RNA–Protein interactions for RNA: ENST00000487386.1

LINC00888-204, long intergenic non-protein coding RNA 888, humanhuman

BASIC

Gene LINC00888, Length 421 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-204ENST00000487386 WDR78Q5VTH9 848 aa3.52□□□□□ -1.85
LINC00888-204ENST00000487386 NAA16Q6N069 864 aaPredicted RBP3.52□□□□□ -1.85
LINC00888-204ENST00000487386 RBPMS2Q6ZRY4 209 aaKnown RBP3.52□□□□□ -1.85
LINC00888-204ENST00000487386 IL17RELQ6ZVW7 336 aa3.52□□□□□ -1.85
LINC00888-204ENST00000487386 PLPPR4Q7Z2D5 763 aa3.52□□□□□ -1.85
LINC00888-204ENST00000487386 LGI2Q8N0V4 545 aa3.52□□□□□ -1.85
LINC00888-204ENST00000487386 PRSS33Q8NF86 280 aa3.52□□□□□ -1.85
LINC00888-204ENST00000487386 VANGL1Q8TAA9 524 aaPredicted RBP3.52□□□□□ -1.85
LINC00888-204ENST00000487386 SMAP2Q8WU79 429 aaPredicted RBP3.52□□□□□ -1.85
LINC00888-204ENST00000487386 APOBEC4Q8WW27 367 aaKnown RBP3.52□□□□□ -1.85
LINC00888-204ENST00000487386 SLCO2A1Q92959 643 aa3.52□□□□□ -1.85
LINC00888-204ENST00000487386 THOC1Q96FV9 657 aaKnown RBP3.52□□□□□ -1.85
LINC00888-204ENST00000487386 NSMCE3Q96MG7 304 aa3.52□□□□□ -1.85
LINC00888-204ENST00000487386 MUS81Q96NY9 551 aa3.52□□□□□ -1.85
LINC00888-204ENST00000487386 IWS1Q96ST2 819 aa3.52□□□□□ -1.85
LINC00888-204ENST00000487386 EGFL8Q99944 293 aa3.52□□□□□ -1.85
LINC00888-204ENST00000487386 PKP2Q99959 881 aa3.52□□□□□ -1.85
LINC00888-204ENST00000487386 CCDC3Q9BQI4 270 aa3.52□□□□□ -1.85
LINC00888-204ENST00000487386 TRIM51Q9BSJ1 452 aa3.52□□□□□ -1.85
LINC00888-204ENST00000487386 CDH20Q9HBT6 801 aa3.52□□□□□ -1.85
LINC00888-204ENST00000487386 PPANQ9NQ55 473 aaKnown RBP3.52□□□□□ -1.85
LINC00888-204ENST00000487386 CFDP1Q9UEE9 299 aaPredicted RBP3.52□□□□□ -1.85
LINC00888-204ENST00000487386 PPP1R3CQ9UQK1 317 aa3.52□□□□□ -1.85
LINC00888-204ENST00000487386 EFCAB6Q5THR3 1501 aa3.52□□□□□ -1.85
LINC00888-204ENST00000487386 ARHGEF12Q9NZN5 1544 aa3.52□□□□□ -1.85
LINC00888-204ENST00000487386 BCORL1Q5H9F3 1711 aa3.52□□□□□ -1.85
LINC00888-204ENST00000487386 MBD5Q9P267 1494 aa3.52□□□□□ -1.85
LINC00888-204ENST00000487386 CD109Q6YHK3 1445 aa3.52□□□□□ -1.85
LINC00888-204ENST00000487386 DHX57Q6P158 1386 aaKnown RBP3.51□□□□□ -1.85
LINC00888-204ENST00000487386 ANKRD30AQ9BXX3 1397 aa3.51□□□□□ -1.85
LINC00888-204ENST00000487386 IGKV3D-20A0A0C4DH25 116 aa3.51□□□□□ -1.85
LINC00888-204ENST00000487386 TRBC2A0A5B9 178 aa3.51□□□□□ -1.85
LINC00888-204ENST00000487386 SYNDIG1LA6NDD5 238 aa3.51□□□□□ -1.85
LINC00888-204ENST00000487386 ERI2A8K979 691 aaKnown RBP3.51□□□□□ -1.85
LINC00888-204ENST00000487386 EPHB6O15197 1021 aa3.51□□□□□ -1.85
LINC00888-204ENST00000487386 SAGP10523 405 aaPredicted RBP3.51□□□□□ -1.85
LINC00888-204ENST00000487386 SLC2A2P11168 524 aaPredicted RBP3.51□□□□□ -1.85
LINC00888-204ENST00000487386 IRF2P14316 349 aa3.51□□□□□ -1.85
LINC00888-204ENST00000487386 PCGF2P35227 344 aa3.51□□□□□ -1.85
LINC00888-204ENST00000487386 VAMP7P51809 220 aa3.51□□□□□ -1.85
LINC00888-204ENST00000487386 GSCP56915 257 aaPredicted RBP3.51□□□□□ -1.85
LINC00888-204ENST00000487386 PHKG1Q16816 387 aa3.51□□□□□ -1.85
LINC00888-204ENST00000487386 LETM2Q2VYF4 491 aa3.51□□□□□ -1.85
LINC00888-204ENST00000487386 ERMARDQ5T6L9 678 aa3.51□□□□□ -1.85
LINC00888-204ENST00000487386 WLSQ5T9L3 541 aa3.51□□□□□ -1.85
LINC00888-204ENST00000487386 BSPRYQ5W0U4 402 aa3.51□□□□□ -1.85
LINC00888-204ENST00000487386 CENPVQ7Z7K6 275 aaPredicted RBP3.51□□□□□ -1.85
LINC00888-204ENST00000487386 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.51□□□□□ -1.85
LINC00888-204ENST00000487386 OR4K1Q8NGD4 311 aa3.51□□□□□ -1.85
LINC00888-204ENST00000487386 ANKRD9Q96BM1 317 aaPredicted RBP3.51□□□□□ -1.85
LINC00888-204ENST00000487386 FAM71F1Q96KD3 344 aaPredicted RBP3.51□□□□□ -1.85
LINC00888-204ENST00000487386 AGAP3Q96P47 875 aa3.51□□□□□ -1.85
LINC00888-204ENST00000487386 CPNE1Q99829 537 aa3.51□□□□□ -1.85
LINC00888-204ENST00000487386 WWTR1Q9GZV5 400 aa3.51□□□□□ -1.85
LINC00888-204ENST00000487386 PANK4Q9NVE7 773 aa3.51□□□□□ -1.85
LINC00888-204ENST00000487386 DENND4BO75064 1496 aaPredicted RBP3.51□□□□□ -1.85
LINC00888-204ENST00000487386 MROH2AA6NES4 1674 aa3.51□□□□□ -1.85
LINC00888-204ENST00000487386 ANKRD50Q9ULJ7 1429 aa3.51□□□□□ -1.85
LINC00888-204ENST00000487386 KIAA1107Q9UPP5 1409 aa3.51□□□□□ -1.85
LINC00888-204ENST00000487386 TRAPPC8Q9Y2L5 1435 aa3.51□□□□□ -1.85
LINC00888-204ENST00000487386 E9PCH4 1651 aa3.5□□□□□ -1.85
LINC00888-204ENST00000487386 TADA2AO75478 443 aa3.5□□□□□ -1.85
LINC00888-204ENST00000487386 ATP5BP06576 529 aaKnown RBP3.5□□□□□ -1.85
LINC00888-204ENST00000487386 EPCAMP16422 314 aa3.5□□□□□ -1.85
LINC00888-204ENST00000487386 CD27P26842 260 aa3.5□□□□□ -1.85
LINC00888-204ENST00000487386 HNF4AP41235 474 aa3.5□□□□□ -1.85
LINC00888-204ENST00000487386 RAD52P43351 418 aa3.5□□□□□ -1.85
LINC00888-204ENST00000487386 CSE1LP55060 971 aaKnown RBP3.5□□□□□ -1.85
LINC00888-204ENST00000487386 HUNKP57058 714 aa3.5□□□□□ -1.85
LINC00888-204ENST00000487386 RALGDSQ12967 914 aa3.5□□□□□ -1.85
LINC00888-204ENST00000487386 NPTX1Q15818 432 aa3.5□□□□□ -1.85
LINC00888-204ENST00000487386 EXT1Q16394 746 aa3.5□□□□□ -1.85
LINC00888-204ENST00000487386 ZNF74Q16587 644 aa3.5□□□□□ -1.85
LINC00888-204ENST00000487386 SNAI3Q3KNW1 292 aa3.5□□□□□ -1.85
LINC00888-204ENST00000487386 LEKR1Q6ZMV7 388 aa3.5□□□□□ -1.85
LINC00888-204ENST00000487386 IQCHQ86VS3 1027 aa3.5□□□□□ -1.85
LINC00888-204ENST00000487386 NDUFAF2Q8N183 169 aa3.5□□□□□ -1.85
LINC00888-204ENST00000487386 TTC30BQ8N4P2 665 aa3.5□□□□□ -1.85
LINC00888-204ENST00000487386 XXYLT1Q8NBI6 393 aa3.5□□□□□ -1.85
LINC00888-204ENST00000487386 GPRC5AQ8NFJ5 357 aa3.5□□□□□ -1.85
LINC00888-204ENST00000487386 OR10Q1Q8NGQ4 319 aa3.5□□□□□ -1.85
LINC00888-204ENST00000487386 GTF3AQ92664 365 aaKnown RBP3.5□□□□□ -1.85
LINC00888-204ENST00000487386 CENPTQ96BT3 561 aa3.5□□□□□ -1.85
LINC00888-204ENST00000487386 PGAP3Q96FM1 320 aaPredicted RBP3.5□□□□□ -1.85
LINC00888-204ENST00000487386 C4orf45Q96LM5 186 aa3.5□□□□□ -1.85
LINC00888-204ENST00000487386 NECTIN4Q96NY8 510 aa3.5□□□□□ -1.85
LINC00888-204ENST00000487386 USP28Q96RU2 1077 aa3.5□□□□□ -1.85
LINC00888-204ENST00000487386 SLF1Q9BQI6 1058 aa3.5□□□□□ -1.85
LINC00888-204ENST00000487386 PYGO2Q9BRQ0 406 aa3.5□□□□□ -1.85
LINC00888-204ENST00000487386 ZMYND12Q9H0C1 365 aa3.5□□□□□ -1.85
LINC00888-204ENST00000487386 FAM49AQ9H0Q0 323 aaPredicted RBP3.5□□□□□ -1.85
LINC00888-204ENST00000487386 CHST11Q9NPF2 352 aa3.5□□□□□ -1.85
LINC00888-204ENST00000487386 ANKEF1Q9NU02 776 aa3.5□□□□□ -1.85
LINC00888-204ENST00000487386 CPSF3Q9UKF6 684 aaKnown RBP3.5□□□□□ -1.85
LINC00888-204ENST00000487386 REREQ9P2R6 1566 aa3.5□□□□□ -1.85
LINC00888-204ENST00000487386 SIGLEC1Q9BZZ2 1709 aa3.5□□□□□ -1.85
LINC00888-204ENST00000487386 TRPM2O94759 1503 aa3.49□□□□□ -1.85
LINC00888-204ENST00000487386 A2MP01023 1474 aa3.49□□□□□ -1.85
LINC00888-204ENST00000487386 COL5A2P05997 1499 aaPredicted RBP3.49□□□□□ -1.85
LINC00888-204ENST00000487386 PZPP20742 1482 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms