RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 LRRTM4Q86VH4 590 aa10.42□□□□□ -0.74
DDX56-212ENST00000485367 LILRA2Q8N149 483 aa10.42□□□□□ -0.74
DDX56-212ENST00000485367 BHLHE22Q8NFJ8 381 aaPredicted RBP10.42□□□□□ -0.74
DDX56-212ENST00000485367 OR4D9Q8NGE8 314 aa10.42□□□□□ -0.74
DDX56-212ENST00000485367 ZNF420Q8TAQ5 688 aaPredicted RBP10.42□□□□□ -0.74
DDX56-212ENST00000485367 USP7Q93009 1102 aa10.42□□□□□ -0.74
DDX56-212ENST00000485367 BORCS5Q969J3 196 aa10.42□□□□□ -0.74
DDX56-212ENST00000485367 RMND5BQ96G75 393 aaPredicted RBP10.42□□□□□ -0.74
DDX56-212ENST00000485367 VPS35Q96QK1 796 aa10.42□□□□□ -0.74
DDX56-212ENST00000485367 UBL7Q96S82 380 aaPredicted RBP10.42□□□□□ -0.74
DDX56-212ENST00000485367 CDRT15Q96T59 188 aa10.42□□□□□ -0.74
DDX56-212ENST00000485367 PKP2Q99959 881 aa10.42□□□□□ -0.74
DDX56-212ENST00000485367 APOL2Q9BQE5 337 aa10.42□□□□□ -0.74
DDX56-212ENST00000485367 SARS2Q9NP81 518 aaKnown RBP10.42□□□□□ -0.74
DDX56-212ENST00000485367 TMEM9Q9P0T7 183 aa10.42□□□□□ -0.74
DDX56-212ENST00000485367 SUCOQ9UBS9 1254 aaKnown RBP10.42□□□□□ -0.74
DDX56-212ENST00000485367 PKP3Q9Y446 797 aa10.42□□□□□ -0.74
DDX56-212ENST00000485367 A0A087WXM4 84 aa10.42□□□□□ -0.74
DDX56-212ENST00000485367 PRAMEF33A0A0G2JMD5 474 aa10.42□□□□□ -0.74
DDX56-212ENST00000485367 A6NCN8 305 aa10.42□□□□□ -0.74
DDX56-212ENST00000485367 OR5K4A6NMS3 321 aa10.42□□□□□ -0.74
DDX56-212ENST00000485367 PDZK1P1A8MUH7 402 aa10.42□□□□□ -0.74
DDX56-212ENST00000485367 ACOT8O14734 319 aa10.42□□□□□ -0.74
DDX56-212ENST00000485367 AIM2O14862 343 aa10.42□□□□□ -0.74
DDX56-212ENST00000485367 STX7O15400 261 aaKnown RBP10.42□□□□□ -0.74
DDX56-212ENST00000485367 PRAMEF10O60809 474 aa10.42□□□□□ -0.74
DDX56-212ENST00000485367 CCL4P13236 92 aa10.42□□□□□ -0.74
DDX56-212ENST00000485367 XRCC1P18887 633 aaPredicted RBP10.42□□□□□ -0.74
DDX56-212ENST00000485367 UGT1A6P19224 532 aa10.42□□□□□ -0.74
DDX56-212ENST00000485367 UGT1A1P22309 533 aa10.42□□□□□ -0.74
DDX56-212ENST00000485367 UGT1A4P22310 534 aa10.42□□□□□ -0.74
DDX56-212ENST00000485367 PSMB4P28070 264 aa10.42□□□□□ -0.74
DDX56-212ENST00000485367 UGT1A3P35503 534 aa10.42□□□□□ -0.74
DDX56-212ENST00000485367 SPAM1P38567 509 aa10.42□□□□□ -0.74
DDX56-212ENST00000485367 GP5P40197 560 aa10.42□□□□□ -0.74
DDX56-212ENST00000485367 GPLD1P80108 840 aa10.42□□□□□ -0.74
DDX56-212ENST00000485367 CDKL1Q00532 357 aa10.42□□□□□ -0.74
DDX56-212ENST00000485367 CFHR1Q03591 330 aa10.42□□□□□ -0.74
DDX56-212ENST00000485367 TRAP1Q12931 704 aaKnown RBP10.42□□□□□ -0.74
DDX56-212ENST00000485367 SQSTM1Q13501 440 aa10.42□□□□□ -0.74
DDX56-212ENST00000485367 GTF2H3Q13889 308 aa10.42□□□□□ -0.74
DDX56-212ENST00000485367 PTPRCAPQ14761 206 aa10.42□□□□□ -0.74
DDX56-212ENST00000485367 INAQ16352 499 aa10.42□□□□□ -0.74
DDX56-212ENST00000485367 SNAP47Q5SQN1 464 aa10.42□□□□□ -0.74
DDX56-212ENST00000485367 ZDHHC20Q5W0Z9 365 aa10.42□□□□□ -0.74
DDX56-212ENST00000485367 SNX32Q86XE0 403 aa10.42□□□□□ -0.74
DDX56-212ENST00000485367 RDH11Q8TC12 318 aa10.42□□□□□ -0.74
DDX56-212ENST00000485367 EME1Q96AY2 570 aa10.42□□□□□ -0.74
DDX56-212ENST00000485367 SH3KBP1Q96B97 665 aa10.42□□□□□ -0.74
DDX56-212ENST00000485367 ASB9Q96DX5 294 aa10.42□□□□□ -0.74
DDX56-212ENST00000485367 COX4I2Q96KJ9 171 aa10.42□□□□□ -0.74
DDX56-212ENST00000485367 CPNE1Q99829 537 aa10.42□□□□□ -0.74
DDX56-212ENST00000485367 DPYSL5Q9BPU6 564 aa10.42□□□□□ -0.74
DDX56-212ENST00000485367 TIMM29Q9BSF4 260 aa10.42□□□□□ -0.74
DDX56-212ENST00000485367 ANKRD60Q9BZ19 345 aa10.42□□□□□ -0.74
DDX56-212ENST00000485367 SHCBP1LQ9BZQ2 653 aa10.42□□□□□ -0.74
DDX56-212ENST00000485367 ILKAPQ9H0C8 392 aaPredicted RBP10.42□□□□□ -0.74
DDX56-212ENST00000485367 ZNF385DQ9H6B1 395 aa10.42□□□□□ -0.74
DDX56-212ENST00000485367 CLK4Q9HAZ1 481 aaKnown RBP10.42□□□□□ -0.74
DDX56-212ENST00000485367 IL17CQ9P0M4 197 aa10.42□□□□□ -0.74
DDX56-212ENST00000485367 TXNDC16Q9P2K2 825 aa10.42□□□□□ -0.74
DDX56-212ENST00000485367 CPNE7Q9UBL6 633 aa10.42□□□□□ -0.74
DDX56-212ENST00000485367 RAP2CQ9Y3L5 183 aa10.42□□□□□ -0.74
DDX56-212ENST00000485367 MGAQ8IWI9 3026 aa10.41□□□□□ -0.74
DDX56-212ENST00000485367 KIR2DS5A0A0G2JLQ3 304 aa10.41□□□□□ -0.74
DDX56-212ENST00000485367 A0A0G2JNG1 304 aa10.41□□□□□ -0.74
DDX56-212ENST00000485367 GLYATL1P3A0A0U1RQE8 302 aa10.41□□□□□ -0.74
DDX56-212ENST00000485367 TEX51A0A1B0GUA7 166 aa10.41□□□□□ -0.74
DDX56-212ENST00000485367 A8MU76 341 aa10.41□□□□□ -0.74
DDX56-212ENST00000485367 KIR2DS3K7RE56 304 aa10.41□□□□□ -0.74
DDX56-212ENST00000485367 HDAC3O15379 428 aa10.41□□□□□ -0.74
DDX56-212ENST00000485367 DUX1O43812 170 aa10.41□□□□□ -0.74
DDX56-212ENST00000485367 KLHL41O60662 606 aa10.41□□□□□ -0.74
DDX56-212ENST00000485367 TRIM13O60858 407 aa10.41□□□□□ -0.74
DDX56-212ENST00000485367 TYK2P29597 1187 aa10.41□□□□□ -0.74
DDX56-212ENST00000485367 CSTF2P33240 577 aaKnown RBP eCLIP10.41□□□□□ -0.74
DDX56-212ENST00000485367 CLCNKAP51800 687 aa10.41□□□□□ -0.74
DDX56-212ENST00000485367 VAC14Q08AM6 782 aa10.41□□□□□ -0.74
DDX56-212ENST00000485367 TMEM115Q12893 351 aaPredicted RBP10.41□□□□□ -0.74
DDX56-212ENST00000485367 ART3Q13508 389 aa10.41□□□□□ -0.74
DDX56-212ENST00000485367 OLIG2Q13516 323 aa10.41□□□□□ -0.74
DDX56-212ENST00000485367 TRA2AQ13595 282 aaKnown RBP eCLIP10.41□□□□□ -0.74
DDX56-212ENST00000485367 KIR2DS5Q14953 304 aa10.41□□□□□ -0.74
DDX56-212ENST00000485367 TGIF1Q15583 401 aa10.41□□□□□ -0.74
DDX56-212ENST00000485367 ZNF829Q3KNS6 432 aaPredicted RBP10.41□□□□□ -0.74
DDX56-212ENST00000485367 ZBED5Q49AG3 693 aa10.41□□□□□ -0.74
DDX56-212ENST00000485367 SLC9B1Q4ZJI4 515 aa10.41□□□□□ -0.74
DDX56-212ENST00000485367 VWA5B1Q5TIE3 1220 aa10.41□□□□□ -0.74
DDX56-212ENST00000485367 TMEM164Q5U3C3 297 aa10.41□□□□□ -0.74
DDX56-212ENST00000485367 KRT80Q6KB66 452 aa10.41□□□□□ -0.74
DDX56-212ENST00000485367 TMEM71Q6P5X7 295 aa10.41□□□□□ -0.74
DDX56-212ENST00000485367 CCDC81Q6ZN84 652 aa10.41□□□□□ -0.74
DDX56-212ENST00000485367 GPR141Q7Z602 305 aa10.41□□□□□ -0.74
DDX56-212ENST00000485367 ZFAND4Q86XD8 727 aa10.41□□□□□ -0.74
DDX56-212ENST00000485367 TRAPPC5Q8IUR0 188 aa10.41□□□□□ -0.74
DDX56-212ENST00000485367 ZNF547Q8IVP9 402 aa10.41□□□□□ -0.74
DDX56-212ENST00000485367 PACRGLQ8N7B6 248 aa10.41□□□□□ -0.74
DDX56-212ENST00000485367 TNIP2Q8NFZ5 429 aa10.41□□□□□ -0.74
DDX56-212ENST00000485367 BRSK1Q8TDC3 778 aa10.41□□□□□ -0.74
DDX56-212ENST00000485367 HSPBAP1Q96EW2 488 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms