 255 aa11.79□□□□□ -0.52
SFXN5-219ENST00000488839 AGPSO00116 658 aa11.79□□□□□ -0.52
SFXN5-219ENST00000488839 FANCGO15287 622 aa11.79□□□□□ -0.52
SFXN5-219ENST00000488839 DPM1O60762 260 aa11.79□□□□□ -0.52
SFXN5-219ENST00000488839 BANF1O75531 89 aa11.79□□□□□ -0.52
SFXN5-219ENST00000488839 ALPPP05187 535 aa11.79□□□□□ -0.52
SFXN5-219ENST00000488839 GSTA2P09210 222 aa11.79□□□□□ -0.52
SFXN5-219ENST00000488839 OTX2P32243 289 aa11.79□□□□□ -0.52
SFXN5-219ENST00000488839 CDKN2DP55273 166 aa11.79□□□□□ -0.52
SFXN5-219ENST00000488839 RPS15AP62244 130 aaKnown RBP11.79□□□□□ -0.52
SFXN5-219ENST00000488839 OCA2Q04671 838 aa11.79□□□□□ -0.52
SFXN5-219ENST00000488839 TLE1Q04724 770 aa11.79□□□□□ -0.52
SFXN5-219ENST00000488839 SLC9A5Q14940 896 aa11.79□□□□□ -0.52
SFXN5-219ENST00000488839 NDUFA9Q16795 377 aa11.79□□□□□ -0.52
SFXN5-219ENST00000488839 DCAF10Q5QP82 559 aa11.79□□□□□ -0.52
SFXN5-219ENST00000488839 RBM20Q5T481 1227 aaKnown RBP11.79□□□□□ -0.52
SFXN5-219ENST00000488839 DUPD1Q68J44 220 aa11.79□□□□□ -0.52
SFXN5-219ENST00000488839 AGTRAPQ6RW13 159 aa11.79□□□□□ -0.52
SFXN5-219ENST00000488839 LCTLQ6UWM7 567 aa11.79□□□□□ -0.52
SFXN5-219ENST00000488839 COX15Q7KZN9 410 aa11.79□□□□□ -0.52
SFXN5-219ENST00000488839 OR4N4Q8N0Y3 316 aa11.79□□□□□ -0.52
SFXN5-219ENST00000488839 NKAPQ8N5F7 415 aaKnown RBP11.79□□□□□ -0.52
SFXN5-219ENST00000488839 FBXO36Q8NEA4 188 aa11.79□□□□□ -0.52
SFXN5-219ENST00000488839 PYROXD1Q8WU10 500 aa11.79□□□□□ -0.52
SFXN5-219ENST00000488839 CDKL2Q92772 493 aa11.79□□□□□ -0.52
SFXN5-219ENST00000488839 CFAP36Q96G28 342 aa11.79□□□□□ -0.52
SFXN5-219ENST00000488839 HAUS8Q9BT25 410 aa11.79□□□□□ -0.52
SFXN5-219ENST00000488839 RAB17Q9H0T7 212 aa11.79□□□□□ -0.52
SFXN5-219ENST00000488839 CLMPQ9H6B4 373 aa11.79□□□□□ -0.52
SFXN5-219ENST00000488839 POPDC3Q9HBV1 291 aa11.79□□□□□ -0.52
SFXN5-219ENST00000488839 P4HTMQ9NXG6 502 aa11.79□□□□□ -0.52
SFXN5-219ENST00000488839 GPR83Q9NYM4 423 aa11.79□□□□□ -0.52
SFXN5-219ENST00000488839 STOX2Q9P2F5 926 aaPredicted RBP11.79□□□□□ -0.52
SFXN5-219ENST00000488839 ZNF282Q9UDV7 671 aaPredicted RBP11.79□□□□□ -0.52
SFXN5-219ENST00000488839 SNX24Q9Y343 169 aa11.79□□□□□ -0.52
SFXN5-219ENST00000488839 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.79□□□□□ -0.52
SFXN5-219ENST00000488839 BSNQ9UPA5 3926 aa11.79□□□□□ -0.52
SFXN5-219ENST00000488839 CNOT3O75175 753 aaKnown RBP11.78□□□□□ -0.52
SFXN5-219ENST00000488839 DNAJB5O75953 348 aa11.78□□□□□ -0.52
SFXN5-219ENST00000488839 TSPAN12O95859 305 aa11.78□□□□□ -0.52
SFXN5-219ENST00000488839 EIF2S1P05198 315 aaKnown RBP11.78□□□□□ -0.52
SFXN5-219ENST00000488839 UMODP07911 640 aa11.78□□□□□ -0.52
SFXN5-219ENST00000488839 CYC1P08574 325 aa11.78□□□□□ -0.52
SFXN5-219ENST00000488839 GRK3P35626 688 aa11.78□□□□□ -0.52
SFXN5-219ENST00000488839 AIMP2Q13155 320 aaKnown RBP11.78□□□□□ -0.52
SFXN5-219ENST00000488839 TSTA3Q13630 321 aaPredicted RBP11.78□□□□□ -0.52
SFXN5-219ENST00000488839 ATP1A4Q13733 1029 aa11.78□□□□□ -0.52
SFXN5-219ENST00000488839 MYBPC3Q14896 1274 aa11.78□□□□□ -0.52
SFXN5-219ENST00000488839 PRAMEF13Q5VWM6 474 aa11.78□□□□□ -0.52
SFXN5-219ENST00000488839 CPZQ66K79 652 aa11.78□□□□□ -0.52
SFXN5-219ENST00000488839 CAPN13Q6MZZ7 669 aaPredicted RBP11.78□□□□□ -0.52
SFXN5-219ENST00000488839 TRMT10BQ6PF06 316 aaKnown RBP11.78□□□□□ -0.52
SFXN5-219ENST00000488839 IGFL3Q6UXB1 125 aa11.78□□□□□ -0.52
SFXN5-219ENST00000488839 ZNF572Q7Z3I7 529 aaPredicted RBP11.78□□□□□ -0.52
SFXN5-219ENST00000488839 PPP1R32Q7Z5V6 425 aa11.78□□□□□ -0.52
SFXN5-219ENST00000488839 ZBED8Q8IZ13 594 aa11.78□□□□□ -0.52
SFXN5-219ENST00000488839 GALNT16Q8N428 558 aa11.78□□□□□ -0.52
SFXN5-219ENST00000488839 CSNK1A1LQ8N752 337 aa11.78□□□□□ -0.52
SFXN5-219ENST00000488839 GPATCH11Q8N954 259 aa11.78□□□□□ -0.52
SFXN5-219ENST00000488839 PPFIBP2Q8ND30 876 aa11.78□□□□□ -0.52
SFXN5-219ENST00000488839 FDCSPQ8NFU4 85 aa11.78□□□□□ -0.52
SFXN5-219ENST00000488839 COL26A1Q96A83 441 aa11.78□□□□□ -0.52
SFXN5-219ENST00000488839 LINGO1Q96FE5 620 aa11.78□□□□□ -0.52
SFXN5-219ENST00000488839 VPS39Q96JC1 886 aa11.78□□□□□ -0.52
SFXN5-219ENST00000488839 CABS1Q96KC9 395 aa11.78□□□□□ -0.52
SFXN5-219ENST00000488839 PWWP2AQ96N64 755 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms