RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 TMEM245Q9H330 911 aa4.2□□□□□ -1.74
VPS13A-211ENST00000484581 UBQLN3Q9H347 655 aa4.2□□□□□ -1.74
VPS13A-211ENST00000484581 CUEDC2Q9H467 287 aa4.2□□□□□ -1.74
VPS13A-211ENST00000484581 RAB9BQ9NP90 201 aa4.2□□□□□ -1.74
VPS13A-211ENST00000484581 POLE3Q9NRF9 147 aa4.2□□□□□ -1.74
VPS13A-211ENST00000484581 MRPL17Q9NRX2 175 aaKnown RBP4.2□□□□□ -1.74
VPS13A-211ENST00000484581 WWOXQ9NZC7 414 aa4.2□□□□□ -1.74
VPS13A-211ENST00000484581 PKD2L2Q9NZM6 624 aa4.2□□□□□ -1.74
VPS13A-211ENST00000484581 UBQLN2Q9UHD9 624 aa4.2□□□□□ -1.74
VPS13A-211ENST00000484581 DAPK2Q9UIK4 370 aa4.2□□□□□ -1.74
VPS13A-211ENST00000484581 RUVBL2Q9Y230 463 aaKnown RBP4.2□□□□□ -1.74
VPS13A-211ENST00000484581 CLCA3PQ9Y6N3 262 aa4.2□□□□□ -1.74
VPS13A-211ENST00000484581 AP1M2Q9Y6Q5 423 aa4.2□□□□□ -1.74
VPS13A-211ENST00000484581 IGLV5-37A0A075B6J1 123 aa4.19□□□□□ -1.74
VPS13A-211ENST00000484581 IGKV2D-30A0A075B6S6 120 aa4.19□□□□□ -1.74
VPS13A-211ENST00000484581 ARHGAP42A6NI28 874 aa4.19□□□□□ -1.74
VPS13A-211ENST00000484581 C17orf105B2RV13 164 aa4.19□□□□□ -1.74
VPS13A-211ENST00000484581 K7EPI3 171 aa4.19□□□□□ -1.74
VPS13A-211ENST00000484581 O00370 1275 aa4.19□□□□□ -1.74
VPS13A-211ENST00000484581 RASGRF2O14827 1237 aa4.19□□□□□ -1.74
VPS13A-211ENST00000484581 NOL3O60936 208 aaKnown RBP4.19□□□□□ -1.74
VPS13A-211ENST00000484581 PMS2P2O95744 297 aa4.19□□□□□ -1.74
VPS13A-211ENST00000484581 FERP16591 822 aa4.19□□□□□ -1.74
VPS13A-211ENST00000484581 ACP1P24666 158 aa4.19□□□□□ -1.74
VPS13A-211ENST00000484581 CDKN1AP38936 164 aa4.19□□□□□ -1.74
VPS13A-211ENST00000484581 SMSP52788 366 aa4.19□□□□□ -1.74
VPS13A-211ENST00000484581 PGGT1BP53609 377 aa4.19□□□□□ -1.74
VPS13A-211ENST00000484581 RELQ04864 619 aaPredicted RBP4.19□□□□□ -1.74
VPS13A-211ENST00000484581 SLC34A1Q06495 639 aa4.19□□□□□ -1.74
VPS13A-211ENST00000484581 DMPKQ09013 629 aa4.19□□□□□ -1.74
VPS13A-211ENST00000484581 KLHL30Q0D2K2 578 aa4.19□□□□□ -1.74
VPS13A-211ENST00000484581 RASGEF1BQ0VAM2 473 aa4.19□□□□□ -1.74
VPS13A-211ENST00000484581 MYBPHQ13203 477 aa4.19□□□□□ -1.74
VPS13A-211ENST00000484581 NFATC4Q14934 902 aa4.19□□□□□ -1.74
VPS13A-211ENST00000484581 NONOQ15233 471 aaKnown RBP eCLIP4.19□□□□□ -1.74
VPS13A-211ENST00000484581 TWIST1Q15672 202 aa4.19□□□□□ -1.74
VPS13A-211ENST00000484581 UGP2Q16851 508 aa4.19□□□□□ -1.74
VPS13A-211ENST00000484581 HSP90AA5PQ58FG0 334 aa4.19□□□□□ -1.74
VPS13A-211ENST00000484581 AGAP6Q5VW22 663 aa4.19□□□□□ -1.74
VPS13A-211ENST00000484581 PM20D1Q6GTS8 502 aa4.19□□□□□ -1.74
VPS13A-211ENST00000484581 OR4A47Q6IF82 309 aa4.19□□□□□ -1.74
VPS13A-211ENST00000484581 KLHL10Q6JEL2 608 aa4.19□□□□□ -1.74
VPS13A-211ENST00000484581 ZCCHC12Q6PEW1 402 aa4.19□□□□□ -1.74
VPS13A-211ENST00000484581 RHBDF2Q6PJF5 856 aa4.19□□□□□ -1.74
VPS13A-211ENST00000484581 B3GLCTQ6Y288 498 aa4.19□□□□□ -1.74
VPS13A-211ENST00000484581 ASPGQ86U10 573 aa4.19□□□□□ -1.74
VPS13A-211ENST00000484581 TMEM126BQ8IUX1 230 aa4.19□□□□□ -1.74
VPS13A-211ENST00000484581 NRACQ8N912 160 aa4.19□□□□□ -1.74
VPS13A-211ENST00000484581 OR11H4Q8NGC9 324 aa4.19□□□□□ -1.74
VPS13A-211ENST00000484581 PIGBQ92521 554 aa4.19□□□□□ -1.74
VPS13A-211ENST00000484581 SYAP1Q96A49 352 aaPredicted RBP4.19□□□□□ -1.74
VPS13A-211ENST00000484581 MRPL38Q96DV4 380 aaKnown RBP4.19□□□□□ -1.74
VPS13A-211ENST00000484581 SAMD8Q96LT4 415 aa4.19□□□□□ -1.74
VPS13A-211ENST00000484581 NSMCE2Q96MF7 247 aa4.19□□□□□ -1.74
VPS13A-211ENST00000484581 NAP1L5Q96NT1 182 aaPredicted RBP4.19□□□□□ -1.74
VPS13A-211ENST00000484581 TSSK2Q96PF2 358 aa4.19□□□□□ -1.74
VPS13A-211ENST00000484581 ZNF385AQ96PM9 386 aaKnown RBP4.19□□□□□ -1.74
VPS13A-211ENST00000484581 MIS12Q9H081 205 aa4.19□□□□□ -1.74
VPS13A-211ENST00000484581 ZMYND12Q9H0C1 365 aa4.19□□□□□ -1.74
VPS13A-211ENST00000484581 KCNN3Q9UGI6 736 aa4.19□□□□□ -1.74
VPS13A-211ENST00000484581 MYO6Q9UM54 1294 aa4.19□□□□□ -1.74
VPS13A-211ENST00000484581 VDAC3Q9Y277 283 aa4.19□□□□□ -1.74
VPS13A-211ENST00000484581 A0A0G2JPF8 293 aa4.18□□□□□ -1.74
VPS13A-211ENST00000484581 CTAGE9A4FU28 777 aa4.18□□□□□ -1.74
VPS13A-211ENST00000484581 CFAP73A6NFT4 308 aa4.18□□□□□ -1.74
VPS13A-211ENST00000484581 HNRNPCL3B7ZW38 293 aa4.18□□□□□ -1.74
VPS13A-211ENST00000484581 ZNF587BE7ETH6 402 aa4.18□□□□□ -1.74
VPS13A-211ENST00000484581 NPIPA3F8WFD2 350 aa4.18□□□□□ -1.74
VPS13A-211ENST00000484581 TLR4O00206 839 aa4.18□□□□□ -1.74
VPS13A-211ENST00000484581 SCO2O43819 266 aa4.18□□□□□ -1.74
VPS13A-211ENST00000484581 HSF2BPO75031 334 aa4.18□□□□□ -1.74
VPS13A-211ENST00000484581 TOMM40O96008 361 aa4.18□□□□□ -1.74
VPS13A-211ENST00000484581 MT-ATP6P00846 226 aa4.18□□□□□ -1.74
VPS13A-211ENST00000484581 PDGFBP01127 241 aaPredicted RBP4.18□□□□□ -1.74
VPS13A-211ENST00000484581 TGFAP01135 160 aa4.18□□□□□ -1.74
VPS13A-211ENST00000484581 IGHDP01880 384 aa4.18□□□□□ -1.74
VPS13A-211ENST00000484581 HOXC6P09630 235 aa4.18□□□□□ -1.74
VPS13A-211ENST00000484581 SP9P0CG40 484 aa4.18□□□□□ -1.74
VPS13A-211ENST00000484581 CTAGE8P0CG41 777 aa4.18□□□□□ -1.74
VPS13A-211ENST00000484581 HNRNPCL4P0DMR1 293 aa4.18□□□□□ -1.74
VPS13A-211ENST00000484581 GHRP10912 638 aa4.18□□□□□ -1.74
VPS13A-211ENST00000484581 HLA-DOBP13765 273 aa4.18□□□□□ -1.74
VPS13A-211ENST00000484581 UGT1A6P19224 532 aa4.18□□□□□ -1.74
VPS13A-211ENST00000484581 ACAA2P42765 397 aaKnown RBP4.18□□□□□ -1.74
VPS13A-211ENST00000484581 GLIPR1P48060 266 aa4.18□□□□□ -1.74
VPS13A-211ENST00000484581 LCP2Q13094 533 aa4.18□□□□□ -1.74
VPS13A-211ENST00000484581 CCDC40Q4G0X9 1142 aa4.18□□□□□ -1.74
VPS13A-211ENST00000484581 TMEM139Q8IV31 216 aa4.18□□□□□ -1.74
VPS13A-211ENST00000484581 LAX1Q8IWV1 398 aa4.18□□□□□ -1.74
VPS13A-211ENST00000484581 CTAGE4Q8IX94 777 aa4.18□□□□□ -1.74
VPS13A-211ENST00000484581 LGI2Q8N0V4 545 aa4.18□□□□□ -1.74
VPS13A-211ENST00000484581 CCDC63Q8NA47 563 aa4.18□□□□□ -1.74
VPS13A-211ENST00000484581 CCNYQ8ND76 341 aa4.18□□□□□ -1.74
VPS13A-211ENST00000484581 ZNF540Q8NDQ6 660 aa4.18□□□□□ -1.74
VPS13A-211ENST00000484581 CCDC110Q8TBZ0 833 aa4.18□□□□□ -1.74
VPS13A-211ENST00000484581 TSACCQ96A04 125 aaPredicted RBP4.18□□□□□ -1.74
VPS13A-211ENST00000484581 SLCO4A1Q96BD0 722 aa4.18□□□□□ -1.74
VPS13A-211ENST00000484581 C14orf79Q96F83 325 aa4.18□□□□□ -1.74
VPS13A-211ENST00000484581 LINGO1Q96FE5 620 aa4.18□□□□□ -1.74
VPS13A-211ENST00000484581 MAP3K3Q99759 626 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms