RNA–Protein interactions for RNA: ENST00000487876.1

RPSA-208, Transcript of ribosomal protein SA, humanhuman

TSL 4

Gene RPSA, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-208ENST00000487876 NAA25Q14CX7 972 aa12.32□□□□□ -0.44
RPSA-208ENST00000487876 HKDC1Q2TB90 917 aa12.32□□□□□ -0.44
RPSA-208ENST00000487876 PRTGQ2VWP7 1150 aa12.32□□□□□ -0.44
RPSA-208ENST00000487876 LACTB2Q53H82 288 aaPredicted RBP12.32□□□□□ -0.44
RPSA-208ENST00000487876 AGTRAPQ6RW13 159 aa12.32□□□□□ -0.44
RPSA-208ENST00000487876 SBSNQ6UWP8 590 aa12.32□□□□□ -0.44
RPSA-208ENST00000487876 SHISA6Q6ZSJ9 500 aa12.32□□□□□ -0.44
RPSA-208ENST00000487876 MRGPREQ86SM8 312 aa12.32□□□□□ -0.44
RPSA-208ENST00000487876 CEP97Q8IW35 865 aa12.32□□□□□ -0.44
RPSA-208ENST00000487876 PALM2Q8IXS6 379 aa12.32□□□□□ -0.44
RPSA-208ENST00000487876 OR2Y1Q8NGV0 311 aa12.32□□□□□ -0.44
RPSA-208ENST00000487876 ZNF592Q92610 1267 aa12.32□□□□□ -0.44
RPSA-208ENST00000487876 ALKBH8Q96BT7 664 aaKnown RBP12.32□□□□□ -0.44
RPSA-208ENST00000487876 VPS39Q96JC1 886 aa12.32□□□□□ -0.44
RPSA-208ENST00000487876 OR2A5Q96R48 311 aa12.32□□□□□ -0.44
RPSA-208ENST00000487876 LRRC1Q9BTT6 524 aa12.32□□□□□ -0.44
RPSA-208ENST00000487876 RAB17Q9H0T7 212 aa12.32□□□□□ -0.44
RPSA-208ENST00000487876 ING2Q9H160 280 aa12.32□□□□□ -0.44
RPSA-208ENST00000487876 CAB39LQ9H9S4 337 aa12.32□□□□□ -0.44
RPSA-208ENST00000487876 ARL15Q9NXU5 204 aa12.32□□□□□ -0.44
RPSA-208ENST00000487876 CTSFQ9UBX1 484 aa12.32□□□□□ -0.44
RPSA-208ENST00000487876 HEMK1Q9Y5R4 338 aaPredicted RBP12.32□□□□□ -0.44
RPSA-208ENST00000487876 DOCK10Q96BY6 2186 aa12.32□□□□□ -0.44
RPSA-208ENST00000487876 NPEPPSL1A6NEC2 478 aa12.31□□□□□ -0.44
RPSA-208ENST00000487876 MKRN2OSH3BPM6 223 aa12.31□□□□□ -0.44
RPSA-208ENST00000487876 H7BY64 318 aa12.31□□□□□ -0.44
RPSA-208ENST00000487876 CDC7O00311 574 aa12.31□□□□□ -0.44
RPSA-208ENST00000487876 SUV39H1O43463 412 aa12.31□□□□□ -0.44
RPSA-208ENST00000487876 ABATP80404 500 aa12.31□□□□□ -0.44
RPSA-208ENST00000487876 NKG7Q16617 165 aa12.31□□□□□ -0.44
RPSA-208ENST00000487876 YOD1Q5VVQ6 348 aaPredicted RBP12.31□□□□□ -0.44
RPSA-208ENST00000487876 C8orf74Q6P047 294 aa12.31□□□□□ -0.44
RPSA-208ENST00000487876 PPP1R32Q7Z5V6 425 aa12.31□□□□□ -0.44
RPSA-208ENST00000487876 CSNK1A1LQ8N752 337 aa12.31□□□□□ -0.44
RPSA-208ENST00000487876 ANKRD49Q8WVL7 239 aa12.31□□□□□ -0.44
RPSA-208ENST00000487876 PYCR2Q96C36 320 aa12.31□□□□□ -0.44
RPSA-208ENST00000487876 CABS1Q96KC9 395 aa12.31□□□□□ -0.44
RPSA-208ENST00000487876 PRAP1Q96NZ9 151 aa12.31□□□□□ -0.44
RPSA-208ENST00000487876 C17orf62Q9BQA9 187 aa12.31□□□□□ -0.44
RPSA-208ENST00000487876 UNKQ9C0B0 810 aaKnown RBP12.31□□□□□ -0.44
RPSA-208ENST00000487876 RHOJQ9H4E5 214 aa12.31□□□□□ -0.44
RPSA-208ENST00000487876 ACSS2Q9NR19 701 aa12.31□□□□□ -0.44
RPSA-208ENST00000487876 NSMCE4AQ9NXX6 385 aa12.31□□□□□ -0.44
RPSA-208ENST00000487876 UTP6Q9NYH9 597 aaKnown RBP12.31□□□□□ -0.44
RPSA-208ENST00000487876 RUVBL1Q9Y265 456 aaKnown RBP12.31□□□□□ -0.44
RPSA-208ENST00000487876 MTO1Q9Y2Z2 717 aaKnown RBP12.31□□□□□ -0.44
RPSA-208ENST00000487876 RELNP78509 3460 aa12.3□□□□□ -0.44
RPSA-208ENST00000487876 FEZF1A0PJY2 475 aa12.3□□□□□ -0.44
RPSA-208ENST00000487876 FAM159BA6NKW6 160 aa12.3□□□□□ -0.44
RPSA-208ENST00000487876 FFAR3O14843 346 aa12.3□□□□□ -0.44
RPSA-208ENST00000487876 GPR42O15529 346 aa12.3□□□□□ -0.44
RPSA-208ENST00000487876 GUCA1CO95843 209 aa12.3□□□□□ -0.44
RPSA-208ENST00000487876 ONECUT2O95948 504 aa12.3□□□□□ -0.44
RPSA-208ENST00000487876 CDH1P12830 882 aa12.3□□□□□ -0.44
RPSA-208ENST00000487876 MAGEA4P43358 317 aa12.3□□□□□ -0.44
RPSA-208ENST00000487876 CCL11P51671 97 aa12.3□□□□□ -0.44
RPSA-208ENST00000487876 CAV1Q03135 178 aa12.3□□□□□ -0.44
RPSA-208ENST00000487876 RAPSNQ13702 412 aa12.3□□□□□ -0.44
RPSA-208ENST00000487876 EFTUD2Q15029 972 aaKnown RBP eCLIP12.3□□□□□ -0.443e-6■■■■□ 26.7
RPSA-208ENST00000487876 PPP1R3AQ16821 1122 aa12.3□□□□□ -0.44
RPSA-208ENST00000487876 WHAMMP3Q1A5X7 153 aa12.3□□□□□ -0.44
RPSA-208ENST00000487876 FAM214AQ32MH5 1076 aa12.3□□□□□ -0.44
RPSA-208ENST00000487876 UBAP2Q5T6F2 1119 aaKnown RBP12.3□□□□□ -0.44
RPSA-208ENST00000487876 C3orf62Q6ZUJ4 267 aa12.3□□□□□ -0.44
RPSA-208ENST00000487876 OVCH1Q7RTY7 1134 aa12.3□□□□□ -0.44
RPSA-208ENST00000487876 RAB43Q86YS6 212 aa12.3□□□□□ -0.44
RPSA-208ENST00000487876 ARHGEF39Q8N4T4 335 aa12.3□□□□□ -0.44
RPSA-208ENST00000487876 NOA1Q8NC60 698 aaKnown RBP12.3□□□□□ -0.44
RPSA-208ENST00000487876 FKBP10Q96AY3 582 aa12.3□□□□□ -0.44
RPSA-208ENST00000487876 OR4K3Q96R72 315 aa12.3□□□□□ -0.44
RPSA-208ENST00000487876 SPSB2Q99619 263 aa12.3□□□□□ -0.44
RPSA-208ENST00000487876 MESP1Q9BRJ9 268 aa12.3□□□□□ -0.44
RPSA-208ENST00000487876 SGPP1Q9BX95 441 aa12.3□□□□□ -0.44
RPSA-208ENST00000487876 SOX17Q9H6I2 414 aaPredicted RBP12.3□□□□□ -0.44
RPSA-208ENST00000487876 MRPS2Q9Y399 296 aaKnown RBP12.3□□□□□ -0.44
RPSA-208ENST00000487876 A6NL46 340 aa12.29□□□□□ -0.44
RPSA-208ENST00000487876 PHGDHO43175 533 aaKnown RBP12.29□□□□□ -0.44
RPSA-208ENST00000487876 ALOX12BO75342 701 aa12.29□□□□□ -0.44
RPSA-208ENST00000487876 FAM155BO75949 473 aa12.29□□□□□ -0.44
RPSA-208ENST00000487876 WISP3O95389 354 aaPredicted RBP12.29□□□□□ -0.44
RPSA-208ENST00000487876 HIST1H2AGP0C0S8 130 aaPredicted RBP12.29□□□□□ -0.44
RPSA-208ENST00000487876 NPPBP16860 134 aa12.29□□□□□ -0.44
RPSA-208ENST00000487876 HIST1H2ADP20671 130 aa12.29□□□□□ -0.44
RPSA-208ENST00000487876 GMPRP36959 345 aa12.29□□□□□ -0.44
RPSA-208ENST00000487876 BCL6P41182 706 aa12.29□□□□□ -0.44
RPSA-208ENST00000487876 AP1S2P56377 157 aa12.29□□□□□ -0.44
RPSA-208ENST00000487876 CSNK1G2P78368 415 aa12.29□□□□□ -0.44
RPSA-208ENST00000487876 MEF2AQ02078 507 aaPredicted RBP12.29□□□□□ -0.44
RPSA-208ENST00000487876 SSPNQ14714 243 aa12.29□□□□□ -0.44
RPSA-208ENST00000487876 TSNQ15631 228 aaKnown RBP12.29□□□□□ -0.44
RPSA-208ENST00000487876 MUM1Q2TAK8 710 aa12.29□□□□□ -0.44
RPSA-208ENST00000487876 KBTBD12Q3ZCT8 623 aa12.29□□□□□ -0.44
RPSA-208ENST00000487876 CAPN13Q6MZZ7 669 aaPredicted RBP12.29□□□□□ -0.44
RPSA-208ENST00000487876 TCTN3Q6NUS6 607 aa12.29□□□□□ -0.44
RPSA-208ENST00000487876 ASB18Q6ZVZ8 466 aa12.29□□□□□ -0.44
RPSA-208ENST00000487876 VN1R4Q7Z5H5 301 aa12.29□□□□□ -0.44
RPSA-208ENST00000487876 C17orf64Q86WR6 236 aa12.29□□□□□ -0.44
RPSA-208ENST00000487876 CTAGE3PQ8IX95 158 aa12.29□□□□□ -0.44
RPSA-208ENST00000487876 PRSS58Q8IYP2 241 aa12.29□□□□□ -0.44
RPSA-208ENST00000487876 SPATA6LQ8N4H0 392 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms