RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 CPPED1Q9BRF8 314 aaPredicted RBP12.01□□□□□ -0.49
HSPG2-211ENST00000486901 CCM2Q9BSQ5 444 aa12.01□□□□□ -0.49
HSPG2-211ENST00000486901 FAM126AQ9BYI3 521 aaPredicted RBP12.01□□□□□ -0.49
HSPG2-211ENST00000486901 FBXO8Q9NRD0 319 aa12.01□□□□□ -0.49
HSPG2-211ENST00000486901 ILVBLA1L0T0 632 aa12.01□□□□□ -0.49
HSPG2-211ENST00000486901 SLC16A6O15403 523 aa12.01□□□□□ -0.49
HSPG2-211ENST00000486901 KIAA0513O60268 411 aa12.01□□□□□ -0.49
HSPG2-211ENST00000486901 RYKP34925 604 aa12.01□□□□□ -0.49
HSPG2-211ENST00000486901 PIK3CBP42338 1070 aa12.01□□□□□ -0.49
HSPG2-211ENST00000486901 RHOAP61586 193 aa12.01□□□□□ -0.49
HSPG2-211ENST00000486901 GRB14Q14449 540 aa12.01□□□□□ -0.49
HSPG2-211ENST00000486901 PARP15Q460N3 678 aa12.01□□□□□ -0.49
HSPG2-211ENST00000486901 SHQ1Q6PI26 577 aaKnown RBP12.01□□□□□ -0.49
HSPG2-211ENST00000486901 ABI3BPQ7Z7G0 1075 aa12.01□□□□□ -0.49
HSPG2-211ENST00000486901 SYT12Q8IV01 421 aa12.01□□□□□ -0.49
HSPG2-211ENST00000486901 BEND7Q8N7W2 519 aaPredicted RBP12.01□□□□□ -0.49
HSPG2-211ENST00000486901 SLC38A4Q969I6 547 aa12.01□□□□□ -0.49
HSPG2-211ENST00000486901 TRNT1Q96Q11 434 aaKnown RBP12.01□□□□□ -0.49
HSPG2-211ENST00000486901 CLMPQ9H6B4 373 aa12.01□□□□□ -0.49
HSPG2-211ENST00000486901 SNTG1Q9NSN8 517 aa12.01□□□□□ -0.49
HSPG2-211ENST00000486901 THG1LQ9NWX6 298 aaKnown RBP12.01□□□□□ -0.49
HSPG2-211ENST00000486901 KLKB1P03952 638 aa12□□□□□ -0.49
HSPG2-211ENST00000486901 IL6P05231 212 aa12□□□□□ -0.49
HSPG2-211ENST00000486901 ZNF865P0CJ78 1059 aaPredicted RBP12□□□□□ -0.49
HSPG2-211ENST00000486901 LAMP1P11279 417 aa12□□□□□ -0.49
HSPG2-211ENST00000486901 RPL9P32969 192 aaKnown RBP12□□□□□ -0.49
HSPG2-211ENST00000486901 KDELR2P33947 212 aa12□□□□□ -0.49
HSPG2-211ENST00000486901 CRATP43155 626 aa12□□□□□ -0.49
HSPG2-211ENST00000486901 RAB25P57735 213 aa12□□□□□ -0.49
HSPG2-211ENST00000486901 ACOX1Q15067 660 aa12□□□□□ -0.49
HSPG2-211ENST00000486901 LEXMQ3ZCV2 418 aa12□□□□□ -0.49
HSPG2-211ENST00000486901 SPANXN2Q5MJ10 180 aa12□□□□□ -0.49
HSPG2-211ENST00000486901 NEK5Q6P3R8 708 aa12□□□□□ -0.49
HSPG2-211ENST00000486901 ANKS3Q6ZW76 656 aa12□□□□□ -0.49
HSPG2-211ENST00000486901 ADAMTSL2Q86TH1 951 aa12□□□□□ -0.49
HSPG2-211ENST00000486901 MEX3DQ86XN8 651 aaKnown RBP12□□□□□ -0.49
HSPG2-211ENST00000486901 LRRC49Q8IUZ0 686 aa12□□□□□ -0.49
HSPG2-211ENST00000486901 KCNJ9Q92806 393 aa12□□□□□ -0.49
HSPG2-211ENST00000486901 GGHQ92820 318 aa12□□□□□ -0.49
HSPG2-211ENST00000486901 GPR62Q9BZJ7 368 aa12□□□□□ -0.49
HSPG2-211ENST00000486901 NUDT4Q9NZJ9 180 aa12□□□□□ -0.49
HSPG2-211ENST00000486901 OSGIN1Q9UJX0 560 aa12□□□□□ -0.49
HSPG2-211ENST00000486901 PCDHGB6Q9Y5F9 930 aa12□□□□□ -0.49
HSPG2-211ENST00000486901 PCDHGA6Q9Y5G7 932 aa12□□□□□ -0.49
HSPG2-211ENST00000486901 WDR90Q96KV7 1748 aa12□□□□□ -0.49
HSPG2-211ENST00000486901 METTL15A6NJ78 407 aa12□□□□□ -0.49
HSPG2-211ENST00000486901 STK16O75716 305 aa12□□□□□ -0.49
HSPG2-211ENST00000486901 RPIAP49247 311 aa12□□□□□ -0.49
HSPG2-211ENST00000486901 CPT1AP50416 773 aa12□□□□□ -0.49
HSPG2-211ENST00000486901 SNRPD2P62316 118 aaKnown RBP12□□□□□ -0.49
HSPG2-211ENST00000486901 LRRC74AQ0VAA2 488 aa12□□□□□ -0.49
HSPG2-211ENST00000486901 GRIK2Q13002 908 aa12□□□□□ -0.49
HSPG2-211ENST00000486901 SLAMF1Q13291 335 aa12□□□□□ -0.49
HSPG2-211ENST00000486901 ZXDCQ2QGD7 858 aaPredicted RBP12□□□□□ -0.49
HSPG2-211ENST00000486901 POM121L1PQ3SYA9 428 aa12□□□□□ -0.49
HSPG2-211ENST00000486901 LYPD8Q6UX82 237 aa12□□□□□ -0.49
HSPG2-211ENST00000486901 SNX20Q7Z614 316 aa12□□□□□ -0.49
HSPG2-211ENST00000486901 TP53I13Q8NBR0 393 aaPredicted RBP12□□□□□ -0.49
HSPG2-211ENST00000486901 PHF10Q8WUB8 498 aaKnown RBP12□□□□□ -0.49
HSPG2-211ENST00000486901 TMEM246Q9BRR3 403 aa12□□□□□ -0.49
HSPG2-211ENST00000486901 CD244Q9BZW8 370 aa12□□□□□ -0.49
HSPG2-211ENST00000486901 IMPAD1Q9NX62 359 aa12□□□□□ -0.49
HSPG2-211ENST00000486901 DHRS7Q9Y394 339 aa12□□□□□ -0.49
HSPG2-211ENST00000486901 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12□□□□□ -0.49
HSPG2-211ENST00000486901 SMAD6O43541 496 aaKnown RBP12□□□□□ -0.49
HSPG2-211ENST00000486901 DYRK3O43781 588 aa12□□□□□ -0.49
HSPG2-211ENST00000486901 S100A1P23297 94 aa12□□□□□ -0.49
HSPG2-211ENST00000486901 ZNF177Q13360 481 aaPredicted RBP12□□□□□ -0.49
HSPG2-211ENST00000486901 CHRNA6Q15825 494 aa12□□□□□ -0.49
HSPG2-211ENST00000486901 CCDC85BQ15834 202 aaPredicted RBP12□□□□□ -0.49
HSPG2-211ENST00000486901 ATAD3CQ5T2N8 411 aa12□□□□□ -0.49
HSPG2-211ENST00000486901 KDM4DQ6B0I6 523 aa12□□□□□ -0.49
HSPG2-211ENST00000486901 HS6ST3Q8IZP7 471 aa12□□□□□ -0.49
HSPG2-211ENST00000486901 DEPDC7Q96QD5 511 aa12□□□□□ -0.49
HSPG2-211ENST00000486901 C11orf16Q9NQ32 467 aa12□□□□□ -0.49
HSPG2-211ENST00000486901 MS4A12Q9NXJ0 267 aa12□□□□□ -0.49
HSPG2-211ENST00000486901 MUTYHQ9UIF7 546 aa12□□□□□ -0.49
HSPG2-211ENST00000486901 DUSP12Q9UNI6 340 aa12□□□□□ -0.49
HSPG2-211ENST00000486901 SCML2Q9UQR0 700 aa12□□□□□ -0.49
HSPG2-211ENST00000486901 PABPN1LA6NDY0 278 aaKnown RBP11.99□□□□□ -0.49
HSPG2-211ENST00000486901 MEN1O00255 615 aa11.99□□□□□ -0.49
HSPG2-211ENST00000486901 TPST2O60704 377 aa11.99□□□□□ -0.49
HSPG2-211ENST00000486901 HOXD11P31277 338 aaPredicted RBP11.99□□□□□ -0.49
HSPG2-211ENST00000486901 DNAJA1P31689 397 aaKnown RBP11.99□□□□□ -0.49
HSPG2-211ENST00000486901 KIR3DL1P43629 444 aa11.99□□□□□ -0.49
HSPG2-211ENST00000486901 SPIBQ01892 262 aa11.99□□□□□ -0.49
HSPG2-211ENST00000486901 FXNQ16595 210 aa11.99□□□□□ -0.49
HSPG2-211ENST00000486901 PLEKHG6Q3KR16 790 aa11.99□□□□□ -0.49
HSPG2-211ENST00000486901 ZNF852Q6ZMS4 543 aa11.99□□□□□ -0.49
HSPG2-211ENST00000486901 MED8Q96G25 268 aa11.99□□□□□ -0.49
HSPG2-211ENST00000486901 PSKH2Q96QS6 385 aa11.99□□□□□ -0.49
HSPG2-211ENST00000486901 SH3GL1Q99961 368 aa11.99□□□□□ -0.49
HSPG2-211ENST00000486901 TRIM62Q9BVG3 475 aa11.99□□□□□ -0.49
HSPG2-211ENST00000486901 POPDC3Q9HBV1 291 aa11.99□□□□□ -0.49
HSPG2-211ENST00000486901 IL1RAPQ9NPH3 570 aa11.99□□□□□ -0.49
HSPG2-211ENST00000486901 TRPV5Q9NQA5 729 aa11.99□□□□□ -0.49
HSPG2-211ENST00000486901 TMEM98Q9Y2Y6 226 aa11.99□□□□□ -0.49
HSPG2-211ENST00000486901 NUMA1Q14980 2115 aa11.99□□□□□ -0.49
HSPG2-211ENST00000486901 NOTOA8MTQ0 251 aa11.99□□□□□ -0.49
HSPG2-211ENST00000486901 SMLR1H3BR10 107 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms