RNA–Protein interactions for RNA: ENST00000485530.5

TRA2B-213, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 839 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-213ENST00000485530 EBLN1P0CF75 366 aa11.74□□□□□ -0.53
TRA2B-213ENST00000485530 CCT5P48643 541 aa11.74□□□□□ -0.53
TRA2B-213ENST00000485530 ALDH18A1P54886 795 aaKnown RBP11.74□□□□□ -0.53
TRA2B-213ENST00000485530 HSD11B2P80365 405 aa11.74□□□□□ -0.53
TRA2B-213ENST00000485530 MC2RQ01718 297 aa11.74□□□□□ -0.53
TRA2B-213ENST00000485530 SETDB1Q15047 1291 aa11.74□□□□□ -0.53
TRA2B-213ENST00000485530 GPR19Q15760 415 aa11.74□□□□□ -0.53
TRA2B-213ENST00000485530 CATSPEREQ5SY80 951 aa11.74□□□□□ -0.53
TRA2B-213ENST00000485530 BROXQ5VW32 411 aa11.74□□□□□ -0.53
TRA2B-213ENST00000485530 PRAMEF13Q5VWM6 474 aa11.74□□□□□ -0.53
TRA2B-213ENST00000485530 CAPN13Q6MZZ7 669 aaPredicted RBP11.74□□□□□ -0.53
TRA2B-213ENST00000485530 LCTLQ6UWM7 567 aa11.74□□□□□ -0.53
TRA2B-213ENST00000485530 PAQR7Q86WK9 346 aa11.74□□□□□ -0.53
TRA2B-213ENST00000485530 AGBL5Q8NDL9 886 aa11.74□□□□□ -0.53
TRA2B-213ENST00000485530 OR4K1Q8NGD4 311 aa11.74□□□□□ -0.53
TRA2B-213ENST00000485530 NEIL2Q969S2 332 aa11.74□□□□□ -0.53
TRA2B-213ENST00000485530 ZUFSPQ96AP4 578 aa11.74□□□□□ -0.53
TRA2B-213ENST00000485530 TLCD1Q96CP7 247 aa11.74□□□□□ -0.53
TRA2B-213ENST00000485530 RNF31Q96EP0 1072 aa11.74□□□□□ -0.53
TRA2B-213ENST00000485530 SPNS1Q9H2V7 528 aa11.74□□□□□ -0.53
TRA2B-213ENST00000485530 MRPS30Q9NP92 439 aaKnown RBP11.74□□□□□ -0.53
TRA2B-213ENST00000485530 ARGLU1Q9NWB6 273 aaPredicted RBP11.74□□□□□ -0.53
TRA2B-213ENST00000485530 MKS1Q9NXB0 559 aa11.74□□□□□ -0.53
TRA2B-213ENST00000485530 GRID1Q9ULK0 1009 aa11.74□□□□□ -0.53
TRA2B-213ENST00000485530 BTRCQ9Y297 605 aa11.74□□□□□ -0.53
TRA2B-213ENST00000485530 LOXL2Q9Y4K0 774 aa11.74□□□□□ -0.53
TRA2B-213ENST00000485530 KIF26BQ2KJY2 2108 aa11.74□□□□□ -0.53
TRA2B-213ENST00000485530 CCDC187A0A096LP49 1063 aa11.73□□□□□ -0.53
TRA2B-213ENST00000485530 LOC105369274A0A096LPK9 316 aa11.73□□□□□ -0.53
TRA2B-213ENST00000485530 LOC102723532A0A0G2JNH3 316 aa11.73□□□□□ -0.53
TRA2B-213ENST00000485530 OR2A25A4D2G3 310 aa11.73□□□□□ -0.53
TRA2B-213ENST00000485530 SYCE1LA8MT33 242 aa11.73□□□□□ -0.53
TRA2B-213ENST00000485530 A8MT66 165 aa11.73□□□□□ -0.53
TRA2B-213ENST00000485530 TMX2-CTNND1H3BSU7 103 aa11.73□□□□□ -0.53
TRA2B-213ENST00000485530 PLD2O14939 933 aa11.73□□□□□ -0.53
TRA2B-213ENST00000485530 LCMT2O60294 686 aaKnown RBP11.73□□□□□ -0.53
TRA2B-213ENST00000485530 GLRA3O75311 464 aa11.73□□□□□ -0.53
TRA2B-213ENST00000485530 STK16O75716 305 aa11.73□□□□□ -0.53
TRA2B-213ENST00000485530 WDR47O94967 919 aa11.73□□□□□ -0.53
TRA2B-213ENST00000485530 MYZAPP0CAP1 466 aa11.73□□□□□ -0.53
TRA2B-213ENST00000485530 CDH1P12830 882 aa11.73□□□□□ -0.53
TRA2B-213ENST00000485530 CMPK1P30085 196 aa11.73□□□□□ -0.53
TRA2B-213ENST00000485530 CSTF2P33240 577 aaKnown RBP eCLIP11.73□□□□□ -0.53
TRA2B-213ENST00000485530 SNRPNP63162 240 aaKnown RBP11.73□□□□□ -0.53
TRA2B-213ENST00000485530 CSNK1G2P78368 415 aa11.73□□□□□ -0.53
TRA2B-213ENST00000485530 PCBP2Q15366 365 aaKnown RBP eCLIP11.73□□□□□ -0.53
TRA2B-213ENST00000485530 C3orf38Q5JPI3 329 aa11.73□□□□□ -0.53
TRA2B-213ENST00000485530 THEMIS2Q5TEJ8 643 aa11.73□□□□□ -0.53
TRA2B-213ENST00000485530 PRAMEF17Q5VTA0 474 aa11.73□□□□□ -0.53
TRA2B-213ENST00000485530 FAM219BQ5XKK7 198 aa11.73□□□□□ -0.53
TRA2B-213ENST00000485530 SLCO4C1Q6ZQN7 724 aa11.73□□□□□ -0.53
TRA2B-213ENST00000485530 KMT5CQ86Y97 462 aa11.73□□□□□ -0.53
TRA2B-213ENST00000485530 PLD3Q8IV08 490 aa11.73□□□□□ -0.53
TRA2B-213ENST00000485530 OR4N4Q8N0Y3 316 aa11.73□□□□□ -0.53
TRA2B-213ENST00000485530 CNPY4Q8N129 248 aa11.73□□□□□ -0.53
TRA2B-213ENST00000485530 CARFQ8N187 725 aa11.73□□□□□ -0.53
TRA2B-213ENST00000485530 FBXO39Q8N4B4 442 aa11.73□□□□□ -0.53
TRA2B-213ENST00000485530 PTGR2Q8N8N7 351 aaPredicted RBP11.73□□□□□ -0.53
TRA2B-213ENST00000485530 C19orf47Q8N9M1 422 aaKnown RBP11.73□□□□□ -0.53
TRA2B-213ENST00000485530 ZNF740Q8NDX6 193 aa11.73□□□□□ -0.53
TRA2B-213ENST00000485530 ABHD11Q8NFV4 315 aa11.73□□□□□ -0.53
TRA2B-213ENST00000485530 TCP10LQ8TDR4 215 aa11.73□□□□□ -0.53
TRA2B-213ENST00000485530 UBTD2Q8WUN7 234 aa11.73□□□□□ -0.53
TRA2B-213ENST00000485530 SNRNP27Q8WVK2 155 aaKnown RBP11.73□□□□□ -0.53
TRA2B-213ENST00000485530 GRAMD1AQ96CP6 724 aa11.73□□□□□ -0.53
TRA2B-213ENST00000485530 TCTN2Q96GX1 697 aa11.73□□□□□ -0.53
TRA2B-213ENST00000485530 APOPT1Q96IL0 206 aa11.73□□□□□ -0.53
TRA2B-213ENST00000485530 TSNARE1Q96NA8 513 aa11.73□□□□□ -0.53
TRA2B-213ENST00000485530 NSUN5Q96P11 429 aaKnown RBP11.73□□□□□ -0.53
TRA2B-213ENST00000485530 CMKLR1Q99788 373 aa11.73□□□□□ -0.53
TRA2B-213ENST00000485530 CTRCQ99895 268 aa11.73□□□□□ -0.53
TRA2B-213ENST00000485530 SH3GL2Q99962 352 aa11.73□□□□□ -0.53
TRA2B-213ENST00000485530 PLCD4Q9BRC7 762 aa11.73□□□□□ -0.53
TRA2B-213ENST00000485530 CHRNA10Q9GZZ6 450 aa11.73□□□□□ -0.53
TRA2B-213ENST00000485530 ZMYND15Q9H091 742 aa11.73□□□□□ -0.53
TRA2B-213ENST00000485530 VIPAS39Q9H9C1 493 aa11.73□□□□□ -0.53
TRA2B-213ENST00000485530 ZBTB26Q9HCK0 441 aa11.73□□□□□ -0.53
TRA2B-213ENST00000485530 WWOXQ9NZC7 414 aa11.73□□□□□ -0.53
TRA2B-213ENST00000485530 BSNQ9UPA5 3926 aa11.73□□□□□ -0.53
TRA2B-213ENST00000485530 A0A1B0GTL3 188 aa11.72□□□□□ -0.53
TRA2B-213ENST00000485530 C9orf172C9J069 976 aa11.72□□□□□ -0.53
TRA2B-213ENST00000485530 E2F3O00716 465 aa11.72□□□□□ -0.53
TRA2B-213ENST00000485530 CCNT2O60583 730 aaKnown RBP11.72□□□□□ -0.53
TRA2B-213ENST00000485530 TIAF1O95411 115 aa11.72□□□□□ -0.53
TRA2B-213ENST00000485530 GFAPP14136 432 aa11.72□□□□□ -0.53
TRA2B-213ENST00000485530 CD22P20273 847 aa11.72□□□□□ -0.53
TRA2B-213ENST00000485530 CCND1P24385 295 aa11.72□□□□□ -0.53
TRA2B-213ENST00000485530 VARSP26640 1264 aaKnown RBP11.72□□□□□ -0.53
TRA2B-213ENST00000485530 EEF1DP29692 281 aaKnown RBP11.72□□□□□ -0.53
TRA2B-213ENST00000485530 ETV4P43268 484 aa11.72□□□□□ -0.53
TRA2B-213ENST00000485530 PRKAA2P54646 552 aa11.72□□□□□ -0.53
TRA2B-213ENST00000485530 ABATP80404 500 aa11.72□□□□□ -0.53
TRA2B-213ENST00000485530 MEF2AQ02078 507 aaPredicted RBP11.72□□□□□ -0.53
TRA2B-213ENST00000485530 DEFB110Q30KQ9 67 aa11.72□□□□□ -0.53
TRA2B-213ENST00000485530 UNC50Q53HI1 259 aa11.72□□□□□ -0.53
TRA2B-213ENST00000485530 TTMPQ5BVD1 217 aa11.72□□□□□ -0.53
TRA2B-213ENST00000485530 FRMPD2BQ6IN97 320 aa11.72□□□□□ -0.53
TRA2B-213ENST00000485530 FOXR1Q6PIV2 292 aa11.72□□□□□ -0.53
TRA2B-213ENST00000485530 NXPE4Q6UWF7 544 aa11.72□□□□□ -0.53
TRA2B-213ENST00000485530 ZYG11AQ6WRX3 759 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms