RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 LHX5Q9H2C1 402 aa6.42□□□□□ -1.38
CLK1-212ENST00000482590 GAREM1Q9H706 876 aa6.42□□□□□ -1.38
CLK1-212ENST00000482590 LRRC4Q9HBW1 653 aa6.42□□□□□ -1.38
CLK1-212ENST00000482590 CISHQ9NSE2 258 aa6.42□□□□□ -1.38
CLK1-212ENST00000482590 LIN7CQ9NUP9 197 aaKnown RBP6.42□□□□□ -1.38
CLK1-212ENST00000482590 ATAD3AQ9NVI7 634 aa6.42□□□□□ -1.38
CLK1-212ENST00000482590 DDX18Q9NVP1 670 aaKnown RBP6.42□□□□□ -1.38
CLK1-212ENST00000482590 RLIMQ9NVW2 624 aa6.42□□□□□ -1.38
CLK1-212ENST00000482590 NMRK1Q9NWW6 199 aa6.42□□□□□ -1.38
CLK1-212ENST00000482590 RAB20Q9NX57 234 aa6.42□□□□□ -1.38
CLK1-212ENST00000482590 CHCHD3Q9NX63 227 aaKnown RBP6.42□□□□□ -1.38
CLK1-212ENST00000482590 ELOVL2Q9NXB9 296 aa6.42□□□□□ -1.38
CLK1-212ENST00000482590 SH3BP4Q9P0V3 963 aa6.42□□□□□ -1.38
CLK1-212ENST00000482590 RCOR1Q9UKL0 485 aa6.42□□□□□ -1.38
CLK1-212ENST00000482590 TSPAN16Q9UKR8 245 aa6.42□□□□□ -1.38
CLK1-212ENST00000482590 AGO1Q9UL18 857 aaKnown RBP6.42□□□□□ -1.38
CLK1-212ENST00000482590 PADI1Q9ULC6 663 aa6.42□□□□□ -1.38
CLK1-212ENST00000482590 HPSEQ9Y251 543 aa6.42□□□□□ -1.38
CLK1-212ENST00000482590 CHKBQ9Y259 395 aa6.42□□□□□ -1.38
CLK1-212ENST00000482590 ITM2BQ9Y287 266 aa6.42□□□□□ -1.38
CLK1-212ENST00000482590 NEU2Q9Y3R4 380 aa6.42□□□□□ -1.38
CLK1-212ENST00000482590 NFE2L3Q9Y4A8 694 aa6.42□□□□□ -1.38
CLK1-212ENST00000482590 NFS1Q9Y697 457 aa6.42□□□□□ -1.38
CLK1-212ENST00000482590 DOCK4Q8N1I0 1966 aa6.42□□□□□ -1.38
CLK1-212ENST00000482590 FASNP49327 2511 aaKnown RBP6.41□□□□□ -1.38
CLK1-212ENST00000482590 CCDC187A0A096LP49 1063 aa6.41□□□□□ -1.38
CLK1-212ENST00000482590 C16orf96A6NNT2 1141 aa6.41□□□□□ -1.38
CLK1-212ENST00000482590 KCNJ18B7U540 433 aa6.41□□□□□ -1.38
CLK1-212ENST00000482590 O00370 1275 aa6.41□□□□□ -1.38
CLK1-212ENST00000482590 XPO1O14980 1071 aaKnown RBP6.41□□□□□ -1.38
CLK1-212ENST00000482590 LETM1O95202 739 aaPredicted RBP6.41□□□□□ -1.38
CLK1-212ENST00000482590 LATS1O95835 1130 aa6.41□□□□□ -1.38
CLK1-212ENST00000482590 KLKB1P03952 638 aa6.41□□□□□ -1.38
CLK1-212ENST00000482590 ZNF883P0CG24 379 aa6.41□□□□□ -1.38
CLK1-212ENST00000482590 HLA-EP13747 358 aa6.41□□□□□ -1.38
CLK1-212ENST00000482590 CCT8P50990 548 aa6.41□□□□□ -1.38
CLK1-212ENST00000482590 BMXP51813 675 aa6.41□□□□□ -1.38
CLK1-212ENST00000482590 NDUFA8P51970 172 aa6.41□□□□□ -1.38
CLK1-212ENST00000482590 STX1BP61266 288 aa6.41□□□□□ -1.38
CLK1-212ENST00000482590 UFM1P61960 85 aa6.41□□□□□ -1.38
CLK1-212ENST00000482590 OLR1P78380 273 aa6.41□□□□□ -1.38
CLK1-212ENST00000482590 TRA2AQ13595 282 aaKnown RBP eCLIP6.41□□□□□ -1.382e-9■■■■□ 22.8
CLK1-212ENST00000482590 CUL2Q13617 745 aa6.41□□□□□ -1.38
CLK1-212ENST00000482590 TP53BP2Q13625 1128 aa6.41□□□□□ -1.38
CLK1-212ENST00000482590 ENPP2Q13822 863 aa6.41□□□□□ -1.38
CLK1-212ENST00000482590 BOP1Q14137 746 aaKnown RBP6.41□□□□□ -1.38
CLK1-212ENST00000482590 KCNJ12Q14500 433 aa6.41□□□□□ -1.38
CLK1-212ENST00000482590 KCNAB1Q14722 419 aa6.41□□□□□ -1.38
CLK1-212ENST00000482590 INSCQ1MX18 579 aa6.41□□□□□ -1.38
CLK1-212ENST00000482590 EDRF1Q3B7T1 1238 aa6.41□□□□□ -1.38
CLK1-212ENST00000482590 TBRG1Q3YBR2 411 aa6.41□□□□□ -1.38
CLK1-212ENST00000482590 ARHGAP17Q68EM7 881 aa6.41□□□□□ -1.38
CLK1-212ENST00000482590 ETFRF1Q6IPR1 90 aa6.41□□□□□ -1.38
CLK1-212ENST00000482590 CDC73Q6P1J9 531 aa6.41□□□□□ -1.38
CLK1-212ENST00000482590 TMEM270Q6UE05 265 aa6.41□□□□□ -1.38
CLK1-212ENST00000482590 GBP6Q6ZN66 633 aa6.41□□□□□ -1.38
CLK1-212ENST00000482590 TRABD2AQ86V40 505 aa6.41□□□□□ -1.38
CLK1-212ENST00000482590 HOOK3Q86VS8 718 aa6.41□□□□□ -1.38
CLK1-212ENST00000482590 PNPLA1Q8N8W4 532 aa6.41□□□□□ -1.38
CLK1-212ENST00000482590 ZNF557Q8N988 423 aaPredicted RBP6.41□□□□□ -1.38
CLK1-212ENST00000482590 DRAXINQ8NBI3 349 aaPredicted RBP6.41□□□□□ -1.38
CLK1-212ENST00000482590 FAM98AQ8NCA5 519 aaKnown RBP6.41□□□□□ -1.38
CLK1-212ENST00000482590 TMEM116Q8NCL8 245 aa6.41□□□□□ -1.38
CLK1-212ENST00000482590 OR6C4Q8NGE1 309 aa6.41□□□□□ -1.38
CLK1-212ENST00000482590 OR56B2PQ8NGI1 322 aa6.41□□□□□ -1.38
CLK1-212ENST00000482590 RFWD2Q8NHY2 731 aa6.41□□□□□ -1.38
CLK1-212ENST00000482590 SLC13A3Q8WWT9 602 aa6.41□□□□□ -1.38
CLK1-212ENST00000482590 CASKIN2Q8WXE0 1202 aa6.41□□□□□ -1.38
CLK1-212ENST00000482590 ADAMTS14Q8WXS8 1223 aa6.41□□□□□ -1.38
CLK1-212ENST00000482590 DNASE2BQ8WZ79 361 aa6.41□□□□□ -1.38
CLK1-212ENST00000482590 SAT2Q96F10 170 aaPredicted RBP6.41□□□□□ -1.38
CLK1-212ENST00000482590 ZDHHC12Q96GR4 267 aa6.41□□□□□ -1.38
CLK1-212ENST00000482590 PIWIL1Q96J94 861 aaKnown RBP6.41□□□□□ -1.38
CLK1-212ENST00000482590 CAMK1GQ96NX5 476 aa6.41□□□□□ -1.38
CLK1-212ENST00000482590 RUFY1Q96T51 708 aa6.41□□□□□ -1.38
CLK1-212ENST00000482590 NUDT22Q9BRQ3 303 aa6.41□□□□□ -1.38
CLK1-212ENST00000482590 TBCDQ9BTW9 1192 aa6.41□□□□□ -1.38
CLK1-212ENST00000482590 NUP58Q9BVL2 599 aa6.41□□□□□ -1.38
CLK1-212ENST00000482590 UBXN6Q9BZV1 441 aa6.41□□□□□ -1.38
CLK1-212ENST00000482590 SLC25A32Q9H2D1 315 aa6.41□□□□□ -1.38
CLK1-212ENST00000482590 DPH5Q9H2P9 285 aa6.41□□□□□ -1.38
CLK1-212ENST00000482590 LDAHQ9H6V9 325 aa6.41□□□□□ -1.38
CLK1-212ENST00000482590 TMEM140Q9NV12 185 aa6.41□□□□□ -1.38
CLK1-212ENST00000482590 ZNHIT6Q9NWK9 470 aaKnown RBP6.41□□□□□ -1.38
CLK1-212ENST00000482590 RMND1Q9NWS8 449 aa6.41□□□□□ -1.38
CLK1-212ENST00000482590 MPP6Q9NZW5 540 aa6.41□□□□□ -1.38
CLK1-212ENST00000482590 XPR1Q9UBH6 696 aa6.41□□□□□ -1.38
CLK1-212ENST00000482590 BAG5Q9UL15 447 aa6.41□□□□□ -1.38
CLK1-212ENST00000482590 SUFUQ9UMX1 484 aa6.41□□□□□ -1.38
CLK1-212ENST00000482590 PLA2G4CQ9UP65 541 aa6.41□□□□□ -1.38
CLK1-212ENST00000482590 HBS1LQ9Y450 684 aaKnown RBP6.41□□□□□ -1.38
CLK1-212ENST00000482590 ATP6V1DQ9Y5K8 247 aa6.41□□□□□ -1.38
CLK1-212ENST00000482590 CLCA3PQ9Y6N3 262 aa6.41□□□□□ -1.38
CLK1-212ENST00000482590 IGSF10Q6WRI0 2623 aa6.41□□□□□ -1.38
CLK1-212ENST00000482590 SYCE3A1L190 88 aa6.4□□□□□ -1.38
CLK1-212ENST00000482590 TEX22C9J3V5 150 aa6.4□□□□□ -1.38
CLK1-212ENST00000482590 SLC16A3O15427 465 aaKnown RBP6.4□□□□□ -1.38
CLK1-212ENST00000482590 SEMA4FO95754 770 aa6.4□□□□□ -1.38
CLK1-212ENST00000482590 DDAH2O95865 285 aa6.4□□□□□ -1.38
CLK1-212ENST00000482590 ONECUT2O95948 504 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms