RNA–Protein interactions for RNA: ENST00000488293.4

MECP2-210, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5

Gene MECP2, Length 1,198 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-210ENST00000488293 ABCF3Q9NUQ8 709 aa12.7□□□□□ -0.38
MECP2-210ENST00000488293 TMEM184CQ9NVA4 438 aa12.7□□□□□ -0.38
MECP2-210ENST00000488293 STOX2Q9P2F5 926 aaPredicted RBP12.7□□□□□ -0.38
MECP2-210ENST00000488293 CTSFQ9UBX1 484 aa12.7□□□□□ -0.38
MECP2-210ENST00000488293 ZNF282Q9UDV7 671 aaPredicted RBP12.7□□□□□ -0.38
MECP2-210ENST00000488293 CDC23Q9UJX2 597 aa12.7□□□□□ -0.38
MECP2-210ENST00000488293 ADAMTS6Q9UKP5 1117 aa12.7□□□□□ -0.38
MECP2-210ENST00000488293 PDE10AQ9Y233 779 aa12.7□□□□□ -0.38
MECP2-210ENST00000488293 RUVBL1Q9Y265 456 aaKnown RBP12.7□□□□□ -0.38
MECP2-210ENST00000488293 VWA7Q9Y334 891 aa12.7□□□□□ -0.38
MECP2-210ENST00000488293 MAU2Q9Y6X3 613 aa12.7□□□□□ -0.38
MECP2-210ENST00000488293 SHANK1Q9Y566 2161 aa12.69□□□□□ -0.38
MECP2-210ENST00000488293 IGLV3-12A0A075B6K2 115 aa12.69□□□□□ -0.38
MECP2-210ENST00000488293 EFCAB8A8MWE9 144 aa12.69□□□□□ -0.38
MECP2-210ENST00000488293 H7BY64 318 aa12.69□□□□□ -0.38
MECP2-210ENST00000488293 PRPF4O43172 522 aaKnown RBP eCLIP12.69□□□□□ -0.38
MECP2-210ENST00000488293 IPO13O94829 963 aaKnown RBP12.69□□□□□ -0.38
MECP2-210ENST00000488293 HIST1H2AGP0C0S8 130 aaPredicted RBP12.69□□□□□ -0.38
MECP2-210ENST00000488293 HIST1H2ADP20671 130 aa12.69□□□□□ -0.38
MECP2-210ENST00000488293 FBLP22087 321 aaKnown RBP12.69□□□□□ -0.38
MECP2-210ENST00000488293 CCND1P24385 295 aa12.69□□□□□ -0.38
MECP2-210ENST00000488293 IL2P60568 153 aa12.69□□□□□ -0.38
MECP2-210ENST00000488293 PDAP1Q13442 181 aaKnown RBP12.69□□□□□ -0.38
MECP2-210ENST00000488293 FAM45BPQ6NSW5 357 aa12.69□□□□□ -0.38
MECP2-210ENST00000488293 JMJD6Q6NYC1 403 aaPredicted RBP12.69□□□□□ -0.38
MECP2-210ENST00000488293 TRMT10BQ6PF06 316 aaKnown RBP12.69□□□□□ -0.38
MECP2-210ENST00000488293 ADCK2Q7Z695 626 aa12.69□□□□□ -0.38
MECP2-210ENST00000488293 DTWD1Q8N5C7 304 aa12.69□□□□□ -0.38
MECP2-210ENST00000488293 BBOF1Q8ND07 529 aa12.69□□□□□ -0.38
MECP2-210ENST00000488293 FAM45AQ8TCE6 357 aa12.69□□□□□ -0.38
MECP2-210ENST00000488293 STT3BQ8TCJ2 826 aa12.69□□□□□ -0.38
MECP2-210ENST00000488293 PNPLA2Q96AD5 504 aa12.69□□□□□ -0.38
MECP2-210ENST00000488293 MIEF2Q96C03 454 aa12.69□□□□□ -0.38
MECP2-210ENST00000488293 LINGO1Q96FE5 620 aa12.69□□□□□ -0.38
MECP2-210ENST00000488293 HIST1H2AHQ96KK5 128 aa12.69□□□□□ -0.38
MECP2-210ENST00000488293 PRAP1Q96NZ9 151 aa12.69□□□□□ -0.38
MECP2-210ENST00000488293 KRT12Q99456 494 aa12.69□□□□□ -0.38
MECP2-210ENST00000488293 HIST1H2AJQ99878 128 aa12.69□□□□□ -0.38
MECP2-210ENST00000488293 WDR83Q9BRX9 315 aaKnown RBP12.69□□□□□ -0.38
MECP2-210ENST00000488293 H2AFJQ9BTM1 129 aa12.69□□□□□ -0.38
MECP2-210ENST00000488293 SOX17Q9H6I2 414 aaPredicted RBP12.69□□□□□ -0.38
MECP2-210ENST00000488293 PLAAQ9Y263 795 aa12.69□□□□□ -0.38
MECP2-210ENST00000488293 HS3ST3B1Q9Y662 390 aa12.69□□□□□ -0.38
MECP2-210ENST00000488293 RP1L1Q8IWN7 2480 aaPredicted RBP12.69□□□□□ -0.38
MECP2-210ENST00000488293 SCN3AQ9NY46 2000 aa12.69□□□□□ -0.38
MECP2-210ENST00000488293 KCNE1BA0A087WTH5 132 aa12.68□□□□□ -0.38
MECP2-210ENST00000488293 E7ESA3 106 aa12.68□□□□□ -0.38
MECP2-210ENST00000488293 SOCS6O14544 535 aa12.68□□□□□ -0.38
MECP2-210ENST00000488293 HAT1O14929 419 aa12.68□□□□□ -0.38
MECP2-210ENST00000488293 FANCGO15287 622 aa12.68□□□□□ -0.38
MECP2-210ENST00000488293 TP73O15350 636 aa12.68□□□□□ -0.38
MECP2-210ENST00000488293 SORBS2O94875 1100 aaKnown RBP12.68□□□□□ -0.38
MECP2-210ENST00000488293 TSPAN12O95859 305 aa12.68□□□□□ -0.38
MECP2-210ENST00000488293 ZGLP1P0C6A0 271 aa12.68□□□□□ -0.38
MECP2-210ENST00000488293 FDXRP22570 491 aa12.68□□□□□ -0.38
MECP2-210ENST00000488293 VARSP26640 1264 aaKnown RBP12.68□□□□□ -0.38
MECP2-210ENST00000488293 RPL21P46778 160 aaKnown RBP12.68□□□□□ -0.38
MECP2-210ENST00000488293 AP1S2P56377 157 aa12.68□□□□□ -0.38
MECP2-210ENST00000488293 TBPL1P62380 186 aa12.68□□□□□ -0.38
MECP2-210ENST00000488293 KLC1Q07866 573 aa12.68□□□□□ -0.38
MECP2-210ENST00000488293 PDIA2Q13087 525 aaKnown RBP12.68□□□□□ -0.38
MECP2-210ENST00000488293 RAPSNQ13702 412 aa12.68□□□□□ -0.38
MECP2-210ENST00000488293 DSG2Q14126 1118 aa12.68□□□□□ -0.38
MECP2-210ENST00000488293 FAM53BQ14153 422 aa12.68□□□□□ -0.38
MECP2-210ENST00000488293 RBBP7Q16576 425 aa12.68□□□□□ -0.38
MECP2-210ENST00000488293 HKDC1Q2TB90 917 aa12.68□□□□□ -0.38
MECP2-210ENST00000488293 HECTD2Q5U5R9 776 aa12.68□□□□□ -0.38
MECP2-210ENST00000488293 PRAMEF13Q5VWM6 474 aa12.68□□□□□ -0.38
MECP2-210ENST00000488293 AGTRAPQ6RW13 159 aa12.68□□□□□ -0.38
MECP2-210ENST00000488293 KIRREL2Q6UWL6 708 aa12.68□□□□□ -0.38
MECP2-210ENST00000488293 IGFL3Q6UXB1 125 aa12.68□□□□□ -0.38
MECP2-210ENST00000488293 SHISA6Q6ZSJ9 500 aa12.68□□□□□ -0.38
MECP2-210ENST00000488293 ANKMY2Q8IV38 441 aa12.68□□□□□ -0.38
MECP2-210ENST00000488293 ARHGEF39Q8N4T4 335 aa12.68□□□□□ -0.38
MECP2-210ENST00000488293 EFCAB3Q8N7B9 438 aa12.68□□□□□ -0.38
MECP2-210ENST00000488293 RBMXL3Q8N7X1 1067 aaKnown RBP12.68□□□□□ -0.38
MECP2-210ENST00000488293 GPATCH11Q8N954 259 aa12.68□□□□□ -0.38
MECP2-210ENST00000488293 CPT1CQ8TCG5 803 aa12.68□□□□□ -0.38
MECP2-210ENST00000488293 THAP11Q96EK4 314 aa12.68□□□□□ -0.38
MECP2-210ENST00000488293 PDLIM5Q96HC4 596 aaKnown RBP12.68□□□□□ -0.38
MECP2-210ENST00000488293 CRB3Q9BUF7 120 aa12.68□□□□□ -0.38
MECP2-210ENST00000488293 TRIM54Q9BYV2 358 aa12.68□□□□□ -0.38
MECP2-210ENST00000488293 TRIM31Q9BZY9 425 aa12.68□□□□□ -0.38
MECP2-210ENST00000488293 ZNF552Q9H707 407 aaPredicted RBP12.68□□□□□ -0.38
MECP2-210ENST00000488293 SYNPO2LQ9H987 977 aa12.68□□□□□ -0.38
MECP2-210ENST00000488293 CUEDC1Q9NWM3 386 aaPredicted RBP12.68□□□□□ -0.38
MECP2-210ENST00000488293 MOCS1Q9NZB8 636 aa12.68□□□□□ -0.38
MECP2-210ENST00000488293 SLC17A6Q9P2U8 582 aa12.68□□□□□ -0.38
MECP2-210ENST00000488293 FBXL4Q9UKA2 621 aa12.68□□□□□ -0.38
MECP2-210ENST00000488293 COL12A1Q99715 3063 aa12.68□□□□□ -0.38
MECP2-210ENST00000488293 PABPN1LA6NDY0 278 aaKnown RBP12.67□□□□□ -0.38
MECP2-210ENST00000488293 FAM187AA6NFU0 413 aa12.67□□□□□ -0.38
MECP2-210ENST00000488293 ITGA3P26006 1051 aa12.67□□□□□ -0.38
MECP2-210ENST00000488293 SLC26A3P40879 764 aa12.67□□□□□ -0.38
MECP2-210ENST00000488293 RPS15AP62244 130 aaKnown RBP12.67□□□□□ -0.38
MECP2-210ENST00000488293 MGAT5Q09328 741 aa12.67□□□□□ -0.38
MECP2-210ENST00000488293 ILF2Q12905 390 aaKnown RBP12.67□□□□□ -0.38
MECP2-210ENST00000488293 NDUFA9Q16795 377 aa12.67□□□□□ -0.38
MECP2-210ENST00000488293 PHKG1Q16816 387 aa12.67□□□□□ -0.38
MECP2-210ENST00000488293 TUBB8Q3ZCM7 444 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms