RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 MPP1Q00013 466 aa11.85□□□□□ -0.51
SREBF1-215ENST00000487401 RELAQ04206 551 aa11.85□□□□□ -0.51
SREBF1-215ENST00000487401 DSG2Q14126 1118 aa11.85□□□□□ -0.51
SREBF1-215ENST00000487401 NDUFA9Q16795 377 aa11.85□□□□□ -0.51
SREBF1-215ENST00000487401 HKDC1Q2TB90 917 aa11.85□□□□□ -0.51
SREBF1-215ENST00000487401 VWA2Q5GFL6 755 aa11.85□□□□□ -0.51
SREBF1-215ENST00000487401 ZNF425Q6IV72 752 aa11.85□□□□□ -0.51
SREBF1-215ENST00000487401 ISLR2Q6UXK2 745 aa11.85□□□□□ -0.51
SREBF1-215ENST00000487401 CYHR1Q6ZMK1 362 aa11.85□□□□□ -0.51
SREBF1-215ENST00000487401 LINC00696Q6ZRV3 163 aa11.85□□□□□ -0.51
SREBF1-215ENST00000487401 NDUFAF7Q7L592 441 aa11.85□□□□□ -0.51
SREBF1-215ENST00000487401 PIWIL4Q7Z3Z4 852 aaKnown RBP11.85□□□□□ -0.51
SREBF1-215ENST00000487401 PALM2Q8IXS6 379 aa11.85□□□□□ -0.51
SREBF1-215ENST00000487401 KBTBD2Q8IY47 623 aa11.85□□□□□ -0.51
SREBF1-215ENST00000487401 CPNE9Q8IYJ1 553 aa11.85□□□□□ -0.51
SREBF1-215ENST00000487401 SLC35F6Q8N357 371 aa11.85□□□□□ -0.51
SREBF1-215ENST00000487401 MCOLN3Q8TDD5 553 aa11.85□□□□□ -0.51
SREBF1-215ENST00000487401 ACTRT1Q8TDG2 376 aa11.85□□□□□ -0.51
SREBF1-215ENST00000487401 PPP4R1Q8TF05 950 aa11.85□□□□□ -0.51
SREBF1-215ENST00000487401 C8orf44Q96CB5 159 aa11.85□□□□□ -0.51
SREBF1-215ENST00000487401 CNDP1Q96KN2 507 aa11.85□□□□□ -0.51
SREBF1-215ENST00000487401 OR2A5Q96R48 311 aa11.85□□□□□ -0.51
SREBF1-215ENST00000487401 AARSD1Q9BTE6 412 aaKnown RBP11.85□□□□□ -0.51
SREBF1-215ENST00000487401 PLEKHB1Q9UF11 243 aaPredicted RBP11.85□□□□□ -0.51
SREBF1-215ENST00000487401 ASIC3Q9UHC3 531 aa11.85□□□□□ -0.51
SREBF1-215ENST00000487401 MED16Q9Y2X0 877 aa11.85□□□□□ -0.51
SREBF1-215ENST00000487401 NBASA2RRP1 2371 aa11.84□□□□□ -0.51
SREBF1-215ENST00000487401 NSG1A0A0A6YYJ2 146 aa11.84□□□□□ -0.51
SREBF1-215ENST00000487401 ANKUB1A6NFN9 424 aa11.84□□□□□ -0.51
SREBF1-215ENST00000487401 IDSB3KWA1 339 aa11.84□□□□□ -0.51
SREBF1-215ENST00000487401 H7BY64 318 aa11.84□□□□□ -0.51
SREBF1-215ENST00000487401 EIF3FO00303 357 aaPredicted RBP11.84□□□□□ -0.51
SREBF1-215ENST00000487401 HAT1O14929 419 aa11.84□□□□□ -0.51
SREBF1-215ENST00000487401 UQCRHP07919 91 aa11.84□□□□□ -0.51
SREBF1-215ENST00000487401 PGAM1P18669 254 aa11.84□□□□□ -0.51
SREBF1-215ENST00000487401 HRH2P25021 359 aa11.84□□□□□ -0.51
SREBF1-215ENST00000487401 SLC26A3P40879 764 aa11.84□□□□□ -0.51
SREBF1-215ENST00000487401 SKIV2L2P42285 1042 aaKnown RBP11.84□□□□□ -0.51
SREBF1-215ENST00000487401 AVPR1BP47901 424 aa11.84□□□□□ -0.51
SREBF1-215ENST00000487401 Q0VFX4 171 aa11.84□□□□□ -0.51
SREBF1-215ENST00000487401 CRB2Q5IJ48 1285 aa11.84□□□□□ -0.51
SREBF1-215ENST00000487401 ATG9BQ674R7 924 aa11.84□□□□□ -0.51
SREBF1-215ENST00000487401 LRRC8EQ6NSJ5 796 aa11.84□□□□□ -0.51
SREBF1-215ENST00000487401 IGFL2Q6UWQ7 119 aa11.84□□□□□ -0.51
SREBF1-215ENST00000487401 PCGF5Q86SE9 256 aa11.84□□□□□ -0.51
SREBF1-215ENST00000487401 LAPTM4BQ86VI4 370 aa11.84□□□□□ -0.51
SREBF1-215ENST00000487401 KCNMB4Q86W47 210 aa11.84□□□□□ -0.51
SREBF1-215ENST00000487401 PLD3Q8IV08 490 aa11.84□□□□□ -0.51
SREBF1-215ENST00000487401 AGGF1Q8N302 714 aaeCLIP11.84□□□□□ -0.51
SREBF1-215ENST00000487401 CD200R1Q8TD46 325 aa11.84□□□□□ -0.51
SREBF1-215ENST00000487401 CCDC138Q96M89 665 aa11.84□□□□□ -0.51
SREBF1-215ENST00000487401 PRAP1Q96NZ9 151 aa11.84□□□□□ -0.51
SREBF1-215ENST00000487401 LMF1Q96S06 567 aa11.84□□□□□ -0.51
SREBF1-215ENST00000487401 DRC3Q9H069 523 aa11.84□□□□□ -0.51
SREBF1-215ENST00000487401 PCBD2Q9H0N5 130 aa11.84□□□□□ -0.51
SREBF1-215ENST00000487401 MKKSQ9NPJ1 570 aaPredicted RBP11.84□□□□□ -0.51
SREBF1-215ENST00000487401 CCDC177Q9NQR7 707 aaPredicted RBP11.84□□□□□ -0.51
SREBF1-215ENST00000487401 C14orf105Q9NVL8 296 aa11.84□□□□□ -0.51
SREBF1-215ENST00000487401 NOVA2Q9UNW9 492 aaKnown RBP11.84□□□□□ -0.51
SREBF1-215ENST00000487401 IGLV3-12A0A075B6K2 115 aa11.83□□□□□ -0.52
SREBF1-215ENST00000487401 A0A0A6YYC8 382 aaPredicted RBP11.83□□□□□ -0.52
SREBF1-215ENST00000487401 I3L1I5 382 aaPredicted RBP11.83□□□□□ -0.52
SREBF1-215ENST00000487401 CES2O00748 559 aa11.83□□□□□ -0.52
SREBF1-215ENST00000487401 FFAR3O14843 346 aa11.83□□□□□ -0.52
SREBF1-215ENST00000487401 PCDH17O14917 1159 aa11.83□□□□□ -0.52
SREBF1-215ENST00000487401 GPR42O15529 346 aa11.83□□□□□ -0.52
SREBF1-215ENST00000487401 WFS1O76024 890 aa11.83□□□□□ -0.52
SREBF1-215ENST00000487401 TTC4O95801 387 aa11.83□□□□□ -0.52
SREBF1-215ENST00000487401 FDXRP22570 491 aa11.83□□□□□ -0.52
SREBF1-215ENST00000487401 IMPA1P29218 277 aa11.83□□□□□ -0.52
SREBF1-215ENST00000487401 EEF1A2Q05639 463 aaKnown RBP11.83□□□□□ -0.52
SREBF1-215ENST00000487401 CDC16Q13042 620 aa11.83□□□□□ -0.52
SREBF1-215ENST00000487401 MFAP5Q13361 173 aa11.83□□□□□ -0.52
SREBF1-215ENST00000487401 CRYMQ14894 314 aa11.83□□□□□ -0.52
SREBF1-215ENST00000487401 ZNF169Q14929 603 aaPredicted RBP11.83□□□□□ -0.52
SREBF1-215ENST00000487401 TLR1Q15399 786 aa11.83□□□□□ -0.52
SREBF1-215ENST00000487401 RNASEH2BQ5TBB1 312 aaKnown RBP11.83□□□□□ -0.52
SREBF1-215ENST00000487401 FAAH2Q6GMR7 532 aa11.83□□□□□ -0.52
SREBF1-215ENST00000487401 SPNS2Q8IVW8 549 aa11.83□□□□□ -0.52
SREBF1-215ENST00000487401 LRRC56Q8IYG6 542 aaPredicted RBP11.83□□□□□ -0.52
SREBF1-215ENST00000487401 MYO1HQ8N1T3 1032 aa11.83□□□□□ -0.52
SREBF1-215ENST00000487401 C2CD4AQ8NCU7 369 aaPredicted RBP11.83□□□□□ -0.52
SREBF1-215ENST00000487401 NDNQ99608 321 aa11.83□□□□□ -0.52
SREBF1-215ENST00000487401 MESP1Q9BRJ9 268 aa11.83□□□□□ -0.52
SREBF1-215ENST00000487401 NAT9Q9BTE0 207 aa11.83□□□□□ -0.52
SREBF1-215ENST00000487401 TGIF2Q9GZN2 237 aa11.83□□□□□ -0.52
SREBF1-215ENST00000487401 TMEM184CQ9NVA4 438 aa11.83□□□□□ -0.52
SREBF1-215ENST00000487401 TAS2R13Q9NYV9 303 aa11.83□□□□□ -0.52
SREBF1-215ENST00000487401 SNX12Q9UMY4 172 aa11.83□□□□□ -0.52
SREBF1-215ENST00000487401 CSAG2Q9Y5P2 127 aa11.83□□□□□ -0.52
SREBF1-215ENST00000487401 PABPN1LA6NDY0 278 aaKnown RBP11.82□□□□□ -0.52
SREBF1-215ENST00000487401 DNALI1O14645 258 aaPredicted RBP11.82□□□□□ -0.52
SREBF1-215ENST00000487401 SLC16A5O15375 505 aa11.82□□□□□ -0.52
SREBF1-215ENST00000487401 FOXS1O43638 330 aa11.82□□□□□ -0.52
SREBF1-215ENST00000487401 SERPINA7P05543 415 aa11.82□□□□□ -0.52
SREBF1-215ENST00000487401 C8GP07360 202 aa11.82□□□□□ -0.52
SREBF1-215ENST00000487401 HIST1H2AGP0C0S8 130 aaPredicted RBP11.82□□□□□ -0.52
SREBF1-215ENST00000487401 COX6A1P12074 109 aa11.82□□□□□ -0.52
SREBF1-215ENST00000487401 HIST1H2ADP20671 130 aa11.82□□□□□ -0.52
SREBF1-215ENST00000487401 TSFMP43897 325 aaKnown RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms